minimal Common Oncology Data Elements (mCODE) Implementation Guide, published by HL7 International / Clinical Interoperability Council. This guide is not an authorized publication; it is the continuous build for version 4.0.0-ballot built by the FHIR (HL7® FHIR® Standard) CI Build. This version is based on the current content of https://github.com/HL7/fhir-mCODE-ig/ and changes regularly. See the Directory of published versions
Generated Narrative: Observation genomic-variant-jenny-m
status: Final
category: Laboratory
code: Genetic variant assessment
subject: Jenny M Female, DoB: 1965-01-01 ( Medical Record Number: MRN1234 (use: usual, ))
effective: 2018-03-15
performer: Practitioner Owen Oncologist
value: Present
method: Sequencing
component
code: Gene studied [ID]
value: PALB2
component
code: Discrete genetic variant
value: NM_024675.3(PALB2):c.3549C>A (p.Tyr1183Ter)
component
code: Genomic DNA change (gHGVS)
value: NC_000016.10:g.23603471G>T
component
code: Genomic source class [Type]
value: Somatic