FHIR to OMOP FHIR IG
1.0.0-ballot - INFORMATIVE 1 - Ballot
FHIR to OMOP FHIR IG
1.0.0-ballot - INFORMATIVE 1 - Ballot
FHIR to OMOP FHIR IG, published by HL7 International / Biomedical Research and Regulation. This guide is not an authorized publication; it is the continuous build for version 1.0.0-ballot built by the FHIR (HL7® FHIR® Standard) CI Build. This version is based on the current content of https://github.com/HL7/fhir-omop-ig/ and changes regularly. See the Directory of published versions
| Page standards status: Informative | Maturity Level: 1 |
{
"resourceType" : "StructureMap",
"id" : "ConditionMap",
"text" : {
"status" : "generated",
"div" : "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p class=\"res-header-id\"><b>Generated Narrative: StructureMap ConditionMap</b></p><a name=\"ConditionMap\"> </a><a name=\"hcConditionMap\"> </a><pre class=\"fml\">\r\n<span style=\"color: #cc00cc\">/// <b>url</b> = </span><span style=\"color: blue\">'http://hl7.org/fhir/uv/omop/StructureMap/ConditionMap'</span>\r\n<span style=\"color: #cc00cc\">/// <b>name</b> = </span><span style=\"color: blue\">'ConditionMap'</span>\r\n<span style=\"color: #cc00cc\">/// <b>title</b> = </span><span style=\"color: blue\">'Mapping Condition resource to Condition Occurrence OMOP Domain'</span>\r\n<span style=\"color: #cc00cc\">/// <b>status</b> = </span><span style=\"color: blue\">'draft'</span>\r\n\r\n<b>uses</b><span style=\"color: navy\"> "</span><a href=\"http://hl7.org/fhir/R5/condition.html\" title=\"Condition\">http://hl7.org/fhir/StructureDefinition/Condition</a><span style=\"color: navy\">" </span><b>alias </b>Condition <b>as </b><b>source</b>\r\n<b>uses</b><span style=\"color: navy\"> "</span><a href=\"StructureDefinition-ConditionOccurrence.html\" title=\"Condition Occurrence OMOP Table\">http://hl7.org/fhir/uv/omop/StructureDefinition/ConditionOccurrence</a><span style=\"color: navy\">" </span><b>alias </b>ConOccTable <b>as </b><b>target</b>\r\n\r\n<b>group </b>ConditionOccurrence<span style=\"color: navy\">(</span><b>source</b> <span style=\"color: maroon\">src</span><span style=\"color: navy\"> : </span>Condition, <b>target</b> <span style=\"color: maroon\">tgt</span><span style=\"color: navy\"> : </span>ConOccTable<span style=\"color: navy\">)</span><span style=\"color: navy\"> {\r\n</span> src.code<b> as </b><span style=\"color: maroon\">s</span><span style=\"color: navy\"><b> -> </b></span><span style=\"color: maroon\">tgt</span><b> then</b><span style=\"color: navy\"> {\r\n</span> s.coding<b> as </b><span style=\"color: maroon\">sc</span><span style=\"color: navy\"><b> -> </b></span><span style=\"color: maroon\">tgt</span><b> then</b><span style=\"color: navy\"> {\r\n</span> sc.code<b> as </b><span style=\"color: maroon\">a</span><span style=\"color: navy\"><b> -> </b></span>tgt.condition_concept_id = <span style=\"color: maroon\">a</span><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span><span style=\"color: navy\">;</span> <span style=\"color: navy\">// </span><span style=\"color: green\">src.id as id -> tgt.condition_occurrence_id = cast(id, "integer");</span>\r\n src.recordedDate<b> as </b><span style=\"color: maroon\">rd</span><span style=\"color: navy\"><b> -> </b></span> tgt.condition_start_datetime = <b>cast</b><span style=\"color: navy\">(</span><span style=\"color: maroon\">rd</span><span style=\"color: navy\">, </span><span style=\"color: blue\">'dateTime'</span><span style=\"color: navy\">)</span><span style=\"color: navy\">, </span> tgt.condition_start_date = <span style=\"color: maroon\">rd</span><span style=\"color: navy\">;</span>\r\n src.onset<span style=\"color: navy\"> : </span>dateTime<b> as </b><span style=\"color: maroon\">osd</span><span style=\"color: navy\"><b> -> </b></span> tgt.condition_start_datetime = <span style=\"color: maroon\">osd</span><span style=\"color: navy\">, </span> tgt.condition_start_date = <b>cast</b><span style=\"color: navy\">(</span><span style=\"color: maroon\">osd</span><span style=\"color: navy\">, </span><span style=\"color: blue\">'date'</span><span style=\"color: navy\">)</span><span style=\"color: navy\">;</span>\r\n src.abatement<span style=\"color: navy\"> : </span>dateTime<b> as </b><span style=\"color: maroon\">abdt</span><span style=\"color: navy\"><b> -> </b></span> tgt.condition_end_datetime = <span style=\"color: maroon\">adt</span><span style=\"color: navy\">, </span> tgt.condition_end_date = <b>cast</b><span style=\"color: navy\">(</span><span style=\"color: maroon\">abdt</span><span style=\"color: navy\">, </span><span style=\"color: blue\">'date'</span><span style=\"color: navy\">)</span><span style=\"color: navy\">;</span>\r\n src.category<b> as </b><span style=\"color: maroon\">s</span><span style=\"color: navy\"><b> -> </b></span><span style=\"color: maroon\">tgt</span><b> then</b><span style=\"color: navy\"> {\r\n</span> s.coding<b> as </b><span style=\"color: maroon\">sc</span><span style=\"color: navy\"><b> -> </b></span><span style=\"color: maroon\">tgt</span><b> then</b><span style=\"color: navy\"> {\r\n</span> sc.code<b> as </b><span style=\"color: maroon\">a</span><span style=\"color: navy\"><b> -> </b></span>tgt.condition_type_concept_id = <span style=\"color: maroon\">a</span><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span><span style=\"color: navy\">;</span>\r\n src.clinicalStatus<b> as </b><span style=\"color: maroon\">s</span><span style=\"color: navy\"><b> -> </b></span><span style=\"color: maroon\">tgt</span><b> then</b><span style=\"color: navy\"> {\r\n</span> s.coding<b> as </b><span style=\"color: maroon\">sc</span><span style=\"color: navy\"><b> -> </b></span><span style=\"color: maroon\">tgt</span><b> then</b><span style=\"color: navy\"> {\r\n</span> sc.code<b> as </b><span style=\"color: maroon\">a</span><span style=\"color: navy\"><b> -> </b></span>tgt.condition_status_concept_id = <span style=\"color: maroon\">a</span><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span><span style=\"color: navy\">;</span>\r\n src.evidence<b> as </b><span style=\"color: maroon\">s</span><span style=\"color: navy\"><b> -> </b></span><span style=\"color: maroon\">tgt</span><b> then</b><span style=\"color: navy\"> {\r\n</span> s.concept<b> as </b><span style=\"color: maroon\">sc</span><span style=\"color: navy\"><b> -> </b></span><span style=\"color: maroon\">tgt</span><b> then</b><span style=\"color: navy\"> {\r\n</span> sc.coding<b> as </b><span style=\"color: maroon\">sci</span><span style=\"color: navy\"><b> -> </b></span><span style=\"color: maroon\">tgt</span><b> then</b><span style=\"color: navy\"> {\r\n</span> sci.code<b> as </b><span style=\"color: maroon\">a</span><span style=\"color: navy\"><b> -> </b></span>tgt.condition_source_concept_id = <span style=\"color: maroon\">a</span><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span><span style=\"color: navy\">;</span> <span style=\"color: navy\">// </span><span style=\"color: green\">src.encounter as s -> tgt then {</span>\r\n<span style=\"color: navy\">}\r\n\r\n</span></pre></div>"
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"valueCode" : "brr"
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"version" : "1.0.0-ballot",
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"title" : "Mapping Condition resource to Condition Occurrence OMOP Domain",
"status" : "draft",
"date" : "2025-07-29T17:40:15+00:00",
"publisher" : "HL7 International / Biomedical Research and Regulation",
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IG © 2023+ HL7 International / Biomedical Research and Regulation. Package hl7.fhir.uv.omop#1.0.0-ballot based on FHIR 5.0.0. Generated 2025-07-29
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