This is the initial release of the Clinical Genomics Incubator Implementation Guide for Additional Resources for initial ballot May 2026.
first
true
category
Diagnostics
title
Clinical Genomics Incubator Implementation Guide for Additional Resources
introduction
The Clinical Genomics Incubator Implementation Guide for Additional Resources hosts two main genomic resources, Genomic Study and Molecular Definition, to be leveraged by Genomics Reporting and Molecular Definition Data Types Implementation Guides.
ci-build
http://build.fhir.org/ig/HL7/cg-incubator
RelatedIgs
(None Found)
This IG has never been published
No publication description (`registry-description`) found (needed for first publication)
No publication country (`registry-country`) found (needed for first publication)
No publication authority (`registry-authority`) found (needed for first publication)
Unable to compare with previous version: Unable to find version history at http://hl7.org/fhir/uv/cg-incubator (Problem #1 with package-list.json at http://hl7.org/fhir/uv/cg-incubator: 404 Not Found)
IPA Comparison:
n/a
IPS Comparison:
n/a
Validation Flags:
On: autoLoad; Off: hintAboutNonMustSupport, anyExtensionsAllowed, checkAggregation, showReferenceMessages, noExperimentalContent, displayWarnings
The jira specification file appears to be out of date with the versions, artifacts and pages currently defined in the IG. A proposed revised file to be reviewed and, if appropriate, submitted as a pull request against the XML folder in https://github.com/HL7/JIRA-Spec-Artifacts. To see the differences, perform a file compare on 'template/jira-current.xml' (a normalized view of what is in Github) and 'template/jira-new.xml' (reflects current IG content)
en/StructureDefinition-MolecularDefinition.html
information
The html source contains the word 'SHOULD' but it is not in a text phrase marked as a conformance clause: 'The resolvable element can be used to represent a sequence by reference, but it also implies that the sequence is accessible and SHOULD be resolvable (although a security layer may be present). This element makes use of the Document Reference resource, which contains the content.attachment element. The Attachment datatype can be used to represent sequences that are captured as a formatted file (using .contentType and .data) or as a URL (using .contentType and .url).'CONFORMANCE_STATEMENT_WORD
Constraint failed: eld-31: 'additionalBindings should have a key (key.exists())' (defined in http://hl7.org/fhir/StructureDefinition/ElementDefinition) (Best Practice Recommendation)http://hl7.org/fhir/StructureDefinition/ElementDefinition#eld-31
SearchParameter/GenomicStudy-identifier: SearchParameter: Validated against fhir.SearchParameter
SearchParameter/GenomicStudy-status: SearchParameter: Validated against fhir.SearchParameter
SearchParameter/GenomicStudy-patient: SearchParameter: Validated against fhir.SearchParameter
SearchParameter/GenomicStudy-subject: SearchParameter: Validated against fhir.SearchParameter
SearchParameter/GenomicStudy-focus: SearchParameter: Validated against fhir.SearchParameter
Path
Severity
Message
Validating
SearchParameter (l1/c2488)
warning
Constraint failed: spd-6: 'Values for multipleOr and multipleAnd should be provided for clarity (multipleOr.exists() and multipleAnd.exists())' (defined in http://hl7.org/fhir/StructureDefinition/SearchParameter)http://hl7.org/fhir/StructureDefinition/SearchParameter#spd-6
The resource SearchParameter/GenomicStudy-identifier could usefully have an OID assigned (OIDs are easy to assign - see https://build.fhir.org/ig/FHIR/fhir-tools-ig/CodeSystem-ig-parameters.html#ig-parameters-auto-oid-root)
--
Resource
information
The resource SearchParameter/GenomicStudy-status could usefully have an OID assigned (OIDs are easy to assign - see https://build.fhir.org/ig/FHIR/fhir-tools-ig/CodeSystem-ig-parameters.html#ig-parameters-auto-oid-root)
--
Resource
information
The resource SearchParameter/GenomicStudy-patient could usefully have an OID assigned (OIDs are easy to assign - see https://build.fhir.org/ig/FHIR/fhir-tools-ig/CodeSystem-ig-parameters.html#ig-parameters-auto-oid-root)
--
Resource
information
The resource SearchParameter/GenomicStudy-subject could usefully have an OID assigned (OIDs are easy to assign - see https://build.fhir.org/ig/FHIR/fhir-tools-ig/CodeSystem-ig-parameters.html#ig-parameters-auto-oid-root)
--
Resource
information
The resource SearchParameter/GenomicStudy-focus could usefully have an OID assigned (OIDs are easy to assign - see https://build.fhir.org/ig/FHIR/fhir-tools-ig/CodeSystem-ig-parameters.html#ig-parameters-auto-oid-root)
--
SearchParameter (l1/c2432)
warning
Constraint failed: spd-6: 'Values for multipleOr and multipleAnd should be provided for clarity (multipleOr.exists() and multipleAnd.exists())' (defined in http://hl7.org/fhir/StructureDefinition/SearchParameter)http://hl7.org/fhir/StructureDefinition/SearchParameter#spd-6
Constraint failed: spd-6: 'Values for multipleOr and multipleAnd should be provided for clarity (multipleOr.exists() and multipleAnd.exists())' (defined in http://hl7.org/fhir/StructureDefinition/SearchParameter)http://hl7.org/fhir/StructureDefinition/SearchParameter#spd-6
Constraint failed: spd-6: 'Values for multipleOr and multipleAnd should be provided for clarity (multipleOr.exists() and multipleAnd.exists())' (defined in http://hl7.org/fhir/StructureDefinition/SearchParameter)http://hl7.org/fhir/StructureDefinition/SearchParameter#spd-6
Constraint failed: spd-6: 'Values for multipleOr and multipleAnd should be provided for clarity (multipleOr.exists() and multipleAnd.exists())' (defined in http://hl7.org/fhir/StructureDefinition/SearchParameter)http://hl7.org/fhir/StructureDefinition/SearchParameter#spd-6
A definition could not be found for Canonical URL 'http://hl7.org/fhir/StructureDefinition/shareablecodesystem'TYPE_SPECIFIC_CHECKS_DT_CANONICAL_RESOLVE
Most code systems defined in HL7 IGs will need to move to THO later during the process. Consider giving this code system a THO URL now (See https://confluence.hl7.org/display/TSMG/Terminology+Play+Book, and/or talk to TSMG)CODESYSTEM_THO_CHECK
--
CodeSystem.meta.profile[0] (l1/c3864)
warning
Profile reference 'http://hl7.org/fhir/StructureDefinition/shareablecodesystem' has not been checked because it could not be found, and the validator is set to not fetch unknown profilesVALIDATION_VAL_PROFILE_UNKNOWN_NOT_POLICY
A definition could not be found for Canonical URL 'http://hl7.org/fhir/StructureDefinition/shareablecodesystem'TYPE_SPECIFIC_CHECKS_DT_CANONICAL_RESOLVE
Most code systems defined in HL7 IGs will need to move to THO later during the process. Consider giving this code system a THO URL now (See https://confluence.hl7.org/display/TSMG/Terminology+Play+Book, and/or talk to TSMG)CODESYSTEM_THO_CHECK
--
CodeSystem.meta.profile[0] (l1/c15753)
warning
Profile reference 'http://hl7.org/fhir/StructureDefinition/shareablecodesystem' has not been checked because it could not be found, and the validator is set to not fetch unknown profilesVALIDATION_VAL_PROFILE_UNKNOWN_NOT_POLICY
A definition could not be found for Canonical URL 'http://hl7.org/fhir/StructureDefinition/shareablecodesystem'TYPE_SPECIFIC_CHECKS_DT_CANONICAL_RESOLVE
Most code systems defined in HL7 IGs will need to move to THO later during the process. Consider giving this code system a THO URL now (See https://confluence.hl7.org/display/TSMG/Terminology+Play+Book, and/or talk to TSMG)CODESYSTEM_THO_CHECK
--
CodeSystem.meta.profile[0] (l1/c34986)
warning
Profile reference 'http://hl7.org/fhir/StructureDefinition/shareablecodesystem' has not been checked because it could not be found, and the validator is set to not fetch unknown profilesVALIDATION_VAL_PROFILE_UNKNOWN_NOT_POLICY
A definition could not be found for Canonical URL 'http://hl7.org/fhir/StructureDefinition/shareablecodesystem'TYPE_SPECIFIC_CHECKS_DT_CANONICAL_RESOLVE
Most code systems defined in HL7 IGs will need to move to THO later during the process. Consider giving this code system a THO URL now (See https://confluence.hl7.org/display/TSMG/Terminology+Play+Book, and/or talk to TSMG)CODESYSTEM_THO_CHECK
--
CodeSystem.meta.profile[0] (l1/c4491)
warning
Profile reference 'http://hl7.org/fhir/StructureDefinition/shareablecodesystem' has not been checked because it could not be found, and the validator is set to not fetch unknown profilesVALIDATION_VAL_PROFILE_UNKNOWN_NOT_POLICY
