FHIR to OMOP FHIR IG
0.1.0 - ci-build International flag

FHIR to OMOP FHIR IG, published by HL7 International / Biomedical Research and Regulation. This guide is not an authorized publication; it is the continuous build for version 0.1.0 built by the FHIR (HL7® FHIR® Standard) CI Build. This version is based on the current content of https://github.com/HL7/fhir-omop-ig/ and changes regularly. See the Directory of published versions

Logical Model: Note NLP OMOP Table

Official URL: http://hl7.org/fhir/uv/omop/StructureDefinition/NoteNLP Version: 0.1.0
Standards status: Draft Maturity Level: 1 Computable Name: NoteNLP

The NOTE_NLP table encodes all output of NLP on clinical notes. Each row represents a single extracted term from a note.

Usage:

  • This Logical Model Profile is not used by any profiles in this Implementation Guide

Formal Views of Profile Content

Description of Profiles, Differentials, Snapshots and how the different presentations work.

This structure is derived from Base

NameFlagsCard.TypeDescription & Constraintsdoco
.. NoteNLP 0..* Base Note NLP OMOP Table
Instances of this logical model are not marked to be the target of a Reference
... note_nlp_id 1..1 code Note NLP Identifier
... note_id 1..1 Reference(Note OMOP Table) Note
... section_concept_id 0..1 code Section
... offset 0..1 string Offset
... lexical_variant 1..1 string Lexical Variant
... note_nlp_concept_id 0..1 code Note NLP
... note_nlp_source_concept_id 0..1 code Note NLP Source
... nlp_system 0..1 string NLP System
... nlp_date 1..1 date NLP Date
... nlp_datetime 0..1 dateTime NLP Datetime
... term_exists 0..1 string Term Exists
... term_temporal 0..1 string Term Temporal
... term_modifiers 0..1 string Term Modifiers

doco Documentation for this format
NameFlagsCard.TypeDescription & Constraintsdoco
.. NoteNLP 0..* Base Note NLP OMOP Table
Instances of this logical model are not marked to be the target of a Reference
... note_nlp_id 1..1 code Note NLP Identifier
... note_id 1..1 Reference(Note OMOP Table) Note
... section_concept_id 0..1 code Section
... offset 0..1 string Offset
... lexical_variant 1..1 string Lexical Variant
... note_nlp_concept_id 0..1 code Note NLP
... note_nlp_source_concept_id 0..1 code Note NLP Source
... nlp_system 0..1 string NLP System
... nlp_date 1..1 date NLP Date
... nlp_datetime 0..1 dateTime NLP Datetime
... term_exists 0..1 string Term Exists
... term_temporal 0..1 string Term Temporal
... term_modifiers 0..1 string Term Modifiers

doco Documentation for this format
NameFlagsCard.TypeDescription & Constraintsdoco
.. NoteNLP 0..* Base Note NLP OMOP Table
Instances of this logical model are not marked to be the target of a Reference
... note_nlp_id 1..1 code Note NLP Identifier
... note_id 1..1 Reference(Note OMOP Table) Note
... section_concept_id 0..1 code Section
... offset 0..1 string Offset
... lexical_variant 1..1 string Lexical Variant
... note_nlp_concept_id 0..1 code Note NLP
... note_nlp_source_concept_id 0..1 code Note NLP Source
... nlp_system 0..1 string NLP System
... nlp_date 1..1 date NLP Date
... nlp_datetime 0..1 dateTime NLP Datetime
... term_exists 0..1 string Term Exists
... term_temporal 0..1 string Term Temporal
... term_modifiers 0..1 string Term Modifiers

doco Documentation for this format

This structure is derived from Base

Summary

Mandatory: 0 element(4 nested mandatory elements)

Structures

This structure refers to these other structures:

Maturity: 1

Differential View

This structure is derived from Base

NameFlagsCard.TypeDescription & Constraintsdoco
.. NoteNLP 0..* Base Note NLP OMOP Table
Instances of this logical model are not marked to be the target of a Reference
... note_nlp_id 1..1 code Note NLP Identifier
... note_id 1..1 Reference(Note OMOP Table) Note
... section_concept_id 0..1 code Section
... offset 0..1 string Offset
... lexical_variant 1..1 string Lexical Variant
... note_nlp_concept_id 0..1 code Note NLP
... note_nlp_source_concept_id 0..1 code Note NLP Source
... nlp_system 0..1 string NLP System
... nlp_date 1..1 date NLP Date
... nlp_datetime 0..1 dateTime NLP Datetime
... term_exists 0..1 string Term Exists
... term_temporal 0..1 string Term Temporal
... term_modifiers 0..1 string Term Modifiers

doco Documentation for this format

Key Elements View

NameFlagsCard.TypeDescription & Constraintsdoco
.. NoteNLP 0..* Base Note NLP OMOP Table
Instances of this logical model are not marked to be the target of a Reference
... note_nlp_id 1..1 code Note NLP Identifier
... note_id 1..1 Reference(Note OMOP Table) Note
... section_concept_id 0..1 code Section
... offset 0..1 string Offset
... lexical_variant 1..1 string Lexical Variant
... note_nlp_concept_id 0..1 code Note NLP
... note_nlp_source_concept_id 0..1 code Note NLP Source
... nlp_system 0..1 string NLP System
... nlp_date 1..1 date NLP Date
... nlp_datetime 0..1 dateTime NLP Datetime
... term_exists 0..1 string Term Exists
... term_temporal 0..1 string Term Temporal
... term_modifiers 0..1 string Term Modifiers

doco Documentation for this format

Snapshot View

NameFlagsCard.TypeDescription & Constraintsdoco
.. NoteNLP 0..* Base Note NLP OMOP Table
Instances of this logical model are not marked to be the target of a Reference
... note_nlp_id 1..1 code Note NLP Identifier
... note_id 1..1 Reference(Note OMOP Table) Note
... section_concept_id 0..1 code Section
... offset 0..1 string Offset
... lexical_variant 1..1 string Lexical Variant
... note_nlp_concept_id 0..1 code Note NLP
... note_nlp_source_concept_id 0..1 code Note NLP Source
... nlp_system 0..1 string NLP System
... nlp_date 1..1 date NLP Date
... nlp_datetime 0..1 dateTime NLP Datetime
... term_exists 0..1 string Term Exists
... term_temporal 0..1 string Term Temporal
... term_modifiers 0..1 string Term Modifiers

doco Documentation for this format

This structure is derived from Base

Summary

Mandatory: 0 element(4 nested mandatory elements)

Structures

This structure refers to these other structures:

Maturity: 1

 

Other representations of profile: CSV, Excel