Clinical Genomics Resource Incubator
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Clinical Genomics Resource Incubator, published by HL7 International / Clinical Genomics. This guide is not an authorized publication; it is the continuous build for version 0.1.0-ci-build built by the FHIR (HL7® FHIR® Standard) CI Build. This version is based on the current content of https://github.com/HL7/cg-incubator/ and changes regularly. See the Directory of published versions

: Tumor Specimen

Page standards status: Informative

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<Specimen xmlns="http://hl7.org/fhir">
  <id value="tumorSpecimen"/>
  <language value="en"/>
  <text>
    <status value="generated"/>
    <div xmlns="http://www.w3.org/1999/xhtml" xml:lang="en" lang="en"><p class="res-header-id"><b>Generated Narrative: Specimen tumorSpecimen</b></p><a name="tumorSpecimen"> </a><a name="hctumorSpecimen"> </a><div style="display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%"><p style="margin-bottom: 0px">Language: en</p></div><p><b>identifier</b>: <code>http://example.org/identifiers/specimens</code>/222333</p><p><b>status</b>: Available</p><p><b>type</b>: <span title="Codes:{http://snomed.info/sct 122610009}">Specimen from lung obtained by biopsy (specimen)</span></p><p><b>subject</b>: <a href="Patient-somaticPatient.html">Junior Hamsburg (official) Male, DoB: 1987-09-01 ( Medical record number: 1234567 (use: temp, period: 2021-01-01 --&gt; (ongoing)))</a></p><p><b>receivedTime</b>: 2023-01-23 01:01:01+0000</p><h3>Collections</h3><table class="grid"><tr><td style="display: none">-</td><td><b>Collected[x]</b></td><td><b>Method</b></td></tr><tr><td style="display: none">*</td><td>2023-01-20 09:00:00+0000</td><td><span title="Codes:{http://snomed.info/sct 129314006}">Biopsy - action</span></td></tr></table><p><b>note</b>: </p><blockquote><div><p>FFPE tumor tissue. Tumor cellularity: 20%.</p>
</div></blockquote></div>
  </text>
  <identifier>
    <system value="http://example.org/identifiers/specimens"/>
    <value value="222333"/>
  </identifier>
  <status value="available"/>
  <type>
    <coding>
      <system value="http://snomed.info/sct"/>
      <code value="122610009"/>
      <display value="Specimen from lung obtained by biopsy (specimen)"/>
    </coding>
  </type>
  <subject>🔗 
    <reference value="Patient/somaticPatient"/>
  </subject>
  <receivedTime value="2023-01-23T01:01:01Z"/>
  <collection>
    <collectedDateTime value="2023-01-20T09:00:00Z"/>
    <method>
      <coding>
        <system value="http://snomed.info/sct"/>
        <code value="129314006"/>
        <display value="Biopsy - action"/>
      </coding>
    </method>
  </collection>
  <note>
    <text value="FFPE tumor tissue. Tumor cellularity: 20%."/>
  </note>
</Specimen>