The resource CodeSystem/genomicstudy-regiontype must have an OID assigned to cater for possible use with OID based terminology systems e.g. CDA usage (OIDs are easy to assign - see https://build.fhir.org/ig/FHIR/fhir-tools-ig/CodeSystem-ig-parameters.html#ig-parameters-auto-oid-root)
A definition could not be found for Canonical URL 'http://hl7.org/fhir/StructureDefinition/shareablecodesystem'TYPE_SPECIFIC_CHECKS_DT_CANONICAL_RESOLVE
Most code systems defined in HL7 IGs will need to move to THO later during the process. Consider giving this code system a THO URL now (See https://confluence.hl7.org/display/TSMG/Terminology+Play+Book, and/or talk to TSMG)CODESYSTEM_THO_CHECK
--
CodeSystem.meta.profile[0] (l1/c4782)
warning
Profile reference 'http://hl7.org/fhir/StructureDefinition/shareablecodesystem' has not been checked because it could not be found, and the validator is set to not fetch unknown profilesVALIDATION_VAL_PROFILE_UNKNOWN_NOT_POLICY
A definition could not be found for Canonical URL 'http://hl7.org/fhir/StructureDefinition/shareablecodesystem'TYPE_SPECIFIC_CHECKS_DT_CANONICAL_RESOLVE
Most code systems defined in HL7 IGs will need to move to THO later during the process. Consider giving this code system a THO URL now (See https://confluence.hl7.org/display/TSMG/Terminology+Play+Book, and/or talk to TSMG)CODESYSTEM_THO_CHECK
--
CodeSystem.meta.profile[0] (l1/c7862)
warning
Profile reference 'http://hl7.org/fhir/StructureDefinition/shareablecodesystem' has not been checked because it could not be found, and the validator is set to not fetch unknown profilesVALIDATION_VAL_PROFILE_UNKNOWN_NOT_POLICY
Unable to find profile http://hl7.org/fhir/StructureDefinition/GenomicStudy|1.0.0 nominated as the profile for which resource /GenomicStudy/example is an example
None of the codings provided are in the value set 'Genomic Study Method Type VS' (http://hl7.org/fhir/uv/cg-incubator/ValueSet/genomicstudy-methodtype|0.1.0-ci-build), and a coding is recommended to come from this value set (codes = http://snomed.info/sct#117040002) (from server, see log, or see the servers logic) Terminology_TX_NoValid_3_CC
0ms tx-op
0ms http://hl7.org/fhir/uv/cg-incubator/ValueSet/genomicstudy-methodtype|0.1.0-ci-build: Analysing http://hl7.org/fhir/uv/cg-incubator/ValueSet/genomicstudy-methodtype|0.1.0-ci-build for validation purposes
0ms http://hl7.org/fhir/uv/cg-incubator/ValueSet/genomicstudy-methodtype|0.1.0-ci-build: Parameters: disp-lang=en, generate-narrative, default-to-latest
0ms http://hl7.org/fhir/uv/cg-incubator/ValueSet/genomicstudy-methodtype|0.1.0-ci-build: Prepare include[0]: "(http://hl7.org/fhir/uv/cg-incubator/CodeSystem/genomicstudy-methodtype)"
0ms http://hl7.org/fhir/uv/cg-incubator/ValueSet/genomicstudy-methodtype|0.1.0-ci-build: CodeSystem found: "http://hl7.org/fhir/uv/cg-incubator/CodeSystem/genomicstudy-methodtype|0.1.0-ci-build"
0ms http://hl7.org/fhir/uv/cg-incubator/ValueSet/genomicstudy-methodtype|0.1.0-ci-build: Validate "[http://snomed.info/sct#117040002 ("Nucleic acid sequencing (procedure)")]"
1ms http://hl7.org/fhir/uv/cg-incubator/ValueSet/genomicstudy-methodtype|0.1.0-ci-build: Check "http://snomed.info/sct#117040002"
1ms http://hl7.org/fhir/uv/cg-incubator/ValueSet/genomicstudy-methodtype|0.1.0-ci-build: Include for http://hl7.org/fhir/uv/cg-incubator/CodeSystem/genomicstudy-methodtype not considered for "http://snomed.info/sct"
A definition for CodeSystem 'http://www.sequenceontology.org' could not be found, so the code cannot be validated (from https://tx.fhir.org/r5) UNKNOWN_CODESYSTEM
None of the codings provided are in the value set 'Genomic Study Change Type VS' (http://hl7.org/fhir/uv/cg-incubator/ValueSet/genomicstudy-changetype|0.1.0-ci-build), and a coding is recommended to come from this value set (codes = http://www.sequenceontology.org#SO:0001483)Terminology_TX_NoValid_3_CC
None of the codings provided are in the value set 'Genomic Study Change Type VS' (http://hl7.org/fhir/uv/cg-incubator/ValueSet/genomicstudy-changetype|0.1.0-ci-build), and a coding is recommended to come from this value set (codes = http://www.sequenceontology.org#SO:0002007)Terminology_TX_NoValid_3_CC
None of the codings provided are in the value set 'Genomic Study Change Type VS' (http://hl7.org/fhir/uv/cg-incubator/ValueSet/genomicstudy-changetype|0.1.0-ci-build), and a coding is recommended to come from this value set (codes = http://www.sequenceontology.org#SO:1000032)Terminology_TX_NoValid_3_CC
A definition for CodeSystem 'http://www.genenames.org' could not be found, so the code cannot be validated (from https://tx.fhir.org/r5) UNKNOWN_CODESYSTEM
None of the codings provided are in the value set 'Genomic Study Method Type VS' (http://hl7.org/fhir/uv/cg-incubator/ValueSet/genomicstudy-methodtype|0.1.0-ci-build), and a coding is recommended to come from this value set (codes = http://snomed.info/sct#117040002) (from server, see log, or see the servers logic) Terminology_TX_NoValid_3_CC
0ms tx-op
0ms http://hl7.org/fhir/uv/cg-incubator/ValueSet/genomicstudy-methodtype|0.1.0-ci-build: Analysing http://hl7.org/fhir/uv/cg-incubator/ValueSet/genomicstudy-methodtype|0.1.0-ci-build for validation purposes
0ms http://hl7.org/fhir/uv/cg-incubator/ValueSet/genomicstudy-methodtype|0.1.0-ci-build: Parameters: disp-lang=en, generate-narrative, default-to-latest
0ms http://hl7.org/fhir/uv/cg-incubator/ValueSet/genomicstudy-methodtype|0.1.0-ci-build: Prepare include[0]: "(http://hl7.org/fhir/uv/cg-incubator/CodeSystem/genomicstudy-methodtype)"
0ms http://hl7.org/fhir/uv/cg-incubator/ValueSet/genomicstudy-methodtype|0.1.0-ci-build: CodeSystem found: "http://hl7.org/fhir/uv/cg-incubator/CodeSystem/genomicstudy-methodtype|0.1.0-ci-build"
0ms http://hl7.org/fhir/uv/cg-incubator/ValueSet/genomicstudy-methodtype|0.1.0-ci-build: Validate "[http://snomed.info/sct#117040002 ("Nucleic acid sequencing (procedure)")]"
1ms http://hl7.org/fhir/uv/cg-incubator/ValueSet/genomicstudy-methodtype|0.1.0-ci-build: Check "http://snomed.info/sct#117040002"
1ms http://hl7.org/fhir/uv/cg-incubator/ValueSet/genomicstudy-methodtype|0.1.0-ci-build: Include for http://hl7.org/fhir/uv/cg-incubator/CodeSystem/genomicstudy-methodtype not considered for "http://snomed.info/sct"
None of the codings provided are in the value set 'Genomic Study Change Type VS' (http://hl7.org/fhir/uv/cg-incubator/ValueSet/genomicstudy-changetype|0.1.0-ci-build), and a coding is recommended to come from this value set (codes = http://www.sequenceontology.org#SO:0001019)Terminology_TX_NoValid_3_CC
A definition for CodeSystem 'http://www.genenames.org' could not be found, so the code cannot be validated (from https://tx.fhir.org/r5) UNKNOWN_CODESYSTEM
Unable to find profile http://hl7.org/fhir/StructureDefinition/GenomicStudy|1.0.0 nominated as the profile for which resource /GenomicStudy/example-lungMass is an example
A definition for CodeSystem 'http://www.sequenceontology.org' could not be found, so the code cannot be validated (from https://tx.fhir.org/r5) UNKNOWN_CODESYSTEM
None of the codings provided are in the value set 'Genomic Study Change Type VS' (http://hl7.org/fhir/uv/cg-incubator/ValueSet/genomicstudy-changetype|0.1.0-ci-build), and a coding is recommended to come from this value set (codes = http://www.sequenceontology.org#SO:0001483)Terminology_TX_NoValid_3_CC
None of the codings provided are in the value set 'Genomic Study Change Type VS' (http://hl7.org/fhir/uv/cg-incubator/ValueSet/genomicstudy-changetype|0.1.0-ci-build), and a coding is recommended to come from this value set (codes = http://www.sequenceontology.org#SO:0001019)Terminology_TX_NoValid_3_CC
Unable to find profile http://hl7.org/fhir/StructureDefinition/GenomicStudy|1.0.0 nominated as the profile for which resource /GenomicStudy/example-pgx is an example
A definition for CodeSystem 'http://www.sequenceontology.org' could not be found, so the code cannot be validated (from https://tx.fhir.org/r5) UNKNOWN_CODESYSTEM
None of the codings provided are in the value set 'Genomic Study Change Type VS' (http://hl7.org/fhir/uv/cg-incubator/ValueSet/genomicstudy-changetype|0.1.0-ci-build), and a coding is recommended to come from this value set (codes = http://www.sequenceontology.org#SO:0001483)Terminology_TX_NoValid_3_CC
None of the codings provided are in the value set 'Genomic Study Change Type VS' (http://hl7.org/fhir/uv/cg-incubator/ValueSet/genomicstudy-changetype|0.1.0-ci-build), and a coding is recommended to come from this value set (codes = http://www.sequenceontology.org#SO:0002007)Terminology_TX_NoValid_3_CC
None of the codings provided are in the value set 'Genomic Study Change Type VS' (http://hl7.org/fhir/uv/cg-incubator/ValueSet/genomicstudy-changetype|0.1.0-ci-build), and a coding is recommended to come from this value set (codes = http://www.sequenceontology.org#SO:1000032)Terminology_TX_NoValid_3_CC
