FHIR to OMOP FHIR IG, published by HL7 International / Biomedical Research and Regulation. This guide is not an authorized publication; it is the continuous build for version 0.1.0 built by the FHIR (HL7® FHIR® Standard) CI Build. This version is based on the current content of https://github.com/HL7/fhir-omop-ig/ and changes regularly. See the Directory of published versions
Page standards status: Draft | Maturity Level: 1 |
Definitions for the ConditionOccurrence logical model.
Guidance on how to interpret the contents of this table can be found here
0. ConditionOccurrence | |
Definition | This table contains records of Events of a Person suggesting the presence of a disease or medical condition stated as a diagnosis, a sign, or a symptom, which is either observed by a Provider or reported by the patient. |
Short | Condition Occurrence OMOP Table |
Logical Model | Instances of this logical model are not marked to be the target of a Reference |
2. ConditionOccurrence.condition-occurrence-id | |
Definition | The unique key given to a condition record for a person. Refer to the ETL for how duplicate conditions during the same visit were handled. |
Short | Condition Occurence Identifier |
Control | 1..1 |
Type | integer |
Primitive Value | This primitive element may be present, or absent, or replaced by an extension |
4. ConditionOccurrence.person-id | |
Definition | The PERSON_ID of the PERSON for whom the condition is recorded. |
Short | Person |
Control | 1..1 |
Type | Reference(Person OMOP Table) |
6. ConditionOccurrence.condition-concept-id | |
Definition | The CONDITION_CONCEPT_ID field is recommended for primary use in analyses, and must be used for network studies. This is the standard concept mapped from the source value which represents a condition |
Short | Condition |
Control | 1..1 |
Type | code |
Primitive Value | This primitive element may be present, or absent, or replaced by an extension |
8. ConditionOccurrence.condition-start-date | |
Definition | Use this date to determine the start date of the condition |
Short | Condition Start Date |
Control | 1..1 |
Type | date |
Primitive Value | This primitive element may be present, or absent, or replaced by an extension |
10. ConditionOccurrence.condition-start-datetime | |
Definition | Condition Start Datetime |
Short | Condition Start Datetime |
Control | 0..1 |
Type | dateTime |
Primitive Value | This primitive element may be present, or absent, or replaced by an extension |
12. ConditionOccurrence.condition-end-date | |
Definition | Use this date to determine the end date of the condition |
Short | Condition End Date |
Control | 0..1 |
Type | date |
Primitive Value | This primitive element may be present, or absent, or replaced by an extension |
14. ConditionOccurrence.condition-end-datetime | |
Definition | Condition End Datetime |
Short | Condition End Datetime |
Control | 0..1 |
Type | dateTime |
Primitive Value | This primitive element may be present, or absent, or replaced by an extension |
16. ConditionOccurrence.condition-type-concept-id | |
Definition | This field can be used to determine the provenance of the Condition record, as in whether the condition was from an EHR system, insurance claim, registry, or other sources. |
Short | Condition Type |
Control | 1..1 |
Type | code |
Primitive Value | This primitive element may be present, or absent, or replaced by an extension |
18. ConditionOccurrence.condition-status-concept-id | |
Definition | This concept represents the point during the visit the diagnosis was given (admitting diagnosis, final diagnosis), whether the diagnosis was determined due to laboratory findings, if the diagnosis was exclusionary, or if it was a preliminary diagnosis, among others. |
Short | Condition Status |
Control | 0..1 |
Type | code |
Primitive Value | This primitive element may be present, or absent, or replaced by an extension |
20. ConditionOccurrence.stop-reason | |
Definition | The Stop Reason indicates why a Condition is no longer valid with respect to the purpose within the source data. Note that a Stop Reason does not necessarily imply that the condition is no longer occurring. |
Short | Stop Reason |
Control | 0..1 |
Type | string |
Primitive Value | This primitive element may be present, or absent, or replaced by an extension |
22. ConditionOccurrence.provider-id | |
Definition | The provider associated with condition record, e.g. the provider who made the diagnosis or the provider who recorded the symptom. |
Short | Provider |
Control | 0..1 |
Type | Reference(Provider OMOP Table) |
24. ConditionOccurrence.visit-occurrence-id | |
Definition | The visit during which the condition occurred. |
Short | Visit Occurrence |
Control | 0..1 |
Type | Reference(Visit Occurrence OMOP Table) |
26. ConditionOccurrence.visit-detail-id | |
