{ "resourceType" : "StructureMap", "id" : "MeasurementMap", "language" : "en", "text" : { "status" : "generated", "div" : "

Generated Narrative: StructureMap MeasurementMap

Language: en

\r\n/// url = 'http://hl7.org/fhir/uv/omop/StructureMap/MeasurementMap'\r\n/// name = 'MeasurementMap'\r\n/// title = 'Mapping Observation resource to Measurement  OMOP Domain'\r\n/// status = 'draft'\r\n\r\nuses "http://hl7.org/fhir/StructureDefinition/Observation" alias Observation as source\r\nuses "http://hl7.org/fhir/uv/omop/StructureDefinition/Measurement" alias MeasureTable as target\r\n\r\ngroup Measures(source src : Observation, target tgt : MeasureTable) {\r\n  src where ('vital-signs' | 'laboratory').supersetOf(Observation.category.coding.code) then {\r\n    src.code as s -> tgt then {\r\n      s.coding as sc -> tgt then {\r\n        sc.code as a -> tgt.measurement_concept_id = a;\r\n      };\r\n    }; // src.id as id -> tgt.measurement_id = cast(id, "integer");\r\n    src.effective : dateTime as edt ->  tgt.measurement_datetime = edt,  tgt.measurement_date = cast(edt, 'date'); // src.subject as s -> tgt then {\r\n    src.effective : instant as einst ->  tgt.measurement_datetime = cast(einst, 'dateTime'),  tgt.measurement_date = cast(einst, 'date');\r\n    src.effective : Period as s -> tgt then {\r\n      s.start as eps ->  tgt.measurement_datetime = cast(eps, 'dateTime'),  tgt.measurement_date = cast(eps, 'date');\r\n    };\r\n    src.issued as s where (src.issued.toDate != src.effectiveDateTime) -> tgt.measurement_source_value = cast(s, 'string');\r\n    src.value : Quantity as s -> tgt then {\r\n      s.value as a -> tgt.value_as_number = a;\r\n      s.unit as b -> tgt.unit_concept_id = b;\r\n    }; // src.performer as s -> tgt then {\r\n    src.value : CodeableConcept as s -> tgt then {\r\n      s.coding as sc -> tgt then {\r\n        sc.code as a -> tgt.value_as_concept_id = a;\r\n      };\r\n    };\r\n    src.value : string as b -> tgt.value_source_value = b;\r\n    src.interpretation as c -> tgt.value_as_concept_id = c;\r\n    src.note as d -> tgt.measurement_source_value = d;\r\n  } "OnlyMeasures";\r\n}\r\n\r\n
" }, "extension" : [{ "url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-wg", "valueCode" : "brr" }, { "url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-fmm", "valueInteger" : 1, "_valueInteger" : { "extension" : [{ "url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-conformance-derivedFrom", "valueCanonical" : "http://hl7.org/fhir/uv/omop/ImplementationGuide/hl7.fhir.uv.omop" }] } }, { "url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-standards-status", "valueCode" : "informative", "_valueCode" : { "extension" : [{ "url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-conformance-derivedFrom", "valueCanonical" : "http://hl7.org/fhir/uv/omop/ImplementationGuide/hl7.fhir.uv.omop" }] } }], "url" : "http://hl7.org/fhir/uv/omop/StructureMap/MeasurementMap", "version" : "1.0.0", "name" : "MeasurementMap", "title" : "Mapping Observation resource to Measurement OMOP Domain", "status" : "draft", "date" : "2026-04-02T22:51:15+00:00", "publisher" : "HL7 International / Biomedical Research and Regulation", "contact" : [{ "name" : "HL7 International / Biomedical Research and Regulation", "telecom" : [{ "system" : "url", "value" : "http://www.hl7.org/Special/committees/rcrim" }] }], "description" : "This mapping maps FHIR Observation instances that are considered measurements to OMOP Measurement Table objects. Currently, this is done by considering the category code and mapping 'vital-signs' and 'laboratory' Observations.", "jurisdiction" : [{ "coding" : [{ "system" : "http://unstats.un.org/unsd/methods/m49/m49.htm", "code" : "001", "display" : "World" }] }], "structure" : [{ "url" : "http://hl7.org/fhir/StructureDefinition/Observation", "mode" : "source", "alias" : "Observation" }, { "url" : "http://hl7.org/fhir/uv/omop/StructureDefinition/Measurement", "mode" : "target", "alias" : "MeasureTable" }], "group" : [{ "name" : "Measures", "input" : [{ "name" : "src", "type" : "Observation", "mode" : "source" }, { "name" : "tgt", "type" : "MeasureTable", "mode" : "target" }], "rule" : [{ "name" : "OnlyMeasures", "source" : [{ "context" : "src", "condition" : "('vital-signs' | 'laboratory').supersetOf(Observation.category.coding.code)" }], "rule" : [{ "name" : "code", "source" : [{ "context" : "src", "element" : "code", "variable" : "s" }], "target" : [{ "transform" : "copy", "parameter" : [{ "valueId" : "tgt" }] }], "rule" : [{ "name" : "coding", "source" : [{ "context" : "s", "element" : "coding", "variable" : "sc" }], "target" : [{ "transform" : "copy", "parameter" : [{ "valueId" : "tgt" }] }], "rule" : [{ "name" : "code", "source" : [{ "context" : "sc", "element" : "code", "variable" : "a" }], "target" : [{ "context" : "tgt", "element" : "measurement_concept_id", "transform" : "copy", "parameter" : [{ "valueId" : "a" }] }] }] }], "documentation" : "src.id as id -> tgt.measurement_id = cast(id, \"integer\");" }, { "name" : "effectiveDateTime", "source" : [{ "context" : "src", "type" : "dateTime", "element" : "effective", "variable" : "edt" }], "target" : [{ "context" : "tgt", "element" : "measurement_datetime", "transform" : "copy", "parameter" : [{ "valueId" : "edt" }] }, { "context" : "tgt", "element" : "measurement_date", "transform" : "cast", "parameter" : [{ "valueId" : "edt" }, { "valueString" : "date" }] }], "documentation" : "src.subject as s -> tgt then {" }, { "name" : "effectiveInstant", "source" : [{ "context" : "src", "type" : "instant", "element" : "effective", "variable" : "einst" }], "target" : [{ "context" : "tgt", "element" : "measurement_datetime", "transform" : "cast", "parameter" : [{ "valueId" : "einst" }, { "valueString" : "dateTime" }] }, { "context" : "tgt", "element" : "measurement_date", "transform" : "cast", "parameter" : [{ "valueId" : "einst" }, { "valueString" : "date" }] }] }, { "name" : "effectivePeriod", "source" : [{ "context" : "src", "type" : "Period", "element" : "effective", "variable" : "s" }], "target" : [{ "transform" : "copy", "parameter" : [{ "valueId" : "tgt" }] }], "rule" : [{ "name" : "start", "source" : [{ "context" : "s", "element" : "start", "variable" : "eps" }], "target" : [{ "context" : "tgt", "element" : "measurement_datetime", "transform" : "cast", "parameter" : [{ "valueId" : "eps" }, { "valueString" : "dateTime" }] }, { "context" : "tgt", "element" : "measurement_date", "transform" : "cast", "parameter" : [{ "valueId" : "eps" }, { "valueString" : "date" }] }] }] }, { "name" : "issued", "source" : [{ "context" : "src", "element" : "issued", "variable" : "s", "condition" : "(src.issued.toDate != src.effectiveDateTime)" }], "target" : [{ "context" : "tgt", "element" : "measurement_source_value", "transform" : "cast", "parameter" : [{ "valueId" : "s" }, { "valueString" : "string" }] }] }, { "name" : "valueQuantity", "source" : [{ "context" : "src", "type" : "Quantity", "element" : "value", "variable" : "s" }], "target" : [{ "transform" : "copy", "parameter" : [{ "valueId" : "tgt" }] }], "rule" : [{ "name" : "value", "source" : [{ "context" : "s", "element" : "value", "variable" : "a" }], "target" : [{ "context" : "tgt", "element" : "value_as_number", "transform" : "copy", "parameter" : [{ "valueId" : "a" }] }] }, { "name" : "unit", "source" : [{ "context" : "s", "element" : "unit", "variable" : "b" }], "target" : [{ "context" : "tgt", "element" : "unit_concept_id", "transform" : "copy", "parameter" : [{ "valueId" : "b" }] }] }], "documentation" : "src.performer as s -> tgt then {" }, { "name" : "valueCodeableConcept", "source" : [{ "context" : "src", "type" : "CodeableConcept", "element" : "value", "variable" : "s" }], "target" : [{ "transform" : "copy", "parameter" : [{ "valueId" : "tgt" }] }], "rule" : [{ "name" : "coding", "source" : [{ "context" : "s", "element" : "coding", "variable" : "sc" }], "target" : [{ "transform" : "copy", "parameter" : [{ "valueId" : "tgt" }] }], "rule" : [{ "name" : "code", "source" : [{ "context" : "sc", "element" : "code", "variable" : "a" }], "target" : [{ "context" : "tgt", "element" : "value_as_concept_id", "transform" : "copy", "parameter" : [{ "valueId" : "a" }] }] }] }] }, { "name" : "valueString", "source" : [{ "context" : "src", "type" : "string", "element" : "value", "variable" : "b" }], "target" : [{ "context" : "tgt", "element" : "value_source_value", "transform" : "copy", "parameter" : [{ "valueId" : "b" }] }] }, { "name" : "interpretation", "source" : [{ "context" : "src", "element" : "interpretation", "variable" : "c" }], "target" : [{ "context" : "tgt", "element" : "value_as_concept_id", "transform" : "copy", "parameter" : [{ "valueId" : "c" }] }] }, { "name" : "note", "source" : [{ "context" : "src", "element" : "note", "variable" : "d" }], "target" : [{ "context" : "tgt", "element" : "measurement_source_value", "transform" : "copy", "parameter" : [{ "valueId" : "d" }] }] }] }] }] }