None of the codings provided are in the value set 'Genomic Study Change Type VS' (http://hl7.org/fhir/uv/cg-incubator/ValueSet/genomicstudy-changetype|0.1.0-ci-build), and a coding is recommended to come from this value set (codes = http://www.sequenceontology.org#SO:0001019)Terminology_TX_NoValid_3_CC
None of the codings provided are in the value set 'Genomic Study Change Type VS' (http://hl7.org/fhir/uv/cg-incubator/ValueSet/genomicstudy-changetype|0.1.0-ci-build), and a coding is recommended to come from this value set (codes = http://www.sequenceontology.org#SO:0001565)Terminology_TX_NoValid_3_CC
None of the codings provided are in the value set 'Genomic Study Change Type VS' (http://hl7.org/fhir/uv/cg-incubator/ValueSet/genomicstudy-changetype|0.1.0-ci-build), and a coding is recommended to come from this value set (codes = http://www.sequenceontology.org#SO:0001576)Terminology_TX_NoValid_3_CC
Unable to find profile http://hl7.org/fhir/StructureDefinition/GenomicStudy|1.0.0 nominated as the profile for which resource /GenomicStudy/example-somaticStudy is an example
Unable to find profile http://hl7.org/fhir/StructureDefinition/GenomicStudy|1.0.0 nominated as the profile for which resource /GenomicStudy/example-trio2 is an example
Profile reference 'http://hl7.org/fhir/StructureDefinition/shareablevalueset' has not been checked because it could not be found, and the validator is set to not fetch unknown profilesVALIDATION_VAL_PROFILE_UNKNOWN_NOT_POLICY
Profile reference 'http://hl7.org/fhir/StructureDefinition/shareablevalueset' has not been checked because it could not be found, and the validator is set to not fetch unknown profilesVALIDATION_VAL_PROFILE_UNKNOWN_NOT_POLICY
Profile reference 'http://hl7.org/fhir/StructureDefinition/shareablevalueset' has not been checked because it could not be found, and the validator is set to not fetch unknown profilesVALIDATION_VAL_PROFILE_UNKNOWN_NOT_POLICY
Profile reference 'http://hl7.org/fhir/StructureDefinition/shareablevalueset' has not been checked because it could not be found, and the validator is set to not fetch unknown profilesVALIDATION_VAL_PROFILE_UNKNOWN_NOT_POLICY
The resource ValueSet/genomicstudy-regiontype must have an OID assigned to cater for possible use with OID based terminology systems e.g. CDA usage (OIDs are easy to assign - see https://build.fhir.org/ig/FHIR/fhir-tools-ig/CodeSystem-ig-parameters.html#ig-parameters-auto-oid-root)
Profile reference 'http://hl7.org/fhir/StructureDefinition/shareablevalueset' has not been checked because it could not be found, and the validator is set to not fetch unknown profilesVALIDATION_VAL_PROFILE_UNKNOWN_NOT_POLICY
Profile reference 'http://hl7.org/fhir/StructureDefinition/shareablevalueset' has not been checked because it could not be found, and the validator is set to not fetch unknown profilesVALIDATION_VAL_PROFILE_UNKNOWN_NOT_POLICY
The resource ValueSet/hgnc-vs must have an OID assigned to cater for possible use with OID based terminology systems e.g. CDA usage (OIDs are easy to assign - see https://build.fhir.org/ig/FHIR/fhir-tools-ig/CodeSystem-ig-parameters.html#ig-parameters-auto-oid-root)
--
ValueSet.where(id = 'hgnc-vs')
warning
Error from https://tx.fhir.org/r5: Error: A definition for CodeSystem 'http://www.genenames.org' could not be found, so the value set cannot be expanded
(from server, see log)
The type MolecularDefinition is not legal because it is not defined in the FHIR specification. Other types must have a namespace on themSD_TYPE_NOT_LOCAL
Constraint failed: eld-31: 'additionalBindings should have a key (key.exists())' (defined in http://hl7.org/fhir/StructureDefinition/ElementDefinition) (Best Practice Recommendation)http://hl7.org/fhir/StructureDefinition/ElementDefinition#eld-31
SearchParameter/MolecularDefinition-identifier: SearchParameter: Validated against fhir.SearchParameter
SearchParameter/MolecularDefinition-moleculetype: SearchParameter: Validated against fhir.SearchParameter
SearchParameter/MolecularDefinition-topology: SearchParameter: Validated against fhir.SearchParameter
SearchParameter/MolecularDefinition-member: SearchParameter: Validated against fhir.SearchParameter
SearchParameter/MolecularDefinition-type: SearchParameter: Validated against fhir.SearchParameter
Path
Severity
Message
Validating
SearchParameter (l1/c2626)
warning
Constraint failed: spd-6: 'Values for multipleOr and multipleAnd should be provided for clarity (multipleOr.exists() and multipleAnd.exists())' (defined in http://hl7.org/fhir/StructureDefinition/SearchParameter)http://hl7.org/fhir/StructureDefinition/SearchParameter#spd-6
The resource SearchParameter/MolecularDefinition-identifier could usefully have an OID assigned (OIDs are easy to assign - see https://build.fhir.org/ig/FHIR/fhir-tools-ig/CodeSystem-ig-parameters.html#ig-parameters-auto-oid-root)
--
Resource
information
The resource SearchParameter/MolecularDefinition-moleculetype could usefully have an OID assigned (OIDs are easy to assign - see https://build.fhir.org/ig/FHIR/fhir-tools-ig/CodeSystem-ig-parameters.html#ig-parameters-auto-oid-root)
--
Resource
information
The resource SearchParameter/MolecularDefinition-topology could usefully have an OID assigned (OIDs are easy to assign - see https://build.fhir.org/ig/FHIR/fhir-tools-ig/CodeSystem-ig-parameters.html#ig-parameters-auto-oid-root)
--
Resource
information
The resource SearchParameter/MolecularDefinition-member could usefully have an OID assigned (OIDs are easy to assign - see https://build.fhir.org/ig/FHIR/fhir-tools-ig/CodeSystem-ig-parameters.html#ig-parameters-auto-oid-root)
--
Resource
information
The resource SearchParameter/MolecularDefinition-type could usefully have an OID assigned (OIDs are easy to assign - see https://build.fhir.org/ig/FHIR/fhir-tools-ig/CodeSystem-ig-parameters.html#ig-parameters-auto-oid-root)
--
SearchParameter (l1/c2658)
warning
Constraint failed: spd-6: 'Values for multipleOr and multipleAnd should be provided for clarity (multipleOr.exists() and multipleAnd.exists())' (defined in http://hl7.org/fhir/StructureDefinition/SearchParameter)http://hl7.org/fhir/StructureDefinition/SearchParameter#spd-6
Constraint failed: spd-6: 'Values for multipleOr and multipleAnd should be provided for clarity (multipleOr.exists() and multipleAnd.exists())' (defined in http://hl7.org/fhir/StructureDefinition/SearchParameter)http://hl7.org/fhir/StructureDefinition/SearchParameter#spd-6
Constraint failed: spd-6: 'Values for multipleOr and multipleAnd should be provided for clarity (multipleOr.exists() and multipleAnd.exists())' (defined in http://hl7.org/fhir/StructureDefinition/SearchParameter)http://hl7.org/fhir/StructureDefinition/SearchParameter#spd-6
Constraint failed: spd-6: 'Values for multipleOr and multipleAnd should be provided for clarity (multipleOr.exists() and multipleAnd.exists())' (defined in http://hl7.org/fhir/StructureDefinition/SearchParameter)http://hl7.org/fhir/StructureDefinition/SearchParameter#spd-6
A definition could not be found for Canonical URL 'http://hl7.org/fhir/StructureDefinition/shareablecodesystem'TYPE_SPECIFIC_CHECKS_DT_CANONICAL_RESOLVE
Most code systems defined in HL7 IGs will need to move to THO later during the process. Consider giving this code system a THO URL now (See https://confluence.hl7.org/display/TSMG/Terminology+Play+Book, and/or talk to TSMG)CODESYSTEM_THO_CHECK
--
CodeSystem.meta.profile[0] (l1/c10245)
warning
Profile reference 'http://hl7.org/fhir/StructureDefinition/shareablecodesystem' has not been checked because it could not be found, and the validator is set to not fetch unknown profilesVALIDATION_VAL_PROFILE_UNKNOWN_NOT_POLICY
The resource CodeSystem/amino-acid must have an OID assigned to cater for possible use with OID based terminology systems e.g. CDA usage (OIDs are easy to assign - see https://build.fhir.org/ig/FHIR/fhir-tools-ig/CodeSystem-ig-parameters.html#ig-parameters-auto-oid-root)
A definition could not be found for Canonical URL 'http://hl7.org/fhir/StructureDefinition/shareablecodesystem'TYPE_SPECIFIC_CHECKS_DT_CANONICAL_RESOLVE
Most code systems defined in HL7 IGs will need to move to THO later during the process. Consider giving this code system a THO URL now (See https://confluence.hl7.org/display/TSMG/Terminology+Play+Book, and/or talk to TSMG)CODESYSTEM_THO_CHECK
--
CodeSystem.meta.profile[0] (l1/c5812)
warning