Definition | The VISIT_DETAIL record during which the condition occurred. For example, if the person was in the ICU at the time of the diagnosis the VISIT_OCCURRENCE record would reflect the overall hospital stay and the VISIT_DETAIL record would reflect the ICU stay during the hospital visit. |
Short | Visit Detail |
Control | 0..1 |
Type | Reference(Visit Detail OMOP Table) |
28. ConditionOccurrence.condition-source-value | |
Definition | This field houses the verbatim value from the source data representing the condition that occurred. For example, this could be an ICD10 or Read code. |
Short | Condition Source Value |
Control | 0..1 |
Type | string |
Primitive Value | This primitive element may be present, or absent, or replaced by an extension |
30. ConditionOccurrence.condition-source-concept-id | |
Definition | This is the concept representing the condition source value and may not necessarily be standard. This field is discouraged from use in analysis because it is not required to contain Standard Concepts that are used across the OHDSI community, and should only be used when Standard Concepts do not adequately represent the source detail for the Condition necessary for a given analytic use case. Consider using CONDITION_CONCEPT_ID instead to enable standardized analytics that can be consistent across the network. |
Short | Condition Source Concept |
Control | 0..1 |
Type | code |
Primitive Value | This primitive element may be present, or absent, or replaced by an extension |
32. ConditionOccurrence.condition-status-source-value | |
Definition | This field houses the verbatim value from the source data representing the condition status. |
Short | Condition Status Source Value |
Control | 0..1 |
Type | string |
Primitive Value | This primitive element may be present, or absent, or replaced by an extension |
Guidance on how to interpret the contents of this table can be found here
0. ConditionOccurrence | |
Definition | This table contains records of Events of a Person suggesting the presence of a disease or medical condition stated as a diagnosis, a sign, or a symptom, which is either observed by a Provider or reported by the patient. Base definition for all types defined in FHIR type system. |
Short | Condition Occurrence OMOP TableBase for all types and resources |
Control | 0..* |
Is Modifier | false |
Logical Model | Instances of this logical model are not marked to be the target of a Reference |
2. ConditionOccurrence.condition-occurrence-id | |
Definition | The unique key given to a condition record for a person. Refer to the ETL for how duplicate conditions during the same visit were handled. |
Short | Condition Occurence Identifier |
Control | 1..1 |
Type | integer |
Primitive Value | This primitive element may be present, or absent, or replaced by an extension |
4. ConditionOccurrence.person-id | |
Definition | The PERSON_ID of the PERSON for whom the condition is recorded. |
Short | Person |
Control | 1..1 |
Type | Reference(Person OMOP Table) |
6. ConditionOccurrence.condition-concept-id | |
Definition | The CONDITION_CONCEPT_ID field is recommended for primary use in analyses, and must be used for network studies. This is the standard concept mapped from the source value which represents a condition |
Short | Condition |
Control | 1..1 |
Type | code |
Primitive Value | This primitive element may be present, or absent, or replaced by an extension |
8. ConditionOccurrence.condition-start-date | |
Definition | Use this date to determine the start date of the condition |
Short | Condition Start Date |
Control | 1..1 |
Type | date |
Primitive Value | This primitive element may be present, or absent, or replaced by an extension |
10. ConditionOccurrence.condition-start-datetime | |
Definition | Condition Start Datetime |
Short | Condition Start Datetime |
Control | 0..1 |
Type | dateTime |
Primitive Value | This primitive element may be present, or absent, or replaced by an extension |
12. ConditionOccurrence.condition-end-date | |
Definition | Use this date to determine the end date of the condition |
Short | Condition End Date |
Control | 0..1 |
Type | date |
Primitive Value | This primitive element may be present, or absent, or replaced by an extension |
14. ConditionOccurrence.condition-end-datetime | |
Definition | Condition End Datetime |
Short | Condition End Datetime |
Control | 0..1 |
Type | dateTime |
Primitive Value | This primitive element may be present, or absent, or replaced by an extension |
16. ConditionOccurrence.condition-type-concept-id | |
Definition | This field can be used to determine the provenance of the Condition record, as in whether the condition was from an EHR system, insurance claim, registry, or other sources. |
Short | Condition Type |
Control | 1..1 |
