@prefix fhir: . @prefix owl: . @prefix rdfs: . @prefix xsd: . # - resource ------------------------------------------------------------------- a fhir:StructureMap ; fhir:nodeRole fhir:treeRoot ; fhir:id [ fhir:v "MolecularSequence4to5"] ; # fhir:text [ fhir:status [ fhir:v "generated" ] ; fhir:div "
\r\n/// url = 'http://hl7.org/fhir/StructureMap/MolecularSequence4to5'\r\n/// name = 'MolecularSequence4to5'\r\n/// title = 'MolecularSequence Transforms: R4 to R5'\r\n/// status = 'active'\r\n\r\nuses "http://hl7.org/fhir/4.0/MolecularSequence" alias MolecularSequenceR4 as source\r\nuses "http://hl7.org/fhir/5.0/MolecularSequence" alias MolecularSequenceR5 as target\r\n\r\nimports "http://hl7.org/fhir/StructureMap/*4to5"\r\n\r\ngroup MolecularSequence(source src : MolecularSequenceR4, target tgt : MolecularSequenceR5) extends DomainResource <<type+>> {\r\n  src.identifier -> tgt.identifier;\r\n  src.type as v -> tgt.type = translate(v, 'http://hl7.org/fhir/ConceptMap/MolecularSequence.type-R4toR5', 'code');\r\n  src.patient -> tgt.subject;\r\n  src.specimen -> tgt.specimen;\r\n  src.device -> tgt.device;\r\n  src.performer -> tgt.performer;\r\n  src.referenceSeq as s -> tgt.relative as t then MolecularSequenceReferenceSeq(s, t);\r\n  src.variant as s -> tgt.relative as t then MolecularSequenceVariant(s, t);\r\n}\r\n\r\ngroup MolecularSequenceReferenceSeq(source src, target tgt) extends BackboneElement {\r\n  src.chromosome as s where code = '1' ->  tgt.startingSequence as t,  t.chromosome = create('CodeableConcept') as tc,  tc.coding = create('Coding') as tcc,  tcc.system = 'http://loinc.org',  tcc.code = 'LA21254-0',  tcc.display = 'Chromosome 1';\r\n  src.chromosome as s where code = '2' ->  tgt.startingSequence as t,  t.chromosome = create('CodeableConcept') as tc,  tc.coding = create('Coding') as tcc,  tcc.system = 'http://loinc.org',  tcc.code = 'LA21255-7',  tcc.display = 'Chromosome 2';\r\n  src.chromosome as s where code = '3' ->  tgt.startingSequence as t,  t.chromosome = create('CodeableConcept') as tc,  tc.coding = create('Coding') as tcc,  tcc.system = 'http://loinc.org',  tcc.code = 'LA21256-5',  tcc.display = 'Chromosome 3';\r\n  src.chromosome as s where code = '4' ->  tgt.startingSequence as t,  t.chromosome = create('CodeableConcept') as tc,  tc.coding = create('Coding') as tcc,  tcc.system = 'http://loinc.org',  tcc.code = 'LA21257-3',  tcc.display = 'Chromosome 4';\r\n  src.chromosome as s where code = '5' ->  tgt.startingSequence as t,  t.chromosome = create('CodeableConcept') as tc,  tc.coding = create('Coding') as tcc,  tcc.system = 'http://loinc.org',  tcc.code = 'LA21258-1',  tcc.display = 'Chromosome 5';\r\n  src.chromosome as s where code = '6' ->  tgt.startingSequence as t,  t.chromosome = create('CodeableConcept') as tc,  tc.coding = create('Coding') as tcc,  tcc.system = 'http://loinc.org',  tcc.code = 'LA21259-9',  tcc.display = 'Chromosome 6';\r\n  src.chromosome as s where code = '7' ->  tgt.startingSequence as t,  t.chromosome = create('CodeableConcept') as tc,  tc.coding = create('Coding') as tcc,  tcc.system = 'http://loinc.org',  tcc.code = 'LA21260-7',  tcc.display = 'Chromosome 7';\r\n  src.chromosome as s where code = '8' ->  tgt.startingSequence as t,  t.chromosome = create('CodeableConcept') as tc,  tc.coding = create('Coding') as tcc,  tcc.system = 'http://loinc.org',  tcc.code = 'LA21261-5',  tcc.display = 'Chromosome 8';\r\n  src.chromosome as s where code = '9' ->  tgt.startingSequence as t,  t.chromosome = create('CodeableConcept') as tc,  tc.coding = create('Coding') as tcc,  tcc.system = 'http://loinc.org',  tcc.code = 'LA21262-3',  tcc.display = 'Chromosome 9';\r\n  src.chromosome as s where code = '10' ->  tgt.startingSequence as t,  t.chromosome = create('CodeableConcept') as tc,  tc.coding = create('Coding') as tcc,  tcc.system = 'http://loinc.org',  tcc.code = 'LA21263-1',  tcc.display = 'Chromosome 10';\r\n  src.chromosome as s where code = '11' ->  tgt.startingSequence as t,  t.chromosome = create('CodeableConcept') as tc,  tc.coding = create('Coding') as tcc,  tcc.system = 'http://loinc.org',  tcc.code = 'LA21264-9',  tcc.display = 'Chromosome 11';\r\n  src.chromosome as s where code = '12' ->  tgt.startingSequence as t,  t.chromosome = create('CodeableConcept') as tc,  tc.coding = create('Coding') as tcc,  tcc.system = 'http://loinc.org',  tcc.code = 'LA21265-6',  tcc.display = 'Chromosome 12';\r\n  src.chromosome as s where code = '13' ->  tgt.startingSequence as t,  t.chromosome = create('CodeableConcept') as tc,  tc.coding = create('Coding') as tcc,  tcc.system = 'http://loinc.org',  tcc.code = 'LA21266-4',  tcc.display = 'Chromosome 13';\r\n  src.chromosome as s where code = '14' ->  tgt.startingSequence as t,  t.chromosome = create('CodeableConcept') as tc,  tc.coding = create('Coding') as tcc,  tcc.system = 'http://loinc.org',  tcc.code = 'LA21267-2',  tcc.display = 'Chromosome 14';\r\n  src.chromosome as s where code = '15' ->  tgt.startingSequence as t,  t.chromosome = create('CodeableConcept') as tc,  tc.coding = create('Coding') as tcc,  tcc.system = 'http://loinc.org',  tcc.code = 'LA21268-0',  tcc.display = 'Chromosome 15';\r\n  src.chromosome as s where code = '16' ->  tgt.startingSequence as t,  t.chromosome = create('CodeableConcept') as tc,  tc.coding = create('Coding') as tcc,  tcc.system = 'http://loinc.org',  tcc.code = 'LA21269-8',  tcc.display = 'Chromosome 16';\r\n  src.chromosome as s where code = '17' ->  tgt.startingSequence as t,  t.chromosome = create('CodeableConcept') as tc,  tc.coding = create('Coding') as tcc,  tcc.system = 'http://loinc.org',  tcc.code = 'LA21270-6',  tcc.display = 'Chromosome 17';\r\n  src.chromosome as s where code = '18' ->  tgt.startingSequence as t,  t.chromosome = create('CodeableConcept') as tc,  tc.coding = create('Coding') as tcc,  tcc.system = 'http://loinc.org',  tcc.code = 'LA21271-4',  tcc.display = 'Chromosome 18';\r\n  src.chromosome as s where code = '19' ->  tgt.startingSequence as t,  t.chromosome = create('CodeableConcept') as tc,  tc.coding = create('Coding') as tcc,  tcc.system = 'http://loinc.org',  tcc.code = 'LA21272-2',  tcc.display = 'Chromosome 19';\r\n  src.chromosome as s where code = '20' ->  tgt.startingSequence as t,  t.chromosome = create('CodeableConcept') as