Profile reference 'http://hl7.org/fhir/StructureDefinition/shareablecodesystem' has not been checked because it could not be found, and the validator is set to not fetch unknown profilesVALIDATION_VAL_PROFILE_UNKNOWN_NOT_POLICY
A definition could not be found for Canonical URL 'http://hl7.org/fhir/StructureDefinition/shareablecodesystem'TYPE_SPECIFIC_CHECKS_DT_CANONICAL_RESOLVE
Most code systems defined in HL7 IGs will need to move to THO later during the process. Consider giving this code system a THO URL now (See https://confluence.hl7.org/display/TSMG/Terminology+Play+Book, and/or talk to TSMG)CODESYSTEM_THO_CHECK
--
CodeSystem.meta.profile[0] (l1/c5733)
warning
Profile reference 'http://hl7.org/fhir/StructureDefinition/shareablecodesystem' has not been checked because it could not be found, and the validator is set to not fetch unknown profilesVALIDATION_VAL_PROFILE_UNKNOWN_NOT_POLICY
A definition could not be found for Canonical URL 'http://hl7.org/fhir/StructureDefinition/shareablecodesystem'TYPE_SPECIFIC_CHECKS_DT_CANONICAL_RESOLVE
Most code systems defined in HL7 IGs will need to move to THO later during the process. Consider giving this code system a THO URL now (See https://confluence.hl7.org/display/TSMG/Terminology+Play+Book, and/or talk to TSMG)CODESYSTEM_THO_CHECK
--
CodeSystem.meta.profile[0] (l1/c7653)
warning
Profile reference 'http://hl7.org/fhir/StructureDefinition/shareablecodesystem' has not been checked because it could not be found, and the validator is set to not fetch unknown profilesVALIDATION_VAL_PROFILE_UNKNOWN_NOT_POLICY
A definition could not be found for Canonical URL 'http://hl7.org/fhir/StructureDefinition/shareablecodesystem'TYPE_SPECIFIC_CHECKS_DT_CANONICAL_RESOLVE
Most code systems defined in HL7 IGs will need to move to THO later during the process. Consider giving this code system a THO URL now (See https://confluence.hl7.org/display/TSMG/Terminology+Play+Book, and/or talk to TSMG)CODESYSTEM_THO_CHECK
--
CodeSystem.meta.profile[0] (l1/c3741)
warning
Profile reference 'http://hl7.org/fhir/StructureDefinition/shareablecodesystem' has not been checked because it could not be found, and the validator is set to not fetch unknown profilesVALIDATION_VAL_PROFILE_UNKNOWN_NOT_POLICY
A definition could not be found for Canonical URL 'http://hl7.org/fhir/StructureDefinition/shareablecodesystem'TYPE_SPECIFIC_CHECKS_DT_CANONICAL_RESOLVE
Most code systems defined in HL7 IGs will need to move to THO later during the process. Consider giving this code system a THO URL now (See https://confluence.hl7.org/display/TSMG/Terminology+Play+Book, and/or talk to TSMG)CODESYSTEM_THO_CHECK
--
CodeSystem.meta.profile[0] (l1/c4227)
warning
Profile reference 'http://hl7.org/fhir/StructureDefinition/shareablecodesystem' has not been checked because it could not be found, and the validator is set to not fetch unknown profilesVALIDATION_VAL_PROFILE_UNKNOWN_NOT_POLICY
A definition could not be found for Canonical URL 'http://hl7.org/fhir/StructureDefinition/shareablecodesystem'TYPE_SPECIFIC_CHECKS_DT_CANONICAL_RESOLVE
Most code systems defined in HL7 IGs will need to move to THO later during the process. Consider giving this code system a THO URL now (See https://confluence.hl7.org/display/TSMG/Terminology+Play+Book, and/or talk to TSMG)CODESYSTEM_THO_CHECK
--
CodeSystem.meta.profile[0] (l1/c3495)
warning
Profile reference 'http://hl7.org/fhir/StructureDefinition/shareablecodesystem' has not been checked because it could not be found, and the validator is set to not fetch unknown profilesVALIDATION_VAL_PROFILE_UNKNOWN_NOT_POLICY
A definition could not be found for Canonical URL 'http://hl7.org/fhir/StructureDefinition/shareablecodesystem'TYPE_SPECIFIC_CHECKS_DT_CANONICAL_RESOLVE
Most code systems defined in HL7 IGs will need to move to THO later during the process. Consider giving this code system a THO URL now (See https://confluence.hl7.org/display/TSMG/Terminology+Play+Book, and/or talk to TSMG)CODESYSTEM_THO_CHECK
--
CodeSystem.meta.profile[0] (l1/c4114)
warning
Profile reference 'http://hl7.org/fhir/StructureDefinition/shareablecodesystem' has not been checked because it could not be found, and the validator is set to not fetch unknown profilesVALIDATION_VAL_PROFILE_UNKNOWN_NOT_POLICY
A definition could not be found for Canonical URL 'http://hl7.org/fhir/StructureDefinition/shareablecodesystem'TYPE_SPECIFIC_CHECKS_DT_CANONICAL_RESOLVE
Most code systems defined in HL7 IGs will need to move to THO later during the process. Consider giving this code system a THO URL now (See https://confluence.hl7.org/display/TSMG/Terminology+Play+Book, and/or talk to TSMG)CODESYSTEM_THO_CHECK
--
CodeSystem.meta.profile[0] (l1/c7639)
warning
Profile reference 'http://hl7.org/fhir/StructureDefinition/shareablecodesystem' has not been checked because it could not be found, and the validator is set to not fetch unknown profilesVALIDATION_VAL_PROFILE_UNKNOWN_NOT_POLICY
The resource CodeSystem/ncbi-taxonomy-fragment must have an OID assigned to cater for possible use with OID based terminology systems e.g. CDA usage (OIDs are easy to assign - see https://build.fhir.org/ig/FHIR/fhir-tools-ig/CodeSystem-ig-parameters.html#ig-parameters-auto-oid-root)
A definition could not be found for Canonical URL 'http://hl7.org/fhir/StructureDefinition/shareablecodesystem'TYPE_SPECIFIC_CHECKS_DT_CANONICAL_RESOLVE
Most code systems defined in HL7 IGs will need to move to THO later during the process. Consider giving this code system a THO URL now (See https://confluence.hl7.org/display/TSMG/Terminology+Play+Book, and/or talk to TSMG)CODESYSTEM_THO_CHECK
--
CodeSystem.meta.profile[0] (l1/c4907)
warning
Profile reference 'http://hl7.org/fhir/StructureDefinition/shareablecodesystem' has not been checked because it could not be found, and the validator is set to not fetch unknown profilesVALIDATION_VAL_PROFILE_UNKNOWN_NOT_POLICY
The resource CodeSystem/nucleotide-dna must have an OID assigned to cater for possible use with OID based terminology systems e.g. CDA usage (OIDs are easy to assign - see https://build.fhir.org/ig/FHIR/fhir-tools-ig/CodeSystem-ig-parameters.html#ig-parameters-auto-oid-root)
A definition could not be found for Canonical URL 'http://hl7.org/fhir/StructureDefinition/shareablecodesystem'TYPE_SPECIFIC_CHECKS_DT_CANONICAL_RESOLVE
Most code systems defined in HL7 IGs will need to move to THO later during the process. Consider giving this code system a THO URL now (See https://confluence.hl7.org/display/TSMG/Terminology+Play+Book, and/or talk to TSMG)CODESYSTEM_THO_CHECK
--
CodeSystem.meta.profile[0] (l1/c2724)
warning
Profile reference 'http://hl7.org/fhir/StructureDefinition/shareablecodesystem' has not been checked because it could not be found, and the validator is set to not fetch unknown profilesVALIDATION_VAL_PROFILE_UNKNOWN_NOT_POLICY
The resource CodeSystem/nucleotide-rna must have an OID assigned to cater for possible use with OID based terminology systems e.g. CDA usage (OIDs are easy to assign - see https://build.fhir.org/ig/FHIR/fhir-tools-ig/CodeSystem-ig-parameters.html#ig-parameters-auto-oid-root)
Unable to find profile http://hl7.org/fhir/StructureDefinition/MolecularDefinition|1.0.0 nominated as the profile for which resource /MolecularDefinition/example is an example
Unable to find profile http://hl7.org/fhir/StructureDefinition/MolecularDefinition|1.0.0 nominated as the profile for which resource /MolecularDefinition/example-allele1 is an example
Unable to find profile http://hl7.org/fhir/StructureDefinition/MolecularDefinition|1.0.0 nominated as the profile for which resource /MolecularDefinition/example-allele2 is an example
Unable to find profile http://hl7.org/fhir/StructureDefinition/MolecularDefinition|1.0.0 nominated as the profile for which resource /MolecularDefinition/example-allele3 is an example
Unable to find profile http://hl7.org/fhir/StructureDefinition/MolecularDefinition|1.0.0 nominated as the profile for which resource /MolecularDefinition/example-allele4 is an example
Unable to find profile http://hl7.org/fhir/StructureDefinition/MolecularDefinition|1.0.0 nominated as the profile for which resource /MolecularDefinition/example-allele5 is an example
Unable to find profile http://hl7.org/fhir/StructureDefinition/MolecularDefinition|1.0.0 nominated as the profile for which resource /MolecularDefinition/example-allele6 is an example
Unable to find profile http://hl7.org/fhir/StructureDefinition/MolecularDefinition|1.0.0 nominated as the profile for which resource /MolecularDefinition/example-allele7 is an example
A definition for CodeSystem 'http://www.pharmvar.org' could not be found, so the code cannot be validated (from https://tx.fhir.org/r5) UNKNOWN_CODESYSTEM