Type | code |
Primitive Value | This primitive element may be present, or absent, or replaced by an extension |
18. ConditionOccurrence.condition-status-concept-id | |
Definition | This concept represents the point during the visit the diagnosis was given (admitting diagnosis, final diagnosis), whether the diagnosis was determined due to laboratory findings, if the diagnosis was exclusionary, or if it was a preliminary diagnosis, among others. |
Short | Condition Status |
Control | 0..1 |
Type | code |
Primitive Value | This primitive element may be present, or absent, or replaced by an extension |
20. ConditionOccurrence.stop-reason | |
Definition | The Stop Reason indicates why a Condition is no longer valid with respect to the purpose within the source data. Note that a Stop Reason does not necessarily imply that the condition is no longer occurring. |
Short | Stop Reason |
Control | 0..1 |
Type | string |
Primitive Value | This primitive element may be present, or absent, or replaced by an extension |
22. ConditionOccurrence.provider-id | |
Definition | The provider associated with condition record, e.g. the provider who made the diagnosis or the provider who recorded the symptom. |
Short | Provider |
Control | 0..1 |
Type | Reference(Provider OMOP Table) |
24. ConditionOccurrence.visit-occurrence-id | |
Definition | The visit during which the condition occurred. |
Short | Visit Occurrence |
Control | 0..1 |
Type | Reference(Visit Occurrence OMOP Table) |
26. ConditionOccurrence.visit-detail-id | |
Definition | The VISIT_DETAIL record during which the condition occurred. For example, if the person was in the ICU at the time of the diagnosis the VISIT_OCCURRENCE record would reflect the overall hospital stay and the VISIT_DETAIL record would reflect the ICU stay during the hospital visit. |
Short | Visit Detail |
Control | 0..1 |
Type | Reference(Visit Detail OMOP Table) |
28. ConditionOccurrence.condition-source-value | |
Definition | This field houses the verbatim value from the source data representing the condition that occurred. For example, this could be an ICD10 or Read code. |
Short | Condition Source Value |
Control | 0..1 |
Type | string |
Primitive Value | This primitive element may be present, or absent, or replaced by an extension |
30. ConditionOccurrence.condition-source-concept-id | |
Definition | This is the concept representing the condition source value and may not necessarily be standard. This field is discouraged from use in analysis because it is not required to contain Standard Concepts that are used across the OHDSI community, and should only be used when Standard Concepts do not adequately represent the source detail for the Condition necessary for a given analytic use case. Consider using CONDITION_CONCEPT_ID instead to enable standardized analytics that can be consistent across the network. |
Short | Condition Source Concept |
Control | 0..1 |
Type | code |
Primitive Value | This primitive element may be present, or absent, or replaced by an extension |
32. ConditionOccurrence.condition-status-source-value | |
Definition | This field houses the verbatim value from the source data representing the condition status. |
Short | Condition Status Source Value |
Control | 0..1 |
Type | string |
Primitive Value | This primitive element may be present, or absent, or replaced by an extension |
Guidance on how to interpret the contents of this table can be found here
0. ConditionOccurrence | |
Definition | This table contains records of Events of a Person suggesting the presence of a disease or medical condition stated as a diagnosis, a sign, or a symptom, which is either observed by a Provider or reported by the patient. |
Short | Condition Occurrence OMOP Table |
Control | 0..* |
Is Modifier | false |
Logical Model | Instances of this logical model are not marked to be the target of a Reference |
2. ConditionOccurrence.condition-occurrence-id | |
Definition | The unique key given to a condition record for a person. Refer to the ETL for how duplicate conditions during the same visit were handled. |
Short | Condition Occurence Identifier |
Control | 1..1 |
Type | integer |
Primitive Value | This primitive element may be present, or absent, or replaced by an extension |
4. ConditionOccurrence.person-id | |
Definition | The PERSON_ID of the PERSON for whom the condition is recorded. |
Short | Person |
Control | 1..1 |
Type | Reference(Person OMOP Table) |
6. ConditionOccurrence.condition-concept-id | |
Definition | The CONDITION_CONCEPT_ID field is recommended for primary use in analyses, and must be used for network studies. This is the standard concept mapped from the source value which represents a condition |
Short | Condition |
Control | 1..1 |
Type | code |
