Clinical Genomics Resource Incubator
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Clinical Genomics Resource Incubator, published by HL7 International / Clinical Genomics. This guide is not an authorized publication; it is the continuous build for version 0.1.0-ci-build built by the FHIR (HL7® FHIR® Standard) CI Build. This version is based on the current content of https://github.com/HL7/cg-incubator/ and changes regularly. See the Directory of published versions

: Molecular Definition Allele 7

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@prefix fhir: <http://hl7.org/fhir/> .
@prefix owl: <http://www.w3.org/2002/07/owl#> .
@prefix rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#> .
@prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> .
@prefix xsd: <http://www.w3.org/2001/XMLSchema#> .

# - resource -------------------------------------------------------------------

<http://hl7.org/fhir/MolecularDefinition/example-allele7> a fhir:MolecularDefinition ;
  fhir:resourceDefinition http://hl7.org/fhir/StructureDefinition/MolecularDefinition|0.1.0-ci-build ;
  fhir:nodeRole fhir:treeRoot ;
  fhir:id [ fhir:v "example-allele7"] ; # 
  fhir:text [
     fhir:status [ fhir:v "generated" ] ;
     fhir:div [ fhir:v "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p class=\"res-header-id\"><b>Generated Narrative: MolecularDefinition example-allele7</b></p><a name=\"example-allele7\"> </a><a name=\"hcexample-allele7\"> </a><p><b>moleculeType</b>: <span title=\"Codes:{http://hl7.org/fhir/uv/cg-incubator/CodeSystem/moleculardefinition-moleculetype dna}\">DNA sequence</span></p><blockquote><p><b>location</b></p><h3>SequenceLocations</h3><table class=\"grid\"><tr><td style=\"display: none\">-</td><td><b>SequenceContext</b></td></tr><tr><td style=\"display: none\">*</td><td><a href=\"MolecularDefinition-example-sequence-hla000011.html\">Starting Sequence Resource: HLA00001</a></td></tr></table></blockquote><blockquote><p><b>representation</b></p><blockquote><p><b>relative</b></p><p><b>startingMolecule</b>: <a href=\"MolecularDefinition-example-sequence-hla000011.html\">Starting Sequence Resource: HLA00001</a></p><blockquote><p><b>edit</b></p><blockquote><p><b>coordinateInterval</b></p><h3>CoordinateSystems</h3><table class=\"grid\"><tr><td style=\"display: none\">-</td><td><b>System</b></td></tr><tr><td style=\"display: none\">*</td><td><span title=\"Codes:{http://loinc.org LA30100-4}\">0-based interval counting</span></td></tr></table><p><b>start</b>: 143</p><p><b>end</b>: 144</p></blockquote><p><b>replacementMolecule</b>: <a href=\"MolecularDefinition-example-sequence-a.html\">Replacement Sequence Resource: A</a></p><p><b>replacedMolecule</b>: <a href=\"MolecularDefinition-example-sequence-c.html\">Replaced Sequence Resource: C</a></p></blockquote></blockquote></blockquote></div>"^^rdf:XMLLiteral ]
  ] ; # 
  fhir:moleculeType [
     fhir:coding ( [
       fhir:system [
         fhir:v "http://hl7.org/fhir/uv/cg-incubator/CodeSystem/moleculardefinition-moleculetype"^^xsd:anyURI ;
         fhir:l <http://hl7.org/fhir/uv/cg-incubator/CodeSystem/moleculardefinition-moleculetype>
       ] ;
       fhir:code [ fhir:v "dna" ] ;
       fhir:display [ fhir:v "DNA sequence" ]
     ] )
  ] ; # 
  fhir:location ( [
     fhir:sequenceLocation [
       fhir:sequenceContext [
         fhir:l <http://hl7.org/fhir/MolecularDefinition/example-sequence-hla000011> ;
         fhir:reference [ fhir:v "MolecularDefinition/example-sequence-hla000011" ] ;
         fhir:type [
           fhir:v "MolecularDefinition"^^xsd:anyURI ;
           fhir:l fhir:MolecularDefinition
         ] ;
         fhir:display [ fhir:v "Starting Sequence Resource: HLA00001" ]
       ]
     ]
  ] ) ; # 
  fhir:representation ( [
     fhir:relative [
       fhir:startingMolecule [
         fhir:l <http://hl7.org/fhir/MolecularDefinition/example-sequence-hla000011> ;
         fhir:reference [ fhir:v "MolecularDefinition/example-sequence-hla000011" ] ;
         fhir:type [
           fhir:v "MolecularDefinition"^^xsd:anyURI ;
           fhir:l fhir:MolecularDefinition
         ] ;
         fhir:display [ fhir:v "Starting Sequence Resource: HLA00001" ]
       ] ;
       fhir:edit ( [
         fhir:coordinateInterval [
           fhir:coordinateSystem [
             fhir:system [
               fhir:coding ( [
                 fhir:system [
                   fhir:v "http://loinc.org"^^xsd:anyURI ;
                   fhir:l <http://loinc.org>
                 ] ;
                 fhir:code [ fhir:v "LA30100-4" ] ;
                 fhir:display [ fhir:v "0-based interval counting" ]
               ] ) ;
               fhir:text [ fhir:v "0-based interval counting" ]
             ]
           ] ;
           fhir:start [
             a fhir:Quantity ;
             fhir:value [ fhir:v "143"^^xsd:decimal ]
           ] ;
           fhir:end [
             a fhir:Quantity ;
             fhir:value [ fhir:v "144"^^xsd:decimal ]
           ]
         ] ;
         fhir:replacementMolecule [
           fhir:l <http://hl7.org/fhir/MolecularDefinition/example-sequence-a> ;
           fhir:reference [ fhir:v "MolecularDefinition/example-sequence-a" ] ;
           fhir:type [
             fhir:v "MolecularDefinition"^^xsd:anyURI ;
             fhir:l fhir:MolecularDefinition
           ] ;
           fhir:display [ fhir:v "Replacement Sequence Resource: A" ]
         ] ;
         fhir:replacedMolecule [
           fhir:l <http://hl7.org/fhir/MolecularDefinition/example-sequence-c> ;
           fhir:reference [ fhir:v "MolecularDefinition/example-sequence-c" ] ;
           fhir:type [
             fhir:v "MolecularDefinition"^^xsd:anyURI ;
             fhir:l fhir:MolecularDefinition
           ] ;
           fhir:display [ fhir:v "Replaced Sequence Resource: C" ]
         ]
       ] )
     ]
  ] ) . # 

<http://hl7.org/fhir/MolecularDefinition/example-sequence-hla000011> a fhir:MolecularDefinition .

<http://hl7.org/fhir/MolecularDefinition/example-sequence-a> a fhir:MolecularDefinition .

<http://hl7.org/fhir/MolecularDefinition/example-sequence-c> a fhir:MolecularDefinition .