Unable to find profile http://hl7.org/fhir/StructureDefinition/MolecularDefinition|1.0.0 nominated as the profile for which resource /MolecularDefinition/example-allelesliced-cyp2c19-1016 is an example
Unable to find profile http://hl7.org/fhir/StructureDefinition/MolecularDefinition|1.0.0 nominated as the profile for which resource /MolecularDefinition/example-allelesliced-cyp2c19-661 is an example
A definition for CodeSystem 'http://www.pharmvar.org' could not be found, so the code cannot be validated (from https://tx.fhir.org/r5) UNKNOWN_CODESYSTEM
Unable to find profile http://hl7.org/fhir/StructureDefinition/MolecularDefinition|1.0.0 nominated as the profile for which resource /MolecularDefinition/example-allelesliced-cyp2c19-literal-only is an example
A definition for CodeSystem 'http://www.ebi.ac.uk/ipd/imgt/hla' could not be found, so the code cannot be validated (from https://tx.fhir.org/r5) UNKNOWN_CODESYSTEM
Unable to find profile http://hl7.org/fhir/StructureDefinition/MolecularDefinition|1.0.0 nominated as the profile for which resource /MolecularDefinition/example-allelesliced-hla00381 is an example
Unable to find profile http://hl7.org/fhir/StructureDefinition/MolecularDefinition|1.0.0 nominated as the profile for which resource /MolecularDefinition/example-allelesliced-pgx-var-1011 is an example
Unable to find profile http://hl7.org/fhir/StructureDefinition/MolecularDefinition|1.0.0 nominated as the profile for which resource /MolecularDefinition/example-allelesliced1 is an example
A definition for CodeSystem 'http://www.ncbi.nlm.nih.gov/refseq' could not be found, so the code cannot be validated (from https://tx.fhir.org/r5) UNKNOWN_CODESYSTEM
Unable to find profile http://hl7.org/fhir/StructureDefinition/MolecularDefinition|1.0.0 nominated as the profile for which resource /MolecularDefinition/example-genomic-cyp2c19-accession is an example
Unable to find profile http://hl7.org/fhir/StructureDefinition/MolecularDefinition|1.0.0 nominated as the profile for which resource /MolecularDefinition/example-genotype1 is an example
Unable to find profile http://hl7.org/fhir/StructureDefinition/MolecularDefinition|1.0.0 nominated as the profile for which resource /MolecularDefinition/example-haplotype1 is an example
Unable to find profile http://hl7.org/fhir/StructureDefinition/MolecularDefinition|1.0.0 nominated as the profile for which resource /MolecularDefinition/example-haplotype2 is an example
Unable to find profile http://hl7.org/fhir/StructureDefinition/MolecularDefinition|1.0.0 nominated as the profile for which resource /MolecularDefinition/example-replaced-sequence is an example
Unable to find profile http://hl7.org/fhir/StructureDefinition/MolecularDefinition|1.0.0 nominated as the profile for which resource /MolecularDefinition/example-replacement-sequence is an example
Unable to find profile http://hl7.org/fhir/StructureDefinition/MolecularDefinition|1.0.0 nominated as the profile for which resource /MolecularDefinition/example-sequence-a is an example
Unable to find profile http://hl7.org/fhir/StructureDefinition/MolecularDefinition|1.0.0 nominated as the profile for which resource /MolecularDefinition/example-sequence-a-aa-iupac is an example
Unable to find profile http://hl7.org/fhir/StructureDefinition/MolecularDefinition|1.0.0 nominated as the profile for which resource /MolecularDefinition/example-sequence-a-dna-iupac is an example
Unable to find profile http://hl7.org/fhir/StructureDefinition/MolecularDefinition|1.0.0 nominated as the profile for which resource /MolecularDefinition/example-sequence-af1961831-url is an example
Unable to find profile http://hl7.org/fhir/StructureDefinition/MolecularDefinition|1.0.0 nominated as the profile for which resource /MolecularDefinition/example-sequence-c is an example
Unable to find profile http://hl7.org/fhir/StructureDefinition/MolecularDefinition|1.0.0 nominated as the profile for which resource /MolecularDefinition/example-sequence-cgg is an example
Unable to find profile http://hl7.org/fhir/StructureDefinition/MolecularDefinition|1.0.0 nominated as the profile for which resource /MolecularDefinition/example-sequence-cyp2c19-Concatenated-regions is an example
Unable to find profile http://hl7.org/fhir/StructureDefinition/MolecularDefinition|1.0.0 nominated as the profile for which resource /MolecularDefinition/example-sequence-cyp2c19-accession is an example
Unable to find profile http://hl7.org/fhir/StructureDefinition/MolecularDefinition|1.0.0 nominated as the profile for which resource /MolecularDefinition/example-sequence-cyp2c19-attached is an example
Unable to find profile http://hl7.org/fhir/StructureDefinition/MolecularDefinition|1.0.0 nominated as the profile for which resource /MolecularDefinition/example-sequence-cyp2c19-downstream-region is an example
Unable to find profile http://hl7.org/fhir/StructureDefinition/MolecularDefinition|1.0.0 nominated as the profile for which resource /MolecularDefinition/example-sequence-cyp2c19-gene-region is an example
Unable to find profile http://hl7.org/fhir/StructureDefinition/MolecularDefinition|1.0.0 nominated as the profile for which resource /MolecularDefinition/example-sequence-cyp2c19-upstream-region is an example
Unable to find profile http://hl7.org/fhir/StructureDefinition/MolecularDefinition|1.0.0 nominated as the profile for which resource /MolecularDefinition/example-sequence-cyp2c19-url is an example
Unable to find profile http://hl7.org/fhir/StructureDefinition/MolecularDefinition|1.0.0 nominated as the profile for which resource /MolecularDefinition/example-sequence-fmr1 is an example
Unable to find profile http://hl7.org/fhir/StructureDefinition/MolecularDefinition|1.0.0 nominated as the profile for which resource /MolecularDefinition/example-sequence-fmr1-cgg-20x-edited-referenced is an example
Unable to find profile http://hl7.org/fhir/StructureDefinition/MolecularDefinition|1.0.0 nominated as the profile for which resource /MolecularDefinition/example-sequence-fmr1-cgg-20x-repeat is an example
Unable to find profile http://hl7.org/fhir/StructureDefinition/MolecularDefinition|1.0.0 nominated as the profile for which resource /MolecularDefinition/example-sequence-g is an example
Unable to find profile http://hl7.org/fhir/StructureDefinition/MolecularDefinition|1.0.0 nominated as the profile for which resource /MolecularDefinition/example-sequence-ggc is an example
Unable to find profile http://hl7.org/fhir/StructureDefinition/MolecularDefinition|1.0.0 nominated as the profile for which resource /MolecularDefinition/example-sequence-hla000011 is an example
Unable to find profile http://hl7.org/fhir/StructureDefinition/MolecularDefinition|1.0.0 nominated as the profile for which resource /MolecularDefinition/example-sequence-lrg584 is an example
Unable to find profile http://hl7.org/fhir/StructureDefinition/MolecularDefinition|1.0.0 nominated as the profile for which resource /MolecularDefinition/example-sequence-msh2 is an example
Unable to find profile http://hl7.org/fhir/StructureDefinition/MolecularDefinition|1.0.0 nominated as the profile for which resource /MolecularDefinition/example-sequence-nc00001010-url is an example
Unable to find profile http://hl7.org/fhir/StructureDefinition/MolecularDefinition|1.0.0 nominated as the profile for which resource /MolecularDefinition/example-sequence-nm0007694-url is an example
Unable to find profile http://hl7.org/fhir/StructureDefinition/MolecularDefinition|1.0.0 nominated as the profile for which resource /MolecularDefinition/example-sequence-repeat is an example
Unable to find profile http://hl7.org/fhir/StructureDefinition/MolecularDefinition|1.0.0 nominated as the profile for which resource /MolecularDefinition/example-sequence-t is an example
Unable to find profile http://hl7.org/fhir/StructureDefinition/MolecularDefinition|1.0.0 nominated as the profile for which resource /MolecularDefinition/example-sequence0-2b-concatenated is an example
Unable to find profile http://hl7.org/fhir/StructureDefinition/MolecularDefinition|1.0.0 nominated as the profile for which resource /MolecularDefinition/example-sequence1 is an example
Unable to find profile http://hl7.org/fhir/StructureDefinition/MolecularDefinition|1.0.0 nominated as the profile for which resource /MolecularDefinition/example-sequence1-2b-concatenated is an example
Unable to find profile http://hl7.org/fhir/StructureDefinition/MolecularDefinition|1.0.0 nominated as the profile for which resource /MolecularDefinition/example-sequence2-2b-concatenated is an example