Primitive Value | This primitive element may be present, or absent, or replaced by an extension |
8. ConditionOccurrence.condition-start-date | |
Definition | Use this date to determine the start date of the condition |
Short | Condition Start Date |
Control | 1..1 |
Type | date |
Primitive Value | This primitive element may be present, or absent, or replaced by an extension |
10. ConditionOccurrence.condition-start-datetime | |
Definition | Condition Start Datetime |
Short | Condition Start Datetime |
Control | 0..1 |
Type | dateTime |
Primitive Value | This primitive element may be present, or absent, or replaced by an extension |
12. ConditionOccurrence.condition-end-date | |
Definition | Use this date to determine the end date of the condition |
Short | Condition End Date |
Control | 0..1 |
Type | date |
Primitive Value | This primitive element may be present, or absent, or replaced by an extension |
14. ConditionOccurrence.condition-end-datetime | |
Definition | Condition End Datetime |
Short | Condition End Datetime |
Control | 0..1 |
Type | dateTime |
Primitive Value | This primitive element may be present, or absent, or replaced by an extension |
16. ConditionOccurrence.condition-type-concept-id | |
Definition | This field can be used to determine the provenance of the Condition record, as in whether the condition was from an EHR system, insurance claim, registry, or other sources. |
Short | Condition Type |
Control | 1..1 |
Type | code |
Primitive Value | This primitive element may be present, or absent, or replaced by an extension |
18. ConditionOccurrence.condition-status-concept-id | |
Definition | This concept represents the point during the visit the diagnosis was given (admitting diagnosis, final diagnosis), whether the diagnosis was determined due to laboratory findings, if the diagnosis was exclusionary, or if it was a preliminary diagnosis, among others. |
Short | Condition Status |
Control | 0..1 |
Type | code |
Primitive Value | This primitive element may be present, or absent, or replaced by an extension |
20. ConditionOccurrence.stop-reason | |
Definition | The Stop Reason indicates why a Condition is no longer valid with respect to the purpose within the source data. Note that a Stop Reason does not necessarily imply that the condition is no longer occurring. |
Short | Stop Reason |
Control | 0..1 |
Type | string |
Primitive Value | This primitive element may be present, or absent, or replaced by an extension |
22. ConditionOccurrence.provider-id | |
Definition | The provider associated with condition record, e.g. the provider who made the diagnosis or the provider who recorded the symptom. |
Short | Provider |
Control | 0..1 |
Type | Reference(Provider OMOP Table) |
24. ConditionOccurrence.visit-occurrence-id | |
Definition | The visit during which the condition occurred. |
Short | Visit Occurrence |
Control | 0..1 |
Type | Reference(Visit Occurrence OMOP Table) |
26. ConditionOccurrence.visit-detail-id | |
Definition | The VISIT_DETAIL record during which the condition occurred. For example, if the person was in the ICU at the time of the diagnosis the VISIT_OCCURRENCE record would reflect the overall hospital stay and the VISIT_DETAIL record would reflect the ICU stay during the hospital visit. |
Short | Visit Detail |
Control | 0..1 |
Type | Reference(Visit Detail OMOP Table) |
28. ConditionOccurrence.condition-source-value | |
Definition | This field houses the verbatim value from the source data representing the condition that occurred. For example, this could be an ICD10 or Read code. |
Short | Condition Source Value |
Control | 0..1 |
Type | string |
Primitive Value | This primitive element may be present, or absent, or replaced by an extension |
30. ConditionOccurrence.condition-source-concept-id | |
Definition | This is the concept representing the condition source value and may not necessarily be standard. This field is discouraged from use in analysis because it is not required to contain Standard Concepts that are used across the OHDSI community, and should only be used when Standard Concepts do not adequately represent the source detail for the Condition necessary for a given analytic use case. Consider using CONDITION_CONCEPT_ID instead to enable standardized analytics that can be consistent across the network. |
Short | Condition Source Concept |
Control | 0..1 |
Type | code |
Primitive Value | This primitive element may be present, or absent, or replaced by an extension |
32. ConditionOccurrence.condition-status-source-value | |
Definition | This field houses the verbatim value from the source data representing the condition status. |
Short | Condition Status Source Value |
Control | 0..1 |
Type | string |
Primitive Value | This primitive element may be present, or absent, or replaced by an extension |