<?xml version="1.0" encoding="UTF-8"?>

<MolecularDefinition xmlns="http://hl7.org/fhir" resourceDefinition="http://hl7.org/fhir/StructureDefinition/MolecularDefinition|0.1.0-ci-build">
  <id value="example-variation-pgx-var-1019"/>
  <language value="en"/>
  <text>
    <status value="generated"/><div xmlns="http://www.w3.org/1999/xhtml" xml:lang="en" lang="en"><p class="res-header-id"><b>Generated Narrative: MolecularDefinition example-variation-pgx-var-1019</b></p><a name="example-variation-pgx-var-1019"> </a><a name="hcexample-variation-pgx-var-1019"> </a><div style="display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%"><p style="margin-bottom: 0px">Language: en</p></div><p><b>moleculeType</b>: <span title="Codes:{http://hl7.org/fhir/uv/cg-incubator/CodeSystem/moleculardefinition-moleculetype dna}">DNA sequence</span></p><blockquote><p><b>location</b></p><blockquote><p><b>sequenceLocation</b></p><p><b>sequenceContext</b>: <a href="MolecularDefinition-example-sequence-nc00001010-url.html">Starting Sequence Resource: Homo sapiens chromosome 10, GRCh37.p13 Primary Assembly, NC_000010.10</a></p><blockquote><p><b>coordinateInterval</b></p><h3>CoordinateSystems</h3><table class="grid"><tr><td style="display: none">-</td><td><b>System</b></td></tr><tr><td style="display: none">*</td><td><span title="Codes:{http://loinc.org LA30102-0}">1-based character counting</span></td></tr></table><p><b>start</b>: 31096368</p><p><b>end</b>: 31096368</p></blockquote></blockquote></blockquote><blockquote><p><b>representation</b></p><p><b>focus</b>: Reference State</p><h3>Literals</h3><table class="grid"><tr><td style="display: none">-</td><td><b>Value</b></td></tr><tr><td style="display: none">*</td><td>G</td></tr></table></blockquote><blockquote><p><b>representation</b></p><p><b>focus</b>: Alternative State</p><p><b>code</b>: <span title="Codes:{http://varnomen.hgvs.org NC_000010.10:g.31096368G&gt;T}">NC_000010.10:g.31096368G&gt;T</span></p><h3>Literals</h3><table class="grid"><tr><td style="display: none">-</td><td><b>Value</b></td></tr><tr><td style="display: none">*</td><td>T</td></tr></table></blockquote></div>
  </text>
  <moleculeType>
    <coding>
      <system value="http://hl7.org/fhir/uv/cg-incubator/CodeSystem/moleculardefinition-moleculetype"/>
      <code value="dna"/>
      <display value="DNA sequence"/>
    </coding>
  </moleculeType>
  <location>
    <sequenceLocation>
      <sequenceContext>
        <reference value="MolecularDefinition/example-sequence-nc00001010-url"/>
        <type value="MolecularDefinition"/>
        <display value="Starting Sequence Resource: Homo sapiens chromosome 10, GRCh37.p13 Primary Assembly, NC_000010.10"/>
      </sequenceContext>
      <coordinateInterval>
        <coordinateSystem>
          <system>
            <coding>
              <system value="http://loinc.org"/>
              <code value="LA30102-0"/>
              <display value="1-based character counting"/>
            </coding>
            <text value="1-based character counting"/>
          </system>
        </coordinateSystem>
        <startQuantity>
          <value value="31096368"/>
        </startQuantity>
        <endQuantity>
          <value value="31096368"/>
        </endQuantity>
      </coordinateInterval>
    </sequenceLocation>
  </location>
  <representation>
    <focus value="reference-state"/>
    <literal>
      <value value="G"/>
    </literal>
  </representation>
  <representation>
    <focus value="alternative-state"/>
    <code>
      <coding>
        <system value="http://varnomen.hgvs.org"/>
        <code value="NC_000010.10:g.31096368G&gt;T"/>
        <display value="NC_000010.10:g.31096368G&gt;T"/>
      </coding>
    </code>
    <literal>
      <value value="T"/>
    </literal>
  </representation>
</MolecularDefinition>