Unable to find profile http://hl7.org/fhir/StructureDefinition/MolecularDefinition|1.0.0 nominated as the profile for which resource /MolecularDefinition/example-starting-sequence-2b-extracted is an example
Unable to find profile http://hl7.org/fhir/StructureDefinition/MolecularDefinition|1.0.0 nominated as the profile for which resource /MolecularDefinition/example-starting-sequence-2b-relative is an example
Unable to find profile http://hl7.org/fhir/StructureDefinition/MolecularDefinition|1.0.0 nominated as the profile for which resource /MolecularDefinition/example-variation-cyp2c19-1015-spdi is an example
Unable to find profile http://hl7.org/fhir/StructureDefinition/MolecularDefinition|1.0.0 nominated as the profile for which resource /MolecularDefinition/example-variation-cyp2c19-1015-vrs is an example
Unable to find profile http://hl7.org/fhir/StructureDefinition/MolecularDefinition|1.0.0 nominated as the profile for which resource /MolecularDefinition/example-variation-cyp2c19-1016-vcf is an example
Unable to find profile http://hl7.org/fhir/StructureDefinition/MolecularDefinition|1.0.0 nominated as the profile for which resource /MolecularDefinition/example-variation-cyp2c19-661 is an example
Unable to find profile http://hl7.org/fhir/StructureDefinition/MolecularDefinition|1.0.0 nominated as the profile for which resource /MolecularDefinition/example-variation-cyp2c19-991-hgvs is an example
Unable to find profile http://hl7.org/fhir/StructureDefinition/MolecularDefinition|1.0.0 nominated as the profile for which resource /MolecularDefinition/example-variation-pgx-var-1011 is an example
Unable to find profile http://hl7.org/fhir/StructureDefinition/MolecularDefinition|1.0.0 nominated as the profile for which resource /MolecularDefinition/example-variation-pgx-var-1012 is an example
Unable to find profile http://hl7.org/fhir/StructureDefinition/MolecularDefinition|1.0.0 nominated as the profile for which resource /MolecularDefinition/example-variation-pgx-var-1013 is an example
Unable to find profile http://hl7.org/fhir/StructureDefinition/MolecularDefinition|1.0.0 nominated as the profile for which resource /MolecularDefinition/example-variation-pgx-var-1014 is an example
Unable to find profile http://hl7.org/fhir/StructureDefinition/MolecularDefinition|1.0.0 nominated as the profile for which resource /MolecularDefinition/example-variation-pgx-var-1015 is an example
Unable to find profile http://hl7.org/fhir/StructureDefinition/MolecularDefinition|1.0.0 nominated as the profile for which resource /MolecularDefinition/example-variation-pgx-var-1016 is an example
Unable to find profile http://hl7.org/fhir/StructureDefinition/MolecularDefinition|1.0.0 nominated as the profile for which resource /MolecularDefinition/example-variation-pgx-var-1017 is an example
Unable to find profile http://hl7.org/fhir/StructureDefinition/MolecularDefinition|1.0.0 nominated as the profile for which resource /MolecularDefinition/example-variation-pgx-var-1018 is an example
Unable to find profile http://hl7.org/fhir/StructureDefinition/MolecularDefinition|1.0.0 nominated as the profile for which resource /MolecularDefinition/example-variation-pgx-var-1019 is an example
Unable to find profile http://hl7.org/fhir/StructureDefinition/MolecularDefinition|1.0.0 nominated as the profile for which resource /MolecularDefinition/example-variation-pgx-var-1020 is an example
Unable to find profile http://hl7.org/fhir/StructureDefinition/MolecularDefinition|1.0.0 nominated as the profile for which resource /MolecularDefinition/example-variation-pgx-var-1021 is an example
Unable to find profile http://hl7.org/fhir/StructureDefinition/MolecularDefinition|1.0.0 nominated as the profile for which resource /MolecularDefinition/example-variation1 is an example
Profile reference 'http://hl7.org/fhir/StructureDefinition/shareablevalueset' has not been checked because it could not be found, and the validator is set to not fetch unknown profilesVALIDATION_VAL_PROFILE_UNKNOWN_NOT_POLICY
The resource ValueSet/amino-acid-1letter-ambiguous must have an OID assigned to cater for possible use with OID based terminology systems e.g. CDA usage (OIDs are easy to assign - see https://build.fhir.org/ig/FHIR/fhir-tools-ig/CodeSystem-ig-parameters.html#ig-parameters-auto-oid-root)
Profile reference 'http://hl7.org/fhir/StructureDefinition/shareablevalueset' has not been checked because it could not be found, and the validator is set to not fetch unknown profilesVALIDATION_VAL_PROFILE_UNKNOWN_NOT_POLICY
The resource ValueSet/amino-acid-1letter-unambiguous must have an OID assigned to cater for possible use with OID based terminology systems e.g. CDA usage (OIDs are easy to assign - see https://build.fhir.org/ig/FHIR/fhir-tools-ig/CodeSystem-ig-parameters.html#ig-parameters-auto-oid-root)
Profile reference 'http://hl7.org/fhir/StructureDefinition/shareablevalueset' has not been checked because it could not be found, and the validator is set to not fetch unknown profilesVALIDATION_VAL_PROFILE_UNKNOWN_NOT_POLICY
The resource ValueSet/amino-acid-3letter-ambiguous must have an OID assigned to cater for possible use with OID based terminology systems e.g. CDA usage (OIDs are easy to assign - see https://build.fhir.org/ig/FHIR/fhir-tools-ig/CodeSystem-ig-parameters.html#ig-parameters-auto-oid-root)
Profile reference 'http://hl7.org/fhir/StructureDefinition/shareablevalueset' has not been checked because it could not be found, and the validator is set to not fetch unknown profilesVALIDATION_VAL_PROFILE_UNKNOWN_NOT_POLICY
The resource ValueSet/amino-acid-3letter-unambiguous must have an OID assigned to cater for possible use with OID based terminology systems e.g. CDA usage (OIDs are easy to assign - see https://build.fhir.org/ig/FHIR/fhir-tools-ig/CodeSystem-ig-parameters.html#ig-parameters-auto-oid-root)
Profile reference 'http://hl7.org/fhir/StructureDefinition/shareablevalueset' has not been checked because it could not be found, and the validator is set to not fetch unknown profilesVALIDATION_VAL_PROFILE_UNKNOWN_NOT_POLICY
Profile reference 'http://hl7.org/fhir/StructureDefinition/shareablevalueset' has not been checked because it could not be found, and the validator is set to not fetch unknown profilesVALIDATION_VAL_PROFILE_UNKNOWN_NOT_POLICY
Profile reference 'http://hl7.org/fhir/StructureDefinition/shareablevalueset' has not been checked because it could not be found, and the validator is set to not fetch unknown profilesVALIDATION_VAL_PROFILE_UNKNOWN_NOT_POLICY
Profile reference 'http://hl7.org/fhir/StructureDefinition/shareablevalueset' has not been checked because it could not be found, and the validator is set to not fetch unknown profilesVALIDATION_VAL_PROFILE_UNKNOWN_NOT_POLICY
The value set references CodeSystem 'http://www.ncbi.nlm.nih.gov/taxonomy' which has status 'fragment'VALUESET_INCLUDE_CS_CONTENT
--
ValueSet.meta.profile[0] (l1/c2540)
warning
Profile reference 'http://hl7.org/fhir/StructureDefinition/shareablevalueset' has not been checked because it could not be found, and the validator is set to not fetch unknown profilesVALIDATION_VAL_PROFILE_UNKNOWN_NOT_POLICY
Profile reference 'http://hl7.org/fhir/StructureDefinition/shareablevalueset' has not been checked because it could not be found, and the validator is set to not fetch unknown profilesVALIDATION_VAL_PROFILE_UNKNOWN_NOT_POLICY
Error from https://tx.fhir.org/r5: Error: A definition for CodeSystem 'http://www.ncbi.nlm.nih.gov/refseq' could not be found, so the value set cannot be expanded
(from server, see log)
Profile reference 'http://hl7.org/fhir/StructureDefinition/shareablevalueset' has not been checked because it could not be found, and the validator is set to not fetch unknown profilesVALIDATION_VAL_PROFILE_UNKNOWN_NOT_POLICY
Profile reference 'http://hl7.org/fhir/StructureDefinition/shareablevalueset' has not been checked because it could not be found, and the validator is set to not fetch unknown profilesVALIDATION_VAL_PROFILE_UNKNOWN_NOT_POLICY
Profile reference 'http://hl7.org/fhir/StructureDefinition/shareablevalueset' has not been checked because it could not be found, and the validator is set to not fetch unknown profilesVALIDATION_VAL_PROFILE_UNKNOWN_NOT_POLICY
Profile reference 'http://hl7.org/fhir/StructureDefinition/shareablevalueset' has not been checked because it could not be found, and the validator is set to not fetch unknown profilesVALIDATION_VAL_PROFILE_UNKNOWN_NOT_POLICY
Profile reference 'http://hl7.org/fhir/StructureDefinition/shareablevalueset' has not been checked because it could not be found, and the validator is set to not fetch unknown profilesVALIDATION_VAL_PROFILE_UNKNOWN_NOT_POLICY