tc,  tc.coding = create('Coding') as tcc,  tcc.system = 'http://loinc.org',  tcc.code = 'LA21273-0',  tcc.display = 'Chromosome 20';\r\n  src.chromosome as s where code = '21' ->  tgt.startingSequence as t,  t.chromosome = create('CodeableConcept') as tc,  tc.coding = create('Coding') as tcc,  tcc.system = 'http://loinc.org',  tcc.code = 'LA21274-8',  tcc.display = 'Chromosome 21';\r\n  src.chromosome as s where code = '22' ->  tgt.startingSequence as t,  t.chromosome = create('CodeableConcept') as tc,  tc.coding = create('Coding') as tcc,  tcc.system = 'http://loinc.org',  tcc.code = 'LA21275-5',  tcc.display = 'Chromosome 22';\r\n  src.chromosome as s where code = 'X' ->  tgt.startingSequence as t,  t.chromosome = create('CodeableConcept') as tc,  tc.coding = create('Coding') as tcc,  tcc.system = 'http://loinc.org',  tcc.code = 'LA21276-3',  tcc.display = 'Chromosome X';\r\n  src.chromosome as s where code = 'Y' ->  tgt.startingSequence as t,  t.chromosome = create('CodeableConcept') as tc,  tc.coding = create('Coding') as tcc,  tcc.system = 'http://loinc.org',  tcc.code = 'LA21277-1',  tcc.display = 'Chromosome Y';\r\n  src.referenceSeqId : CodeableConcept as s ->  tgt.startingSequence as t,  t.sequence = s;\r\n  src.referenceSeqPointer : Reference as s ->  tgt.startingSequence as t,  t.sequence = s;\r\n  src.referenceSeqString : string as s ->  tgt.startingSequence as t,  t.sequence = s;\r\n  src.windowStart : integer as s ->  tgt.startingSequence as t,  t.windowStart = s;\r\n  src.windowEnd : integer as s ->  tgt.startingSequence as t,  t.windowEnd = s;\r\n  src.orientation as v ->  tgt.startingSequence as t,  t.orientation = translate(v, 'http://hl7.org/fhir/ConceptMap/MolecularSequence.referenceSeq.orientation-R4toR5', 'code');\r\n  src.strand as v ->  tgt.startingSequence as t,  t.strand = translate(v, 'http://hl7.org/fhir/ConceptMap/MolecularSequence.referenceSeq.strand-R4toR5', 'code');\r\n}\r\n\r\ngroup MolecularSequenceVariant(source src, target tgt) extends BackboneElement {\r\n  src.start : integer as s ->  tgt.edit as t,  t.start = s;\r\n  src.end : integer as s ->  tgt.edit as t,  t.end = s;\r\n  src.observedAllele as s ->  tgt.edit as t,  t.replacementSequence = s;\r\n  src.referenceAllele as s ->  tgt.edit as t,  t.replacedSequence = s;\r\n}\r\n\r\n
" ] ; # fhir:extension ( [ fhir:url [ fhir:v "http://hl7.org/fhir/StructureDefinition/structuredefinition-wg"^^xsd:anyURI ] ; fhir:value [ fhir:v "fhir" ] ] [ fhir:url [ fhir:v "http://hl7.org/fhir/StructureDefinition/structuredefinition-fmm"^^xsd:anyURI ] ; fhir:value [ fhir:v "1"^^xsd:integer ; fhir:extension ( [ fhir:url [ fhir:v "http://hl7.org/fhir/StructureDefinition/structuredefinition-conformance-derivedFrom"^^xsd:anyURI ] ; fhir:value [ fhir:v "http://hl7.org/fhir/extensions/ImplementationGuide/hl7.fhir.uv.xver"^^xsd:anyURI ; fhir:link ] ] ) ] ] [ fhir:url [ fhir:v "http://hl7.org/fhir/StructureDefinition/structuredefinition-standards-status"^^xsd:anyURI ] ; fhir:value [ fhir:v "draft" ; fhir:extension ( [ fhir:url [ fhir:v "http://hl7.org/fhir/StructureDefinition/structuredefinition-conformance-derivedFrom"^^xsd:anyURI ] ; fhir:value [ fhir:v "http://hl7.org/fhir/extensions/ImplementationGuide/hl7.fhir.uv.xver"^^xsd:anyURI ; fhir:link ] ] ) ] ] ) ; # fhir:url [ fhir:v "http://hl7.org/fhir/StructureMap/MolecularSequence4to5"^^xsd:anyURI] ; # fhir:version [ fhir:v "0.1.0"] ; # fhir:name [ fhir:v "MolecularSequence4to5"] ; # fhir:title [ fhir:v "MolecularSequence Transforms: R4 to R5"] ; # fhir:status [ fhir:v "active"] ; # fhir:date [ fhir:v "2024-02-22T03:16:50+00:00"^^xsd:dateTime] ; # fhir:publisher [ fhir:v "HL7 International / FHIR Infrastructure"] ; # fhir:contact ( [ fhir:telecom ( [ fhir:system [ fhir:v "url" ] ; fhir:value [ fhir:v "http://www.hl7.org/Special/committees/fiwg" ] ] ) ] ) ; # fhir:description [ fhir:v "MolecularSequenceTransformsR4toR5"] ; # fhir:jurisdiction ( [ fhir:coding ( [ fhir:system [ fhir:v "http://unstats.un.org/unsd/methods/m49/m49.htm"^^xsd:anyURI ] ; fhir:code [ fhir:v "001" ] ] ) ] ) ; # fhir:structure ( [ fhir:url [ fhir:v "http://hl7.org/fhir/4.0/MolecularSequence"^^xsd:anyURI ; fhir:link ] ; fhir:mode [ fhir:v "source" ] ; fhir:alias [ fhir:v "MolecularSequenceR4" ] ] [ fhir:url [ fhir:v "http://hl7.org/fhir/5.0/MolecularSequence"^^xsd:anyURI ; fhir:link ] ; fhir:mode [ fhir:v "target" ] ; fhir:alias [ fhir:v "MolecularSequenceR5" ] ] ) ; # fhir:import ( [ fhir:v "http://hl7.org/fhir/StructureMap/*4to5"^^xsd:anyURI ; fhir:link ] ) ; # fhir:group ( [ fhir:name [ fhir:v "MolecularSequence" ] ; fhir:extends [ fhir:v "DomainResource" ] ; fhir:typeMode [ fhir:v "type-and-types" ] ; fhir:input ( [ fhir:name [ fhir:v "src" ] ; fhir:type [ fhir:v "MolecularSequenceR4" ] ; fhir:mode [ fhir:v "source" ] ] [ fhir:name [ fhir:v "tgt" ] ; fhir:type [ fhir:v "MolecularSequenceR5" ] ; fhir:mode [ fhir:v "target" ] ] ) ; fhir:rule ( [ fhir:name [ fhir:v "identifier" ] ; fhir:source ( [ fhir:context [ fhir:v "src" ] ; fhir:element [ fhir:v "identifier" ] ; fhir:variable [ fhir:v "vvv" ] ] ) ; fhir:target ( [ fhir:context [ fhir:v "tgt" ] ; fhir:element [ fhir:v "identifier" ] ; fhir:variable [ fhir:v "vvv" ] ; fhir:transform [ fhir:v "create" ] ] ) ; fhir:dependent ( [ fhir:name [ fhir:v "DefaultMappingGroupAnonymousAlias" ] ; fhir:parameter ( [ fhir:value [ fhir:v "vvv" ] ] [ fhir:value [ fhir:v "vvv" ] ] ) ] ) ] [ fhir:name [ fhir:v "type" ] ; fhir:source ( [ fhir:context [ fhir:v "src" ] ; fhir:element [ fhir:v "type" ] ; fhir:variable [ fhir:v "v" ] ] ) ; fhir:target ( [ fhir:context [ fhir:v "tgt" ] ; fhir:element [ fhir:v "type" ] ; fhir:transform [ fhir:v "translate" ] ; fhir:parameter ( [ fhir:value [ fhir:v "v" ] ] [ fhir:value [ fhir:v "http://hl7.org/fhir/ConceptMap/MolecularSequence.type-R4toR5" ] ] [ fhir:value [ fhir:v "code" ] ] ) ] ) ] [ fhir:name [ fhir:v "patient" ] ; fhir:source ( [ fhir:context [ fhir:v "src" ] ; fhir:element [ fhir:v "patient" ] ; fhir:variable [ fhir:v "vvv" ] ] ) ; fhir:target ( [ fhir:context [ fhir:v "tgt" ] ; fhir:element [ fhir:v "subject" ] ; fhir:variable [ fhir:v "vvv" ] ; fhir:transform [ fhir:v "create" ] ] ) ; fhir:dependent ( [ fhir:name [ fhir:v "DefaultMappingGroupAnonymousAlias" ] ; fhir:parameter ( [ fhir:value [ fhir:v "vvv" ] ] [ fhir:value [ fhir:v "vvv" ] ] ) ] ) ] [ fhir:name [ fhir:v "specimen" ] ; fhir:source ( [ fhir:context [ fhir:v "src" ] ; fhir:element [ fhir:v "specimen" ] ; fhir:variable [ fhir:v "vvv" ] ] ) ; fhir:target ( [ fhir:context [ fhir:v "tgt" ] ; fhir:element [ fhir:v "specimen" ] ; fhir:variable [ fhir:v "vvv" ] ; fhir:transform [ fhir:v "create" ] ] ) ; fhir:dependent ( [ fhir:name [ fhir:v "DefaultMappingGroupAnonymousAlias" ] ; fhir:parameter ( [ fhir:value [ fhir:v "vvv" ] ] [ fhir:value [ fhir:v "vvv" ] ] ) ] ) ] [ fhir:name [ fhir:v "device" ] ; fhir:source ( [ fhir:context [ fhir:v "src" ] ; fhir:element [ fhir:v "device" ] ; fhir:variable [ fhir:v "vvv" ] ] ) ; fhir:target ( [ fhir:context [ fhir:v "tgt" ] ; fhir:element [ fhir:v "device" ] ; fhir:variable [ fhir:v "vvv" ] ; fhir:transform [ fhir:v "create" ] ] ) ; fhir:dependent ( [ fhir:name [ fhir:v "DefaultMappingGroupAnonymousAlias" ] ; fhir:parameter ( [ fhir:value [ fhir:v "vvv" ] ] [ fhir:value [ fhir:v "vvv" ] ] ) ] ) ] [ fhir:name [ fhir:v "performer" ] ; fhir:source ( [ fhir:context [ fhir:v "src" ] ; fhir:element [ fhir:v "performer" ] ; fhir:variable [ fhir:v "vvv" ] ] ) ; fhir:target ( [ fhir:context [ fhir:v "tgt" ] ; fhir:element [ fhir:v "performer" ] ; fhir:variable [ fhir:v "vvv" ] ; fhir:transform [ fhir:v "create" ] ] ) ; fhir:dependent ( [ fhir:name [ fhir:v "DefaultMappingGroupAnonymousAlias" ] ; fhir:parameter ( [ fhir:value [ fhir:v "vvv" ] ] [ fhir:value [ fhir:v "vvv" ] ] ) ] ) ] [ fhir:name [ fhir:v "referenceSeq" ] ; fhir:source ( [ fhir:context [ fhir:v "src" ] ; fhir:element [ fhir:v "referenceSeq" ] ; fhir:variable [ fhir:v "s" ] ] ) ; fhir:target ( [ fhir:context [ fhir:v "tgt" ] ; fhir:element [ fhir:v "relative" ] ; fhir:variable [ fhir:v "t" ] ] ) ; fhir:dependent ( [ fhir:name [ fhir:v "MolecularSequenceReferenceSeq" ] ; fhir:parameter ( [ fhir:value [ fhir:v "s" ] ] [ fhir:value [ fhir:v "t" ] ] ) ] ) ] [ fhir:name [ fhir:v "variant" ] ; fhir:source ( [ fhir:context [ fhir:v "src" ] ; fhir:element [ fhir:v "variant" ] ; fhir:variable [ fhir:v "s" ] ] ) ; fhir:target ( [ fhir:context [ fhir:v "tgt" ] ; fhir:element [ fhir:v "relative" ] ; fhir:variable [ fhir:v "t" ] ] ) ; fhir:dependent ( [ fhir:name [ fhir:v "MolecularSequenceVariant" ] ; fhir:parameter ( [ fhir:value [ fhir:v "s" ] ] [ fhir:value [ fhir:v "t" ] ] ) ] ) ] ) ] [ fhir:name [ fhir:v "MolecularSequenceReferenceSeq" ] ; fhir:extends [ fhir:v "BackboneElement" ] ; fhir:input ( [ fhir:name [ fhir:v "src" ] ; fhir:mode [ fhir:v "source" ] ] [ fhir:name [ fhir:v "tgt" ] ; fhir:mode [ fhir:v "target" ] ] ) ; fhir:rule ( [ fhir:name [ fhir:v "chromosome" ] ; fhir:source ( [ fhir:context [ fhir:v "src" ] ; fhir:element [ fhir:v "chromosome" ] ; fhir:variable [ fhir:v "s" ] ; fhir:condition [ fhir:v "code = '1'" ] ] ) ; fhir:target ( [ fhir:context [ fhir:v "tgt" ] ; fhir:element [ fhir:v "startingSequence" ] ; fhir:variable [ fhir:v "t" ] ] [ fhir:context [ fhir:v "t" ] ; fhir:element [ fhir:v "chromosome" ] ; fhir:variable [ fhir:v "tc" ] ; fhir:transform [ fhir:v "create" ] ; fhir:parameter ( [ fhir:value [ fhir:v "CodeableConcept" ] ] ) ] [ fhir:context [ fhir:v "tc" ] ; fhir:element [ fhir:v "coding" ] ; fhir:variable [ fhir:v "tcc" ] ; fhir:transform [ fhir:v "create" ] ; fhir:parameter ( [ fhir:value [ fhir:v "Coding" ] ] ) ] [ fhir:context [ fhir:v "tcc" ] ; fhir:element [ fhir:v "system" ] ; fhir:transform [ fhir:v "copy" ] ; fhir:parameter ( [ fhir:value [ fhir:v "http://loinc.org" ] ] ) ] [ fhir:context [ fhir:v "tcc" ] ; fhir:element [ fhir:v "code" ] ; fhir:transform [ fhir:v "copy" ] ; fhir:parameter ( [ fhir:value [ fhir:v "LA21254-0" ] ] ) ] [ fhir:context [ fhir:v "tcc" ] ; fhir:element [ fhir:v "display" ] ; fhir:transform [ fhir:v "copy" ] ; fhir:parameter ( [ fhir:value [ fhir:v "Chromosome 1" ] ] ) ] ) ] [ fhir:name [ fhir:v "chromosome" ] ; fhir:source ( [ fhir:context [ fhir:v "src" ] ; fhir:element [ fhir:v "chromosome" ] ; fhir:variable [ fhir:v "s" ] ; fhir:condition [ fhir:v "code = '2'" ] ] ) ; fhir:target ( [ fhir:context [ fhir:v "tgt" ] ; fhir:element [ fhir:v "startingSequence" ] ; fhir:variable [ fhir:v "t" ] ] [ fhir:context [ fhir:v "t" ] ; fhir:element [ fhir:v "chromosome" ] ; fhir:variable [ fhir:v "tc" ] ; fhir:transform [ fhir:v "create" ] ; fhir:parameter ( [ fhir:value [ fhir:v "CodeableConcept" ] ] ) ] [ fhir:context [ fhir:v "tc" ] ; fhir:element [ fhir:v "coding" ] ; fhir:variable [ fhir:v "tcc" ] ; fhir:transform [ fhir:v "create" ] ; fhir:parameter ( [ fhir:value [ fhir:v "Coding" ] ] ) ] [ fhir:context [ fhir:v "tcc" ] ; fhir:element [ fhir:v "system" ] ; fhir:transform [ fhir:v "copy" ] ; fhir:parameter ( [ fhir:value [ fhir:v "http://loinc.org" ] ] ) ] [ fhir:context [ fhir:v "tcc" ] ; fhir:element [ fhir:v "code" ] ; fhir:transform [ fhir:v "copy" ] ; fhir:parameter ( [ fhir:value [ fhir:v "LA21255-7" ] ] ) ] [ fhir:context [ fhir:v "tcc" ] ; fhir:element [ fhir:v "display" ] ; fhir:transform [ fhir:v "copy" ] ; fhir:parameter ( [ fhir:value [ fhir:v "Chromosome 2" ] ] ) ] ) ] [ fhir:name [ fhir:v "chromosome" ] ; fhir:source ( [ fhir:context [ fhir:v "src" ] ; fhir:element [ fhir:v "chromosome" ] ; fhir:variable [ fhir:v "s" ] ; fhir:condition [ fhir:v "code = '3'" ] ] ) ; fhir:target ( [ fhir:context [ fhir:v "tgt" ] ; fhir:element [ fhir:v "startingSequence" ] ; fhir:variable [ fhir:v "t" ] ] [ fhir:context [ fhir:v "t" ] ; fhir:element [ fhir:v "chromosome" ] ; fhir:variable [ fhir:v "tc" ] ; fhir:transform [ fhir:v "create" ] ; fhir:parameter ( [ fhir:value [ fhir:v "CodeableConcept" ] ] ) ] [ fhir:context [ fhir:v "tc" ] ; fhir:element [ fhir:v "coding" ] ; fhir:variable [ fhir:v "tcc" ] ; fhir:transform [ fhir:v "create" ] ; fhir:parameter ( [ fhir:value [ fhir:v "Coding" ] ] ) ] [ fhir:context [ fhir:v "tcc" ] ; fhir:element [ fhir:v "system" ] ; fhir:transform [ fhir:v "copy" ] ; fhir:parameter ( [ fhir:value [ fhir:v "http://loinc.org" ] ] ) ] [ fhir:context [ fhir:v "tcc" ] ; fhir:element [ fhir:v "code" ] ; fhir:transform [ fhir:v "copy" ] ; fhir:parameter ( [ fhir:value [ fhir:v "LA21256-5" ] ] ) ] [ fhir:context [ fhir:v "tcc" ] ; fhir:element [ fhir:v "display" ] ; fhir:transform [ fhir:v "copy" ] ; fhir:parameter ( [ fhir:value [ fhir:v "Chromosome 3" ] ] ) ] ) ] [ fhir:name [ fhir:v "chromosome" ] ; fhir:source ( [ fhir:context [ fhir:v "src" ] ; fhir:element [ fhir:v "chromosome" ] ; fhir:variable [ fhir:v "s" ] ; fhir:condition [ fhir:v "code = '4'" ] ] ) ; fhir:target ( [ fhir:context [ fhir:v "tgt" ] ; fhir:element [ fhir:v "startingSequence" ] ; fhir:variable [ fhir:v "t" ] ] [ fhir:context [ fhir:v "t" ] ; fhir:element [ fhir:v "chromosome" ] ; fhir:variable [ fhir:v "tc" ] ; fhir:transform [ fhir:v "create" ] ; fhir:parameter ( [ fhir:value [ fhir:v "CodeableConcept" ] ] ) ] [ fhir:context [ fhir:v "tc" ] ; fhir:element [ fhir:v "coding" ] ; fhir:variable [ fhir:v "tcc" ] ; fhir:transform [ fhir:v "create" ] ; fhir:parameter ( [ fhir:value [ fhir:v "Coding" ] ] ) ] [ fhir:context [ fhir:v "tcc" ] ; fhir:element [ fhir:v "system" ] ; fhir:transform [ fhir:v "copy" ] ; fhir:parameter ( [ fhir:value [ fhir:v "http://loinc.org" ] ] ) ] [ fhir:context [ fhir:v "tcc" ] ; fhir:element [ fhir:v "code" ] ; fhir:transform [ fhir:v "copy" ] ; fhir:parameter ( [ fhir:value [ fhir:v "LA21257-3" ] ] ) ] [ fhir:context [ fhir:v "tcc" ] ; fhir:element [ fhir:v "display" ] ; fhir:transform [ fhir:v "copy" ] ; fhir:parameter ( [ fhir:value [ fhir:v "Chromosome 4" ] ] ) ] ) ] [ fhir:name [ fhir:v "chromosome" ] ; fhir:source ( [ fhir:context [ fhir:v "src" ] ; fhir:element [ fhir:v "chromosome" ] ; fhir:variable [ fhir:v "s" ] ; fhir:condition [ fhir:v "code = '5'" ] ] ) ; fhir:target ( [ fhir:context [ fhir:v "tgt" ] ; fhir:element [ fhir:v "startingSequence" ] ; fhir:variable [ fhir:v "t" ] ] [ fhir:context [ fhir:v "t" ] ; fhir:element [ fhir:v "chromosome" ] ; fhir:variable [ fhir:v "tc" ] ; fhir:transform [ fhir:v "create" ] ; fhir:parameter ( [ fhir:value [ fhir:v "CodeableConcept" ] ] ) ] [ fhir:context [ fhir:v "tc" ] ; fhir:element [ fhir:v "coding" ] ; fhir:variable [ fhir:v "tcc" ] ; fhir:transform [ fhir:v "create" ] ; fhir:parameter ( [ fhir:value [ fhir:v "Coding" ] ] ) ] [ fhir:context [ fhir:v "tcc" ] ; fhir:element [ fhir:v "system" ] ; fhir:transform [ fhir:v "copy" ] ; fhir:parameter ( [ fhir:value [ fhir:v "http://loinc.org" ] ] ) ] [ fhir:context [ fhir:v "tcc" ] ; fhir:element [ fhir:v "code" ] ; fhir:transform [ fhir:v "copy" ] ; fhir:parameter ( [ fhir:value [ fhir:v "LA21258-1" ] ] ) ] [ fhir:context [ fhir:v "tcc" ] ; fhir:element [ fhir:v "display" ] ; fhir:transform [ fhir:v "copy" ] ; fhir:parameter ( [ fhir:value [ fhir:v "Chromosome 5" ] ] ) ] ) ] [ fhir:name [ fhir:v "chromosome" ] ; fhir:source ( [ fhir:context [ fhir:v "src" ] ; fhir:element [ fhir:v "chromosome" ] ; fhir:variable [ fhir:v "s" ] ; fhir:condition [ fhir:v "code = '6'" ] ] ) ; fhir:target ( [ fhir:context [ fhir:v "tgt" ] ; fhir:element [ fhir:v "startingSequence" ] ; fhir:variable [ fhir:v "t" ] ] [ fhir:context [ fhir:v "t" ] ; fhir:element [ fhir:v "chromosome" ] ; fhir:variable [ fhir:v "tc" ] ; fhir:transform [ fhir:v "create" ] ; fhir:parameter ( [ fhir:value [ fhir:v "CodeableConcept" ] ] ) ] [ fhir:context [ fhir:v "tc" ] ; fhir:element [ fhir:v "coding" ] ; fhir:variable [ fhir:v "tcc" ] ; fhir:transform [ fhir:v "create" ] ; fhir:parameter ( [ fhir:value [ fhir:v "Coding" ] ] ) ] [ fhir:context [ fhir:v "tcc" ] ; fhir:element [ fhir:v "system" ] ; fhir:transform [ fhir:v "copy" ] ; fhir:parameter ( [ fhir:value [ fhir:v "http://loinc.org" ] ] ) ] [ fhir:context [ fhir:v "tcc" ] ; fhir:element [ fhir:v "code" ] ; fhir:transform [ fhir:v "copy" ] ; fhir:parameter ( [ fhir:value [ fhir:v "LA21259-9" ] ] ) ] [ fhir:context [ fhir:v "tcc" ] ; fhir:element [ fhir:v "display" ] ; fhir:transform [ fhir:v "copy" ] ; fhir:parameter ( [ fhir:value [ fhir:v "Chromosome 6" ] ] ) ] ) ] [ fhir:name [ fhir:v "chromosome" ] ; fhir:source ( [ fhir:context [ fhir:v "src" ] ; fhir:element [ fhir:v "chromosome" ] ; fhir:variable [ fhir:v "s" ] ; fhir:condition [ fhir:v "code = '7'" ] ] ) ; fhir:target ( [ fhir:context [ fhir:v "tgt" ] ; fhir:element [ fhir:v "startingSequence" ] ; fhir:variable [ fhir:v "t" ] ] [ fhir:context [ fhir:v "t" ] ; fhir:element [ fhir:v "chromosome" ] ; fhir:variable [ fhir:v "tc" ] ; fhir:transform [ fhir:v "create" ] ; fhir:parameter ( [ fhir:value [ fhir:v "CodeableConcept" ] ] ) ] [ fhir:context [ fhir:v "tc" ] ; fhir:element [ fhir:v "coding" ] ; fhir:variable [ fhir:v "tcc" ] ; fhir:transform [ fhir:v "create" ] ; fhir:parameter ( [ fhir:value [ fhir:v "Coding" ] ] ) ] [ fhir:context [ fhir:v "tcc" ] ; fhir:element [ fhir:v "system" ] ; fhir:transform [ fhir:v "copy" ] ; fhir:parameter ( [ fhir:value [ fhir:v "http://loinc.org" ] ] ) ] [ fhir:context [ fhir:v "tcc" ] ; fhir:element [ fhir:v "code" ] ; fhir:transform [ fhir:v "copy" ] ; fhir:parameter ( [ fhir:value [ fhir:v "LA21260-7" ] ] ) ] [ fhir:context [ fhir:v "tcc" ] ; fhir:element [ fhir:v "display" ] ; fhir:transform [ fhir:v "copy" ] ; fhir:parameter ( [ fhir:value [ fhir:v "Chromosome 7" ] ] ) ] ) ] [ fhir:name [ fhir:v "chromosome" ] ; fhir:source ( [ fhir:context [ fhir:v "src" ] ; fhir:element [ fhir:v "chromosome" ] ; fhir:variable [ fhir:v "s" ] ; fhir:condition [ fhir:v "code = '8'" ] ] ) ; fhir:target ( [ fhir:context [ fhir:v "tgt" ] ; fhir:element [ fhir:v "startingSequence" ] ; fhir:variable [ fhir:v "t" ] ] [ fhir:context [ fhir:v "t" ] ; fhir:element [ fhir:v "chromosome" ] ; fhir:variable [ fhir:v "tc" ] ; fhir:transform [ fhir:v "create" ] ; fhir:parameter ( [ fhir:value [ fhir:v "CodeableConcept" ] ] ) ] [ fhir:context [ fhir:v "tc" ] ; fhir:element [ fhir:v "coding" ] ; fhir:variable [ fhir:v "tcc" ] ; fhir:transform [ fhir:v "create" ] ; fhir:parameter ( [ fhir:value [ fhir:v "Coding" ] ] ) ] [ fhir:context [ fhir:v "tcc" ] ; fhir:element [ fhir:v "system" ] ; fhir:transform [ fhir:v "copy" ] ; fhir:parameter ( [ fhir:value [ fhir:v "http://loinc.org" ] ] ) ] [ fhir:context [ fhir:v "tcc" ] ; fhir:element [ fhir:v "code" ] ; fhir:transform [ fhir:v "copy" ] ; fhir:parameter ( [ fhir:value [ fhir:v "LA21261-5" ] ] ) ] [ fhir:context [ fhir:v "tcc" ] ; fhir:element [ fhir:v "display" ] ; fhir:transform [ fhir:v "copy" ] ; fhir:parameter ( [ fhir:value [ fhir:v "Chromosome 8" ] ] ) ] ) ] [ fhir:name [ fhir:v "chromosome" ] ; fhir:source ( [ fhir:context [ fhir:v "src" ] ; fhir:element [ fhir:v "chromosome" ] ; fhir:variable [ fhir:v "s" ] ; fhir:condition [ fhir:v "code = '9'" ] ] ) ; fhir:target ( [ fhir:context [ fhir:v "tgt" ] ; fhir:element [ fhir:v "startingSequence" ] ; fhir:variable [ fhir:v "t" ] ] [ fhir:context [ fhir:v "t" ] ; fhir:element [ fhir:v "chromosome" ] ; fhir:variable [ fhir:v "tc" ] ; fhir:transform [ fhir:v "create" ] ; fhir:parameter ( [ fhir:value [ fhir:v "CodeableConcept" ] ] ) ] [ fhir:context [ fhir:v "tc" ] ; fhir:element [ fhir:v "coding" ] ; fhir:variable [ fhir:v "tcc" ] ; fhir:transform [ fhir:v "create" ] ; fhir:parameter ( [ fhir:value [ fhir:v "Coding" ] ] ) ] [ fhir:context [ fhir:v "tcc" ] ; fhir:element [ fhir:v "system" ] ; fhir:transform [ fhir:v "copy" ] ; fhir:parameter ( [ fhir:value [ fhir:v "http://loinc.org" ] ] ) ] [ fhir:context [ fhir:v "tcc" ] ; fhir:element [ fhir:v "code" ] ; fhir:transform [ fhir:v "copy" ] ; fhir:parameter ( [ fhir:value [ fhir:v "LA21262-3" ] ] ) ] [ fhir:context [ fhir:v "tcc" ] ; fhir:element [ fhir:v "display" ] ; fhir:transform [ fhir:v "copy" ] ; fhir:parameter ( [ fhir:value [ fhir:v "Chromosome 9" ] ] ) ] ) ] [ fhir:name [ fhir:v "chromosome" ] ; fhir:source ( [ fhir:context [ fhir:v "src" ] ; fhir:element [ fhir:v "chromosome" ] ; fhir:variable [ fhir:v "s" ] ; fhir:condition [ fhir:v "code = '10'" ] ] ) ; fhir:target ( [ fhir:context [ fhir:v "tgt" ] ; fhir:element [ fhir:v "startingSequence" ] ; fhir:variable [ fhir:v "t" ] ] [ fhir:context [ fhir:v "t" ] ; fhir:element [ fhir:v "chromosome" ] ; fhir:variable [ fhir:v "tc" ] ; fhir:transform [ fhir:v "create" ] ; fhir:parameter ( [ fhir:value [ fhir:v "CodeableConcept" ] ] ) ] [ fhir:context [ fhir:v "tc" ] ; fhir:element [ fhir:v "coding" ] ; fhir:variable [ fhir:v "tcc" ] ; fhir:transform [ fhir:v "create" ] ; fhir:parameter ( [ fhir:value [ fhir:v "Coding" ] ] ) ] [ fhir:context [ fhir:v "tcc" ] ; fhir:element [ fhir:v "system" ] ; fhir:transform [ fhir:v "copy" ] ; fhir:parameter ( [ fhir:value [ fhir:v "http://loinc.org" ] ] ) ] [ fhir:context [ fhir:v "tcc" ] ; fhir:element [ fhir:v "code" ] ; fhir:transform [ fhir:v "copy" ] ; fhir:parameter ( [ fhir:value [ fhir:v "LA21263-1" ] ] ) ] [ fhir:context [ fhir:v "tcc" ] ; fhir:element [ fhir:v "display" ] ; fhir:transform [ fhir:v "copy" ] ; fhir:parameter ( [ fhir:value [ fhir:v "Chromosome 10" ] ] ) ] ) ] [ fhir:name [ fhir:v "chromosome" ] ; fhir:source ( [ fhir:context [ fhir:v "src" ] ; fhir:element [ fhir:v "chromosome" ] ; fhir:variable [ fhir:v "s" ] ; fhir:condition [ fhir:v "code = '11'" ] ] ) ; fhir:target ( [ fhir:context [ fhir:v "tgt" ] ; fhir:element [ fhir:v "startingSequence" ] ; fhir:variable [ fhir:v "t" ] ] [ fhir:context [ fhir:v "t" ] ; fhir:element [ fhir:v "chromosome" ] ; fhir:variable [ fhir:v "tc" ] ; fhir:transform [ fhir:v "create" ] ; fhir:parameter ( [ fhir:value [ fhir:v "CodeableConcept" ] ] ) ] [ fhir:context [ fhir:v "tc" ] ; fhir:element [ fhir:v "coding" ] ; fhir:variable [ fhir:v "tcc" ] ; fhir:transform [ fhir:v "create" ] ; fhir:parameter ( [ fhir:value [ fhir:v "Coding" ] ] ) ] [ fhir:context [ fhir:v "tcc" ] ; fhir:element [ fhir:v "system" ] ; fhir:transform [ fhir:v "copy" ] ; fhir:parameter ( [ fhir:value [ fhir:v "http://loinc.org" ] ] ) ] [ fhir:context [ fhir:v "tcc" ] ; fhir:element [ fhir:v "code" ] ; fhir:transform [ fhir:v "copy" ] ; fhir:parameter ( [ fhir:value [ fhir:v "LA21264-9" ] ] ) ] [ fhir:context [ fhir:v "tcc" ] ; fhir:element [ fhir:v "display" ] ; fhir:transform [ fhir:v "copy" ] ; fhir:parameter ( [ fhir:value [ fhir:v "Chromosome 11" ] ] ) ] ) ] [ fhir:name [ fhir:v "chromosome" ] ; fhir:source ( [ fhir:context [ fhir:v "src" ] ; fhir:element [ fhir:v "chromosome" ] ; fhir:variable [ fhir:v "s" ] ; fhir:condition [ fhir:v "code = '12'" ] ] ) ; fhir:target ( [ fhir:context [ fhir:v "tgt" ] ; fhir:element [ fhir:v "startingSequence" ] ; fhir:variable [ fhir:v "t" ] ] [ fhir:context [ fhir:v "t" ] ; fhir:element [ fhir:v "chromosome" ] ; fhir:variable [ fhir:v "tc" ] ; fhir:transform [ fhir:v "create" ] ; fhir:parameter ( [ fhir:value [ fhir:v "CodeableConcept" ] ] ) ] [ fhir:context [ fhir:v "tc" ] ; fhir:element [ fhir:v "coding" ] ; fhir:variable [ fhir:v "tcc" ] ; fhir:transform [ fhir:v "create" ] ; fhir:parameter ( [ fhir:value [ fhir:v "Coding" ] ] ) ] [ fhir:context [ fhir:v "tcc" ] ; fhir:element [ fhir:v "system" ] ; fhir:transform [ fhir:v "copy" ] ; fhir:parameter ( [ fhir:value [ fhir:v "http://loinc.org" ] ] ) ] [ fhir:context [ fhir:v "tcc" ] ; fhir:element [ fhir:v "code" ] ; fhir:transform [ fhir:v "copy" ] ; fhir:parameter ( [ fhir:value [ fhir:v "LA21265-6" ] ] ) ] [ fhir:context [ fhir:v "tcc" ] ; fhir:element [ fhir:v "display" ] ; fhir:transform [ fhir:v "copy" ] ; fhir:parameter ( [ fhir:value [ fhir:v "Chromosome 12" ] ] ) ] ) ] [ fhir:name [ fhir:v "chromosome" ] ; fhir:source ( [ fhir:context [ fhir:v "src" ] ; fhir:element [ fhir:v "chromosome" ] ; fhir:variable [ fhir:v "s" ] ; fhir:condition [ fhir:v "code = '13'" ] ] ) ; fhir:target ( [ fhir:context [ fhir:v "tgt" ] ; fhir:element [ fhir:v "startingSequence" ] ; fhir:variable [ fhir:v "t" ] ] [ fhir:context [ fhir:v "t" ] ; fhir:element [ fhir:v "chromosome" ] ; fhir:variable [ fhir:v "tc" ] ; fhir:transform [ fhir:v "create" ] ; fhir:parameter ( [ fhir:value [ fhir:v "CodeableConcept" ] ] ) ] [ fhir:context [ fhir:v "tc" ] ; fhir:element [ fhir:v "coding" ] ; fhir:variable [ fhir:v "tcc" ] ; fhir:transform [ fhir:v "create" ] ; fhir:parameter ( [ fhir:value [ fhir:v "Coding" ] ] ) ] [ fhir:context [ fhir:v "tcc" ] ; fhir:element [ fhir:v "system" ] ; fhir:transform [ fhir:v "copy" ] ; fhir:parameter ( [ fhir:value [ fhir:v "http://loinc.org" ] ] ) ] [ fhir:context [ fhir:v "tcc" ] ; fhir:element [ fhir:v "code" ] ; fhir:transform [ fhir:v "copy" ] ; fhir:parameter ( [ fhir:value [ fhir:v "LA21266-4" ] ] ) ] [ fhir:context [ fhir:v "tcc" ] ; fhir:element [ fhir:v "display" ] ; fhir:transform [ fhir:v "copy" ] ; fhir:parameter ( [ fhir:value [ fhir:v "Chromosome 13" ] ] ) ] ) ] [ fhir:name [ fhir:v "chromosome" ] ; fhir:source ( [ fhir:context [ fhir:v "src" ] ; fhir:element [ fhir:v "chromosome" ] ; fhir:variable [ fhir:v "s" ] ; fhir:condition [ fhir:v "code = '14'" ] ] ) ; fhir:target ( [ fhir:context [ fhir:v "tgt" ] ; fhir:element [ fhir:v "startingSequence" ] ; fhir:variable [ fhir:v "t" ] ] [ fhir:context [ fhir:v "t" ] ; fhir:element [ fhir:v "chromosome" ] ; fhir:variable [ fhir:v "tc" ] ; fhir:transform [ fhir:v "create" ] ; fhir:parameter ( [ fhir:value [ fhir:v "CodeableConcept" ] ] ) ] [ fhir:context [ fhir:v "tc" ] ; fhir:element [ fhir:v "coding" ] ; fhir:variable [ fhir:v "tcc" ] ; fhir:transform [ fhir:v "create" ] ; fhir:parameter ( [ fhir:value [ fhir:v "Coding" ] ] ) ] [ fhir:context [ fhir:v "tcc" ] ; fhir:element [ fhir:v "system" ] ; fhir:transform [ fhir:v "copy" ] ; fhir:parameter ( [ fhir:value [ fhir:v "http://loinc.org" ] ] ) ] [ fhir:context [ fhir:v "tcc" ] ; fhir:element [ fhir:v "code" ] ; fhir:transform [ fhir:v "copy" ] ; fhir:parameter ( [ fhir:value [ fhir:v "LA21267-2" ] ] ) ] [ fhir:context [ fhir:v "tcc" ] ; fhir:element [ fhir:v "display" ] ; fhir:transform [ fhir:v "copy" ] ; fhir:parameter ( [ fhir:value [ fhir:v "Chromosome 14" ] ] ) ] ) ] [ fhir:name [ fhir:v "chromosome" ] ; fhir:source ( [ fhir:context [ fhir:v "src" ] ; fhir:element [ fhir:v "chromosome" ] ; fhir:variable [ fhir:v "s" ] ; fhir:condition [ fhir:v "code = '15'" ] ] ) ; fhir:target ( [ fhir:context [ fhir:v "tgt" ] ; fhir:element [ fhir:v "startingSequence" ] ; fhir:variable [ fhir:v "t" ] ] [ fhir:context [ fhir:v "t" ] ; fhir:element [ fhir:v "chromosome" ] ; fhir:variable [ fhir:v "tc" ] ; fhir:transform [ fhir:v "create" ] ; fhir:parameter ( [ fhir:value [ fhir:v "CodeableConcept" ] ] ) ] [ fhir:context [ fhir:v "tc" ] ; fhir:element [ fhir:v "coding" ] ; fhir:variable [ fhir:v "tcc" ] ; fhir:transform [ fhir:v "create" ] ; fhir:parameter ( [ fhir:value [ fhir:v "Coding" ] ] ) ] [ fhir:context [ fhir:v "tcc" ] ; fhir:element [ fhir:v "system" ] ; fhir:transform [ fhir:v "copy" ] ; fhir:parameter ( [ fhir:value [ fhir:v "http://loinc.org" ] ] ) ] [ fhir:context [ fhir:v "tcc" ] ; fhir:element [ fhir:v "code" ] ; fhir:transform [ fhir:v "copy" ] ; fhir:parameter ( [ fhir:value [ fhir:v "LA21268-0" ] ] ) ] [ fhir:context [ fhir:v "tcc" ] ; fhir:element [ fhir:v "display" ] ; fhir:transform [ fhir:v "copy" ] ; fhir:parameter ( [ fhir:value [ fhir:v "Chromosome 15" ] ] ) ] ) ] [ fhir:name [ fhir:v "chromosome" ] ; fhir:source ( [ fhir:context [ fhir:v "src" ] ; fhir:element [ fhir:v "chromosome" ] ; fhir:variable [ fhir:v "s" ] ; fhir:condition [ fhir:v "code = '16'" ] ] ) ; fhir:target ( [ fhir:context [ fhir:v "tgt" ] ; fhir:element [ fhir:v "startingSequence" ] ; fhir:variable [ fhir:v "t" ] ] [ fhir:context [ fhir:v "t" ] ; fhir:element [ fhir:v "chromosome" ] ; fhir:variable [ fhir:v "tc" ] ; fhir:transform [ fhir:v "create" ] ; fhir:parameter ( [ fhir:value [ fhir:v "CodeableConcept" ] ] ) ] [ fhir:context [ fhir:v "tc" ] ; fhir:element [ fhir:v "coding" ] ; fhir:variable [ fhir:v "tcc" ] ; fhir:transform [ fhir:v "create" ] ; fhir:parameter ( [ fhir:value [ fhir:v "Coding" ] ] ) ] [ fhir:context [ fhir:v "tcc" ] ; fhir:element [ fhir:v "system" ] ; fhir:transform [ fhir:v "copy" ] ; fhir:parameter ( [ fhir:value [ fhir:v "http://loinc.org" ] ] ) ] [ fhir:context [ fhir:v "tcc" ] ; fhir:element [ fhir:v "code" ] ; fhir:transform [ fhir:v "copy" ] ; fhir:parameter ( [ fhir:value [ fhir:v "LA21269-8" ] ] ) ] [ fhir:context [ fhir:v "tcc" ] ; fhir:element [ fhir:v "display" ] ; fhir:transform [ fhir:v "copy" ] ; fhir:parameter ( [ fhir:value [ fhir:v "Chromosome 16" ] ] ) ] ) ] [ fhir:name [ fhir:v "chromosome" ] ; fhir:source ( [ fhir:context [ fhir:v "src" ] ; fhir:element [ fhir:v "chromosome" ] ; fhir:variable [ fhir:v "s" ] ; fhir:condition [ fhir:v "code = '17'" ] ] ) ; fhir:target ( [ fhir:context [ fhir:v "tgt" ] ; fhir:element [ fhir:v "startingSequence" ] ; fhir:variable [ fhir:v "t" ] ] [ fhir:context [ fhir:v "t" ] ; fhir:element [ fhir:v "chromosome" ] ; fhir:variable [ fhir:v "tc" ] ; fhir:transform [ fhir:v "create" ] ; fhir:parameter ( [ fhir:value [ fhir:v "CodeableConcept" ] ] ) ] [ fhir:context [ fhir:v "tc" ] ; fhir:element [ fhir:v "coding" ] ; fhir:variable [ fhir:v "tcc" ] ; fhir:transform [ fhir:v "create" ] ; fhir:parameter ( [ fhir:value [ fhir:v "Coding" ] ] ) ] [ fhir:context [ fhir:v "tcc" ] ; fhir:element [ fhir:v "system" ] ; fhir:transform [ fhir:v "copy" ] ; fhir:parameter ( [ fhir:value [ fhir:v "http://loinc.org" ] ] ) ] [ fhir:context [ fhir:v "tcc" ] ; fhir:element [ fhir:v "code" ] ; fhir:transform [ fhir:v "copy" ] ; fhir:parameter ( [ fhir:value [ fhir:v "LA21270-6" ] ] ) ] [ fhir:context [ fhir:v "tcc" ] ; fhir:element [ fhir:v "display" ] ; fhir:transform [ fhir:v "copy" ] ; fhir:parameter ( [ fhir:value [ fhir:v "Chromosome 17" ] ] ) ] ) ] [ fhir:name [ fhir:v "chromosome" ] ; fhir:source ( [ fhir:context [ fhir:v "src" ] ; fhir:element [ fhir:v "chromosome" ] ; fhir:variable [ fhir:v "s" ] ; fhir:condition [ fhir:v "code = '18'" ] ] ) ; fhir:target ( [ fhir:context [ fhir:v "tgt" ] ; fhir:element [ fhir:v "startingSequence" ] ; fhir:variable [ fhir:v "t" ] ] [ fhir:context [ fhir:v "t" ] ; fhir:element [ fhir:v "chromosome" ] ; fhir:variable [ fhir:v "tc" ] ; fhir:transform [ fhir:v "create" ] ; fhir:parameter ( [ fhir:value [ fhir:v "CodeableConcept" ] ] ) ] [ fhir:context [ fhir:v "tc" ] ; fhir:element [ fhir:v "coding" ] ; fhir:variable [ fhir:v "tcc" ] ; fhir:transform [ fhir:v "create" ] ; fhir:parameter ( [ fhir:value [ fhir:v "Coding" ] ] ) ] [ fhir:context [ fhir:v "tcc" ] ; fhir:element [ fhir:v "system" ] ; fhir:transform [ fhir:v "copy" ] ; fhir:parameter ( [ fhir:value [ fhir:v "http://loinc.org" ] ] ) ] [ fhir:context [ fhir:v "tcc" ] ; fhir:element [ fhir:v "code" ] ; fhir:transform [ fhir:v "copy" ] ; fhir:parameter ( [ fhir:value [ fhir:v "LA21271-4" ] ] ) ] [ fhir:context [ fhir:v "tcc" ] ; fhir:element [ fhir:v "display" ] ; fhir:transform [ fhir:v "copy" ] ; fhir:parameter ( [ fhir:value [ fhir:v "Chromosome 18" ] ] ) ] ) ] [ fhir:name [ fhir:v "chromosome" ] ; fhir:source ( [ fhir:context [ fhir:v "src" ] ; fhir:element [ fhir:v "chromosome" ] ; fhir:variable [ fhir:v "s" ] ; fhir:condition [ fhir:v "code = '19'" ] ] ) ; fhir:target ( [ fhir:context [ fhir:v "tgt" ] ; fhir:element [ fhir:v "startingSequence" ] ; fhir:variable [ fhir:v "t" ] ] [ fhir:context [ fhir:v "t" ] ; fhir:element [ fhir:v "chromosome" ] ; fhir:variable [ fhir:v "tc" ] ; fhir:transform [ fhir:v "create" ] ; fhir:parameter ( [ fhir:value [ fhir:v "CodeableConcept" ] ] ) ] [ fhir:context [ fhir:v "tc" ] ; fhir:element [ fhir:v "coding" ] ; fhir:variable [ fhir:v "tcc" ] ; fhir:transform [ fhir:v "create" ] ; fhir:parameter ( [ fhir:value [ fhir:v "Coding" ] ] ) ] [ fhir:context [ fhir:v "tcc" ] ; fhir:element [ fhir:v "system" ] ; fhir:transform [ fhir:v "copy" ] ; fhir:parameter ( [ fhir:value [ fhir:v "http://loinc.org" ] ] ) ] [ fhir:context [ fhir:v "tcc" ] ; fhir:element [ fhir:v "code" ] ; fhir:transform [ fhir:v "copy" ] ; fhir:parameter ( [ fhir:value [ fhir:v "LA21272-2" ] ] ) ] [ fhir:context [ fhir:v "tcc" ] ; fhir:element [ fhir:v "display" ] ; fhir:transform [ fhir:v "copy" ] ; fhir:parameter ( [ fhir:value [ fhir:v "Chromosome 19" ] ] ) ] ) ] [ fhir:name [ fhir:v "chromosome" ] ; fhir:source ( [ fhir:context [ fhir:v "src" ] ; fhir:element [ fhir:v "chromosome" ] ; fhir:variable [ fhir:v "s" ] ; fhir:condition [ fhir:v "code = '20'" ] ] ) ; fhir:target ( [ fhir:context [ fhir:v "tgt" ] ; fhir:element [ fhir:v "startingSequence" ] ; fhir:variable [ fhir:v "t" ] ] [ fhir:context [ fhir:v "t" ] ; fhir:element [ fhir:v "chromosome" ] ; fhir:variable [ fhir:v "tc" ] ; fhir:transform [ fhir:v "create" ] ; fhir:parameter ( [ fhir:value [ fhir:v "CodeableConcept" ] ] ) ] [ fhir:context [ fhir:v "tc" ] ; fhir:element [ fhir:v "coding" ] ; fhir:variable [ fhir:v "tcc" ] ; fhir:transform [ fhir:v "create" ] ; fhir:parameter ( [ fhir:value [ fhir:v "Coding" ] ] ) ] [ fhir:context [ fhir:v "tcc" ] ; fhir:element [ fhir:v "system" ] ; fhir:transform [ fhir:v "copy" ] ; fhir:parameter ( [ fhir:value [ fhir:v "http://loinc.org" ] ] ) ] [ fhir:context [ fhir:v "tcc" ] ; fhir:element [ fhir:v "code" ] ; fhir:transform [ fhir:v "copy" ] ; fhir:parameter ( [ fhir:value [ fhir:v "LA21273-0" ] ] ) ] [ fhir:context [ fhir:v "tcc" ] ; fhir:element [ fhir:v "display" ] ; fhir:transform [ fhir:v "copy" ] ; fhir:parameter ( [ fhir:value [ fhir:v "Chromosome 20" ] ] ) ] ) ] [ fhir:name [ fhir:v "chromosome" ] ; fhir:source ( [ fhir:context [ fhir:v "src" ] ; fhir:element [ fhir:v "chromosome" ] ; fhir:variable [ fhir:v "s" ] ; fhir:condition [ fhir:v "code = '21'" ] ] ) ; fhir:target ( [ fhir:context [ fhir:v "tgt" ] ; fhir:element [ fhir:v "startingSequence" ] ; fhir:variable [ fhir:v "t" ] ] [ fhir:context [ fhir:v "t" ] ; fhir:element [ fhir:v "chromosome" ] ; fhir:variable [ fhir:v "tc" ] ; fhir:transform [ fhir:v "create" ] ; fhir:parameter ( [ fhir:value [ fhir:v "CodeableConcept" ] ] ) ] [ fhir:context [ fhir:v "tc" ] ; fhir:element [ fhir:v "coding" ] ; fhir:variable [ fhir:v "tcc" ] ; fhir:transform [ fhir:v "create" ] ; fhir:parameter ( [ fhir:value [ fhir:v "Coding" ] ] ) ] [ fhir:context [ fhir:v "tcc" ] ; fhir:element [ fhir:v "system" ] ; fhir:transform [ fhir:v "copy" ] ; fhir:parameter ( [ fhir:value [ fhir:v "http://loinc.org" ] ] ) ] [ fhir:context [ fhir:v "tcc" ] ; fhir:element [ fhir:v "code" ] ; fhir:transform [ fhir:v "copy" ] ; fhir:parameter ( [ fhir:value [ fhir:v "LA21274-8" ] ] ) ] [ fhir:context [ fhir:v "tcc" ] ; fhir:element [ fhir:v "display" ] ; fhir:transform [ fhir:v "copy" ] ; fhir:parameter ( [ fhir:value [ fhir:v "Chromosome 21" ] ] ) ] ) ] [ fhir:name [ fhir:v "chromosome" ] ; fhir:source ( [ fhir:context [ fhir:v "src" ] ; fhir:element [ fhir:v "chromosome" ] ; fhir:variable [ fhir:v "s" ] ; fhir:condition [ fhir:v "code = '22'" ] ] ) ; fhir:target ( [ fhir:context [ fhir:v "tgt" ] ; fhir:element [ fhir:v "startingSequence" ] ; fhir:variable [ fhir:v "t" ] ] [ fhir:context [ fhir:v "t" ] ; fhir:element [ fhir:v "chromosome" ] ; fhir:variable [ fhir:v "tc" ] ; fhir:transform [ fhir:v "create" ] ; fhir:parameter ( [ fhir:value [ fhir:v "CodeableConcept" ] ] ) ] [ fhir:context [ fhir:v "tc" ] ; fhir:element [ fhir:v "coding" ] ; fhir:variable [ fhir:v "tcc" ] ; fhir:transform [ fhir:v "create" ] ; fhir:parameter ( [ fhir:value [ fhir:v "Coding" ] ] ) ] [ fhir:context [ fhir:v "tcc" ] ; fhir:element [ fhir:v "system" ] ; fhir:transform [ fhir:v "copy" ] ; fhir:parameter ( [ fhir:value [ fhir:v "http://loinc.org" ] ] ) ] [ fhir:context [ fhir:v "tcc" ] ; fhir:element [ fhir:v "code" ] ; fhir:transform [ fhir:v "copy" ] ; fhir:parameter ( [ fhir:value [ fhir:v "LA21275-5" ] ] ) ] [ fhir:context [ fhir:v "tcc" ] ; fhir:element [ fhir:v "display" ] ; fhir:transform [ fhir:v "copy" ] ; fhir:parameter ( [ fhir:value [ fhir:v "Chromosome 22" ] ] ) ] ) ] [ fhir:name [ fhir:v "chromosome" ] ; fhir:source ( [ fhir:context [ fhir:v "src" ] ; fhir:element [ fhir:v "chromosome" ] ; fhir:variable [ fhir:v "s" ] ; fhir:condition [ fhir:v "code = 'X'" ] ] ) ; fhir:target ( [ fhir:context [ fhir:v "tgt" ] ; fhir:element [ fhir:v "startingSequence" ] ; fhir:variable [ fhir:v "t" ] ] [ fhir:context [ fhir:v "t" ] ; fhir:element [ fhir:v "chromosome" ] ; fhir:variable [ fhir:v "tc" ] ; fhir:transform [ fhir:v "create" ] ; fhir:parameter ( [ fhir:value [ fhir:v "CodeableConcept" ] ] ) ] [ fhir:context [ fhir:v "tc" ] ; fhir:element [ fhir:v "coding" ] ; fhir:variable [ fhir:v "tcc" ] ; fhir:transform [ fhir:v "create" ] ; fhir:parameter ( [ fhir:value [ fhir:v "Coding" ] ] ) ] [ fhir:context [ fhir:v "tcc" ] ; fhir:element [ fhir:v "system" ] ; fhir:transform [ fhir:v "copy" ] ; fhir:parameter ( [ fhir:value [ fhir:v "http://loinc.org" ] ] ) ] [ fhir:context [ fhir:v "tcc" ] ; fhir:element [ fhir:v "code" ] ; fhir:transform [ fhir:v "copy" ] ; fhir:parameter ( [ fhir:value [ fhir:v "LA21276-3" ] ] ) ] [ fhir:context [ fhir:v "tcc" ] ; fhir:element [ fhir:v "display" ] ; fhir:transform [ fhir:v "copy" ] ; fhir:parameter ( [ fhir:value [ fhir:v "Chromosome X" ] ] ) ] ) ] [ fhir:name [ fhir:v "chromosome" ] ; fhir:source ( [ fhir:context [ fhir:v "src" ] ; fhir:element [ fhir:v "chromosome" ] ; fhir:variable [ fhir:v "s" ] ; fhir:condition [ fhir:v "code = 'Y'" ] ] ) ; fhir:target ( [ fhir:context [ fhir:v "tgt" ] ; fhir:element [ fhir:v "startingSequence" ] ; fhir:variable [ fhir:v "t" ] ] [ fhir:context [ fhir:v "t" ] ; fhir:element [ fhir:v "chromosome" ] ; fhir:variable [ fhir:v "tc" ] ; fhir:transform [ fhir:v "create" ] ; fhir:parameter ( [ fhir:value [ fhir:v "CodeableConcept" ] ] ) ] [ fhir:context [ fhir:v "tc" ] ; fhir:element [ fhir:v "coding" ] ; fhir:variable [ fhir:v "tcc" ] ; fhir:transform [ fhir:v "create" ] ; fhir:parameter ( [ fhir:value [ fhir:v "Coding" ] ] ) ] [ fhir:context [ fhir:v "tcc" ] ; fhir:element [ fhir:v "system" ] ; fhir:transform [ fhir:v "copy" ] ; fhir:parameter ( [ fhir:value [ fhir:v "http://loinc.org" ] ] ) ] [ fhir:context [ fhir:v "tcc" ] ; fhir:element [ fhir:v "code" ] ; fhir:transform [ fhir:v "copy" ] ; fhir:parameter ( [ fhir:value [ fhir:v "LA21277-1" ] ] ) ] [ fhir:context [ fhir:v "tcc" ] ; fhir:element [ fhir:v "display" ] ; fhir:transform [ fhir:v "copy" ] ; fhir:parameter ( [ fhir:value [ fhir:v "Chromosome Y" ] ] ) ] ) ] [ fhir:name [ fhir:v "referenceSeqIdCodeableConcept" ] ; fhir:source ( [ fhir:context [ fhir:v "src" ] ; fhir:type [ fhir:v "CodeableConcept" ] ; fhir:element [ fhir:v "referenceSeqId" ] ; fhir:variable [ fhir:v "s" ] ] ) ; fhir:target ( [ fhir:context [ fhir:v "tgt" ] ; fhir:element [ fhir:v "startingSequence" ] ; fhir:variable [ fhir:v "t" ] ] [ fhir:context [ fhir:v "t" ] ; fhir:element [ fhir:v "sequence" ] ; fhir:transform [ fhir:v "copy" ] ; fhir:parameter ( [ fhir:value [ fhir:v "s" ] ] ) ] ) ] [ fhir:name [ fhir:v "referenceSeqPointerReference" ] ; fhir:source ( [ fhir:context [ fhir:v "src" ] ; fhir:type [ fhir:v "Reference" ] ; fhir:element [ fhir:v "referenceSeqPointer" ] ; fhir:variable [ fhir:v "s" ] ] ) ; fhir:target ( [ fhir:context [ fhir:v "tgt" ] ; fhir:element [ fhir:v "startingSequence" ] ; fhir:variable [ fhir:v "t" ] ] [ fhir:context [ fhir:v "t" ] ; fhir:element [ fhir:v "sequence" ] ; fhir:transform [ fhir:v "copy" ] ; fhir:parameter ( [ fhir:value [ fhir:v "s" ] ] ) ] ) ] [ fhir:name [ fhir:v "referenceSeqStringString" ] ; fhir:source ( [ fhir:context [ fhir:v "src" ] ; fhir:type [ fhir:v "string" ] ; fhir:element [ fhir:v "referenceSeqString" ] ; fhir:variable [ fhir:v "s" ] ] ) ; fhir:target ( [ fhir:context [ fhir:v "tgt" ] ; fhir:element [ fhir:v "startingSequence" ] ; fhir:variable [ fhir:v "t" ] ] [ fhir:context [ fhir:v "t" ] ; fhir:element [ fhir:v "sequence" ] ; fhir:transform [ fhir:v "copy" ] ; fhir:parameter ( [ fhir:value [ fhir:v "s" ] ] ) ] ) ] [ fhir:name [ fhir:v "windowStartInteger" ] ; fhir:source ( [ fhir:context [ fhir:v "src" ] ; fhir:type [ fhir:v "integer" ] ; fhir:element [ fhir:v "windowStart" ] ; fhir:variable [ fhir:v "s" ] ] ) ; fhir:target ( [ fhir:context [ fhir:v "tgt" ] ; fhir:element [ fhir:v "startingSequence" ] ; fhir:variable [ fhir:v "t" ] ] [ fhir:context [ fhir:v "t" ] ; fhir:element [ fhir:v "windowStart" ] ; fhir:transform [ fhir:v "copy" ] ; fhir:parameter ( [ fhir:value [ fhir:v "s" ] ] ) ] ) ] [ fhir:name [ fhir:v "windowEndInteger" ] ; fhir:source ( [ fhir:context [ fhir:v "src" ] ; fhir:type [ fhir:v "integer" ] ; fhir:element [ fhir:v "windowEnd" ] ; fhir:variable [ fhir:v "s" ] ] ) ; fhir:target ( [ fhir:context [ fhir:v "tgt" ] ; fhir:element [ fhir:v "startingSequence" ] ; fhir:variable [ fhir:v "t" ] ] [ fhir:context [ fhir:v "t" ] ; fhir:element [ fhir:v "windowEnd" ] ; fhir:transform [ fhir:v "copy" ] ; fhir:parameter ( [ fhir:value [ fhir:v "s" ] ] ) ] ) ] [ fhir:name [ fhir:v "orientation" ] ; fhir:source ( [ fhir:context [ fhir:v "src" ] ; fhir:element [ fhir:v "orientation" ] ; fhir:variable [ fhir:v "v" ] ] ) ; fhir:target ( [ fhir:context [ fhir:v "tgt" ] ; fhir:element [ fhir:v "startingSequence" ] ; fhir:variable [ fhir:v "t" ] ] [ fhir:context [ fhir:v "t" ] ; fhir:element [ fhir:v "orientation" ] ; fhir:transform [ fhir:v "translate" ] ; fhir:parameter ( [ fhir:value [ fhir:v "v" ] ] [ fhir:value [ fhir:v "http://hl7.org/fhir/ConceptMap/MolecularSequence.referenceSeq.orientation-R4toR5" ] ] [ fhir:value [ fhir:v "code" ] ] ) ] ) ] [ fhir:name [ fhir:v "strand" ] ; fhir:source ( [ fhir:context [ fhir:v "src" ] ; fhir:element [ fhir:v "strand" ] ; fhir:variable [ fhir:v "v" ] ] ) ; fhir:target ( [ fhir:context [ fhir:v "tgt" ] ; fhir:element [ fhir:v "startingSequence" ] ; fhir:variable [ fhir:v "t" ] ] [ fhir:context [ fhir:v "t" ] ; fhir:element [ fhir:v "strand" ] ; fhir:transform [ fhir:v "translate" ] ; fhir:parameter ( [ fhir:value [ fhir:v "v" ] ] [ fhir:value [ fhir:v "http://hl7.org/fhir/ConceptMap/MolecularSequence.referenceSeq.strand-R4toR5" ] ] [ fhir:value [ fhir:v "code" ] ] ) ] ) ] ) ] [ fhir:name [ fhir:v "MolecularSequenceVariant" ] ; fhir:extends [ fhir:v "BackboneElement" ] ; fhir:input ( [ fhir:name [ fhir:v "src" ] ; fhir:mode [ fhir:v "source" ] ] [ fhir:name [ fhir:v "tgt" ] ; fhir:mode [ fhir:v "target" ] ] ) ; fhir:rule ( [ fhir:name [ fhir:v "startInteger" ] ; fhir:source ( [ fhir:context [ fhir:v "src" ] ; fhir:type [ fhir:v "integer" ] ; fhir:element [ fhir:v "start" ] ; fhir:variable [ fhir:v "s" ] ] ) ; fhir:target ( [ fhir:context [ fhir:v "tgt" ] ; fhir:element [ fhir:v "edit" ] ; fhir:variable [ fhir:v "t" ] ] [ fhir:context [ fhir:v "t" ] ; fhir:element [ fhir:v "start" ] ; fhir:transform [ fhir:v "copy" ] ; fhir:parameter ( [ fhir:value [ fhir:v "s" ] ] ) ] ) ] [ fhir:name [ fhir:v "endInteger" ] ; fhir:source ( [ fhir:context [ fhir:v "src" ] ; fhir:type [ fhir:v "integer" ] ; fhir:element [ fhir:v "end" ] ; fhir:variable [ fhir:v "s" ] ] ) ; fhir:target ( [ fhir:context [ fhir:v "tgt" ] ; fhir:element [ fhir:v "edit" ] ; fhir:variable [ fhir:v "t" ] ] [ fhir:context [ fhir:v "t" ] ; fhir:element [ fhir:v "end" ] ; fhir:transform [ fhir:v "copy" ] ; fhir:parameter ( [ fhir:value [ fhir:v "s" ] ] ) ] ) ] [ fhir:name [ fhir:v "observedAllele" ] ; fhir:source ( [ fhir:context [ fhir:v "src" ] ; fhir:element [ fhir:v "observedAllele" ] ; fhir:variable [ fhir:v "s" ] ] ) ; fhir:target ( [ fhir:context [ fhir:v "tgt" ] ; fhir:element [ fhir:v "edit" ] ; fhir:variable [ fhir:v "t" ] ] [ fhir:context [ fhir:v "t" ] ; fhir:element [ fhir:v "replacementSequence" ] ; fhir:transform [ fhir:v "copy" ] ; fhir:parameter ( [ fhir:value [ fhir:v "s" ] ] ) ] ) ] [ fhir:name [ fhir:v "referenceAllele" ] ; fhir:source ( [ fhir:context [ fhir:v "src" ] ; fhir:element [ fhir:v "referenceAllele" ] ; fhir:variable [ fhir:v "s" ] ] ) ; fhir:target ( [ fhir:context [ fhir:v "tgt" ] ; fhir:element [ fhir:v "edit" ] ; fhir:variable [ fhir:v "t" ] ] [ fhir:context [ fhir:v "t" ] ; fhir:element [ fhir:v "replacedSequence" ] ; fhir:transform [ fhir:v "copy" ] ; fhir:parameter ( [ fhir:value [ fhir:v "s" ] ] ) ] ) ] ) ] ) . # # -------------------------------------------------------------------------------------