The resource ValueSet/nucleotide-dna-1letter-ambiguous must have an OID assigned to cater for possible use with OID based terminology systems e.g. CDA usage (OIDs are easy to assign - see https://build.fhir.org/ig/FHIR/fhir-tools-ig/CodeSystem-ig-parameters.html#ig-parameters-auto-oid-root)
Profile reference 'http://hl7.org/fhir/StructureDefinition/shareablevalueset' has not been checked because it could not be found, and the validator is set to not fetch unknown profilesVALIDATION_VAL_PROFILE_UNKNOWN_NOT_POLICY
The resource ValueSet/nucleotide-dna-1letter-unambiguous must have an OID assigned to cater for possible use with OID based terminology systems e.g. CDA usage (OIDs are easy to assign - see https://build.fhir.org/ig/FHIR/fhir-tools-ig/CodeSystem-ig-parameters.html#ig-parameters-auto-oid-root)
Profile reference 'http://hl7.org/fhir/StructureDefinition/shareablevalueset' has not been checked because it could not be found, and the validator is set to not fetch unknown profilesVALIDATION_VAL_PROFILE_UNKNOWN_NOT_POLICY
The resource ValueSet/nucleotide-dna-1letter-with-n must have an OID assigned to cater for possible use with OID based terminology systems e.g. CDA usage (OIDs are easy to assign - see https://build.fhir.org/ig/FHIR/fhir-tools-ig/CodeSystem-ig-parameters.html#ig-parameters-auto-oid-root)
Profile reference 'http://hl7.org/fhir/StructureDefinition/shareablevalueset' has not been checked because it could not be found, and the validator is set to not fetch unknown profilesVALIDATION_VAL_PROFILE_UNKNOWN_NOT_POLICY
The resource ValueSet/nucleotide-rna-1letter-unambiguous must have an OID assigned to cater for possible use with OID based terminology systems e.g. CDA usage (OIDs are easy to assign - see https://build.fhir.org/ig/FHIR/fhir-tools-ig/CodeSystem-ig-parameters.html#ig-parameters-auto-oid-root)
Most code systems defined in HL7 IGs will need to move to THO later during the process. Consider giving this code system a THO URL now (See https://confluence.hl7.org/display/TSMG/Terminology+Play+Book, and/or talk to TSMG)
Most code systems defined in HL7 IGs will need to move to THO later during the process. Consider giving this code system a THO URL now (See https://confluence.hl7.org/display/TSMG/Terminology+Play+Book, and/or talk to TSMG)
Most code systems defined in HL7 IGs will need to move to THO later during the process. Consider giving this code system a THO URL now (See https://confluence.hl7.org/display/TSMG/Terminology+Play+Book, and/or talk to TSMG)
Most code systems defined in HL7 IGs will need to move to THO later during the process. Consider giving this code system a THO URL now (See https://confluence.hl7.org/display/TSMG/Terminology+Play+Book, and/or talk to TSMG)
Most code systems defined in HL7 IGs will need to move to THO later during the process. Consider giving this code system a THO URL now (See https://confluence.hl7.org/display/TSMG/Terminology+Play+Book, and/or talk to TSMG)
Most code systems defined in HL7 IGs will need to move to THO later during the process. Consider giving this code system a THO URL now (See https://confluence.hl7.org/display/TSMG/Terminology+Play+Book, and/or talk to TSMG)
Most code systems defined in HL7 IGs will need to move to THO later during the process. Consider giving this code system a THO URL now (See https://confluence.hl7.org/display/TSMG/Terminology+Play+Book, and/or talk to TSMG)
Most code systems defined in HL7 IGs will need to move to THO later during the process. Consider giving this code system a THO URL now (See https://confluence.hl7.org/display/TSMG/Terminology+Play+Book, and/or talk to TSMG)
Most code systems defined in HL7 IGs will need to move to THO later during the process. Consider giving this code system a THO URL now (See https://confluence.hl7.org/display/TSMG/Terminology+Play+Book, and/or talk to TSMG)
Most code systems defined in HL7 IGs will need to move to THO later during the process. Consider giving this code system a THO URL now (See https://confluence.hl7.org/display/TSMG/Terminology+Play+Book, and/or talk to TSMG)
Most code systems defined in HL7 IGs will need to move to THO later during the process. Consider giving this code system a THO URL now (See https://confluence.hl7.org/display/TSMG/Terminology+Play+Book, and/or talk to TSMG)
Most code systems defined in HL7 IGs will need to move to THO later during the process. Consider giving this code system a THO URL now (See https://confluence.hl7.org/display/TSMG/Terminology+Play+Book, and/or talk to TSMG)
Most code systems defined in HL7 IGs will need to move to THO later during the process. Consider giving this code system a THO URL now (See https://confluence.hl7.org/display/TSMG/Terminology+Play+Book, and/or talk to TSMG)
Most code systems defined in HL7 IGs will need to move to THO later during the process. Consider giving this code system a THO URL now (See https://confluence.hl7.org/display/TSMG/Terminology+Play+Book, and/or talk to TSMG)
Most code systems defined in HL7 IGs will need to move to THO later during the process. Consider giving this code system a THO URL now (See https://confluence.hl7.org/display/TSMG/Terminology+Play+Book, and/or talk to TSMG)
Most code systems defined in HL7 IGs will need to move to THO later during the process. Consider giving this code system a THO URL now (See https://confluence.hl7.org/display/TSMG/Terminology+Play+Book, and/or talk to TSMG)
Most code systems defined in HL7 IGs will need to move to THO later during the process. Consider giving this code system a THO URL now (See https://confluence.hl7.org/display/TSMG/Terminology+Play+Book, and/or talk to TSMG)
None of the codings provided are in the value set 'Genomic Study Method Type VS' (http://hl7.org/fhir/uv/cg-incubator/ValueSet/genomicstudy-methodtype|0.1.0-ci-build), and a coding is recommended to come from this value set (codes = http://snomed.info/sct#117040002)
None of the codings provided are in the value set 'Genomic Study Change Type VS' (http://hl7.org/fhir/uv/cg-incubator/ValueSet/genomicstudy-changetype|0.1.0-ci-build), and a coding is recommended to come from this value set (codes = http://www.sequenceontology.org#SO:0001483)
None of the codings provided are in the value set 'Genomic Study Change Type VS' (http://hl7.org/fhir/uv/cg-incubator/ValueSet/genomicstudy-changetype|0.1.0-ci-build), and a coding is recommended to come from this value set (codes = http://www.sequenceontology.org#SO:0002007)
None of the codings provided are in the value set 'Genomic Study Change Type VS' (http://hl7.org/fhir/uv/cg-incubator/ValueSet/genomicstudy-changetype|0.1.0-ci-build), and a coding is recommended to come from this value set (codes = http://www.sequenceontology.org#SO:1000032)
None of the codings provided are in the value set 'Genomic Study Method Type VS' (http://hl7.org/fhir/uv/cg-incubator/ValueSet/genomicstudy-methodtype|0.1.0-ci-build), and a coding is recommended to come from this value set (codes = http://snomed.info/sct#117040002)
None of the codings provided are in the value set 'Genomic Study Change Type VS' (http://hl7.org/fhir/uv/cg-incubator/ValueSet/genomicstudy-changetype|0.1.0-ci-build), and a coding is recommended to come from this value set (codes = http://www.sequenceontology.org#SO:0001019)
None of the codings provided are in the value set 'Genomic Study Change Type VS' (http://hl7.org/fhir/uv/cg-incubator/ValueSet/genomicstudy-changetype|0.1.0-ci-build), and a coding is recommended to come from this value set (codes = http://www.sequenceontology.org#SO:0001483)
None of the codings provided are in the value set 'Genomic Study Change Type VS' (http://hl7.org/fhir/uv/cg-incubator/ValueSet/genomicstudy-changetype|0.1.0-ci-build), and a coding is recommended to come from this value set (codes = http://www.sequenceontology.org#SO:0001019)
None of the codings provided are in the value set 'Genomic Study Change Type VS' (http://hl7.org/fhir/uv/cg-incubator/ValueSet/genomicstudy-changetype|0.1.0-ci-build), and a coding is recommended to come from this value set (codes = http://www.sequenceontology.org#SO:0001483)
None of the codings provided are in the value set 'Genomic Study Change Type VS' (http://hl7.org/fhir/uv/cg-incubator/ValueSet/genomicstudy-changetype|0.1.0-ci-build), and a coding is recommended to come from this value set (codes = http://www.sequenceontology.org#SO:0002007)
None of the codings provided are in the value set 'Genomic Study Change Type VS' (http://hl7.org/fhir/uv/cg-incubator/ValueSet/genomicstudy-changetype|0.1.0-ci-build), and a coding is recommended to come from this value set (codes = http://www.sequenceontology.org#SO:1000032)
None of the codings provided are in the value set 'Genomic Study Change Type VS' (http://hl7.org/fhir/uv/cg-incubator/ValueSet/genomicstudy-changetype|0.1.0-ci-build), and a coding is recommended to come from this value set (codes = http://www.sequenceontology.org#SO:0001019)
None of the codings provided are in the value set 'Genomic Study Change Type VS' (http://hl7.org/fhir/uv/cg-incubator/ValueSet/genomicstudy-changetype|0.1.0-ci-build), and a coding is recommended to come from this value set (codes = http://www.sequenceontology.org#SO:0001565)
None of the codings provided are in the value set 'Genomic Study Change Type VS' (http://hl7.org/fhir/uv/cg-incubator/ValueSet/genomicstudy-changetype|0.1.0-ci-build), and a coding is recommended to come from this value set (codes = http://www.sequenceontology.org#SO:0001576)
Profile reference 'http://hl7.org/fhir/StructureDefinition/shareablecodesystem' has not been checked because it could not be found, and the validator is set to not fetch unknown profiles
Profile reference 'http://hl7.org/fhir/StructureDefinition/shareablecodesystem' has not been checked because it could not be found, and the validator is set to not fetch unknown profiles
Profile reference 'http://hl7.org/fhir/StructureDefinition/shareablecodesystem' has not been checked because it could not be found, and the validator is set to not fetch unknown profiles
Profile reference 'http://hl7.org/fhir/StructureDefinition/shareablecodesystem' has not been checked because it could not be found, and the validator is set to not fetch unknown profiles
Profile reference 'http://hl7.org/fhir/StructureDefinition/shareablecodesystem' has not been checked because it could not be found, and the validator is set to not fetch unknown profiles
Profile reference 'http://hl7.org/fhir/StructureDefinition/shareablecodesystem' has not been checked because it could not be found, and the validator is set to not fetch unknown profiles
Profile reference 'http://hl7.org/fhir/StructureDefinition/shareablevalueset' has not been checked because it could not be found, and the validator is set to not fetch unknown profiles
Profile reference 'http://hl7.org/fhir/StructureDefinition/shareablevalueset' has not been checked because it could not be found, and the validator is set to not fetch unknown profiles
Profile reference 'http://hl7.org/fhir/StructureDefinition/shareablevalueset' has not been checked because it could not be found, and the validator is set to not fetch unknown profiles
Profile reference 'http://hl7.org/fhir/StructureDefinition/shareablevalueset' has not been checked because it could not be found, and the validator is set to not fetch unknown profiles
Profile reference 'http://hl7.org/fhir/StructureDefinition/shareablevalueset' has not been checked because it could not be found, and the validator is set to not fetch unknown profiles
Profile reference 'http://hl7.org/fhir/StructureDefinition/shareablevalueset' has not been checked because it could not be found, and the validator is set to not fetch unknown profiles
Profile reference 'http://hl7.org/fhir/StructureDefinition/shareablecodesystem' has not been checked because it could not be found, and the validator is set to not fetch unknown profiles
Profile reference 'http://hl7.org/fhir/StructureDefinition/shareablecodesystem' has not been checked because it could not be found, and the validator is set to not fetch unknown profiles
Profile reference 'http://hl7.org/fhir/StructureDefinition/shareablecodesystem' has not been checked because it could not be found, and the validator is set to not fetch unknown profiles
Profile reference 'http://hl7.org/fhir/StructureDefinition/shareablecodesystem' has not been checked because it could not be found, and the validator is set to not fetch unknown profiles
Profile reference 'http://hl7.org/fhir/StructureDefinition/shareablecodesystem' has not been checked because it could not be found, and the validator is set to not fetch unknown profiles
Profile reference 'http://hl7.org/fhir/StructureDefinition/shareablecodesystem' has not been checked because it could not be found, and the validator is set to not fetch unknown profiles
Profile reference 'http://hl7.org/fhir/StructureDefinition/shareablecodesystem' has not been checked because it could not be found, and the validator is set to not fetch unknown profiles
Profile reference 'http://hl7.org/fhir/StructureDefinition/shareablecodesystem' has not been checked because it could not be found, and the validator is set to not fetch unknown profiles
Profile reference 'http://hl7.org/fhir/StructureDefinition/shareablecodesystem' has not been checked because it could not be found, and the validator is set to not fetch unknown profiles
Profile reference 'http://hl7.org/fhir/StructureDefinition/shareablecodesystem' has not been checked because it could not be found, and the validator is set to not fetch unknown profiles
Profile reference 'http://hl7.org/fhir/StructureDefinition/shareablecodesystem' has not been checked because it could not be found, and the validator is set to not fetch unknown profiles
Profile reference 'http://hl7.org/fhir/StructureDefinition/shareablevalueset' has not been checked because it could not be found, and the validator is set to not fetch unknown profiles
Profile reference 'http://hl7.org/fhir/StructureDefinition/shareablevalueset' has not been checked because it could not be found, and the validator is set to not fetch unknown profiles
Profile reference 'http://hl7.org/fhir/StructureDefinition/shareablevalueset' has not been checked because it could not be found, and the validator is set to not fetch unknown profiles
Profile reference 'http://hl7.org/fhir/StructureDefinition/shareablevalueset' has not been checked because it could not be found, and the validator is set to not fetch unknown profiles
Profile reference 'http://hl7.org/fhir/StructureDefinition/shareablevalueset' has not been checked because it could not be found, and the validator is set to not fetch unknown profiles
Profile reference 'http://hl7.org/fhir/StructureDefinition/shareablevalueset' has not been checked because it could not be found, and the validator is set to not fetch unknown profiles
Profile reference 'http://hl7.org/fhir/StructureDefinition/shareablevalueset' has not been checked because it could not be found, and the validator is set to not fetch unknown profiles
Profile reference 'http://hl7.org/fhir/StructureDefinition/shareablevalueset' has not been checked because it could not be found, and the validator is set to not fetch unknown profiles
Profile reference 'http://hl7.org/fhir/StructureDefinition/shareablevalueset' has not been checked because it could not be found, and the validator is set to not fetch unknown profiles
Profile reference 'http://hl7.org/fhir/StructureDefinition/shareablevalueset' has not been checked because it could not be found, and the validator is set to not fetch unknown profiles
Profile reference 'http://hl7.org/fhir/StructureDefinition/shareablevalueset' has not been checked because it could not be found, and the validator is set to not fetch unknown profiles
Profile reference 'http://hl7.org/fhir/StructureDefinition/shareablevalueset' has not been checked because it could not be found, and the validator is set to not fetch unknown profiles
Profile reference 'http://hl7.org/fhir/StructureDefinition/shareablevalueset' has not been checked because it could not be found, and the validator is set to not fetch unknown profiles
Profile reference 'http://hl7.org/fhir/StructureDefinition/shareablevalueset' has not been checked because it could not be found, and the validator is set to not fetch unknown profiles
Profile reference 'http://hl7.org/fhir/StructureDefinition/shareablevalueset' has not been checked because it could not be found, and the validator is set to not fetch unknown profiles
Profile reference 'http://hl7.org/fhir/StructureDefinition/shareablevalueset' has not been checked because it could not be found, and the validator is set to not fetch unknown profiles
Profile reference 'http://hl7.org/fhir/StructureDefinition/shareablevalueset' has not been checked because it could not be found, and the validator is set to not fetch unknown profiles
Profile reference 'http://hl7.org/fhir/StructureDefinition/shareablevalueset' has not been checked because it could not be found, and the validator is set to not fetch unknown profiles
hl7.fhir.uv.cg-incubator
hl7.terminology.r5
