Clinical Genomics Resource Incubator
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Clinical Genomics Resource Incubator, published by HL7 International / Clinical Genomics. This guide is not an authorized publication; it is the continuous build for version 0.1.0-ci-build built by the FHIR (HL7® FHIR® Standard) CI Build. This version is based on the current content of https://github.com/HL7/cg-incubator/ and changes regularly. See the Directory of published versions

: Molecular Definition Haplotype 2

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@prefix fhir: <http://hl7.org/fhir/> .
@prefix owl: <http://www.w3.org/2002/07/owl#> .
@prefix rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#> .
@prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> .
@prefix xsd: <http://www.w3.org/2001/XMLSchema#> .

# - resource -------------------------------------------------------------------

 a fhir:MolecularDefinition ;
  fhir:resourceDefinition http://hl7.org/fhir/StructureDefinition/MolecularDefinition|0.1.0-ci-build ;
  fhir:nodeRole fhir:treeRoot ;
  fhir:id [ fhir:v "example-haplotype2"] ; # 
  fhir:language [ fhir:v "en"] ; # 
  fhir:text [
fhir:status [ fhir:v "generated" ] ;
fhir:div [ fhir:v "<div xmlns=\"http://www.w3.org/1999/xhtml\" xml:lang=\"en\" lang=\"en\"><p class=\"res-header-id\"><b>Generated Narrative: MolecularDefinition example-haplotype2</b></p><a name=\"example-haplotype2\"> </a><a name=\"hcexample-haplotype2\"> </a><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Language: en</p></div><p><b>description</b>: </p><div><p>HLA-A*01:02:01:01 and HLA00002</p>\n</div><p><b>moleculeType</b>: <span title=\"Codes:{http://hl7.org/fhir/uv/cg-incubator/CodeSystem/moleculardefinition-moleculetype dna}\">DNA sequence</span></p><p><b>member</b>: </p><ul><li><a href=\"MolecularDefinition-example-allele3.html\">First Allele, HLA00001.1:c.98T&gt;C</a></li><li><a href=\"MolecularDefinition-example-allele4.html\">Second Allele, HLA00001.1:c.121C&gt;A</a></li><li><a href=\"MolecularDefinition-example-allele5.html\">Third Allele, HLA00001.1:c.123C&gt;T</a></li><li><a href=\"MolecularDefinition-example-allele6.html\">Fourth Allele, HLA00001.1:c.126G&gt;A</a></li><li><a href=\"MolecularDefinition-example-allele7.html\">Fifth Allele, HLA00001.1:c.144C&gt;A</a></li></ul><blockquote><p><b>location</b></p><h3>SequenceLocations</h3><table class=\"grid\"><tr><td style=\"display: none\">-</td><td><b>SequenceContext</b></td></tr><tr><td style=\"display: none\">*</td><td><a href=\"MolecularDefinition-example-sequence-hla000011.html\">Starting Sequence Resource: HLA00001 (A*01:01:01:01)</a></td></tr></table></blockquote></div>"^^rdf:XMLLiteral ]
  ] ; # 
  fhir:description [ fhir:v "HLA-A*01:02:01:01 and HLA00002"] ; # 
  fhir:moleculeType [
    ( fhir:coding [
fhir:system [
fhir:v "http://hl7.org/fhir/uv/cg-incubator/CodeSystem/moleculardefinition-moleculetype"^^xsd:anyURI ;
fhir:l <http://hl7.org/fhir/uv/cg-incubator/CodeSystem/moleculardefinition-moleculetype>       ] ;
fhir:code [ fhir:v "dna" ] ;
fhir:display [ fhir:v "DNA sequence" ]     ] )
  ] ; # 
  fhir:member ( [
fhir:l fhir:MolecularDefinition/example-allele3 ;
fhir:reference [ fhir:v "MolecularDefinition/example-allele3" ] ;
fhir:type [
fhir:v "MolecularDefinition"^^xsd:anyURI ;
fhir:l fhir:MolecularDefinition     ] ;
fhir:display [ fhir:v "First Allele, HLA00001.1:c.98T>C" ]
  ] [
fhir:l fhir:MolecularDefinition/example-allele4 ;
fhir:reference [ fhir:v "MolecularDefinition/example-allele4" ] ;
fhir:type [
fhir:v "MolecularDefinition"^^xsd:anyURI ;
fhir:l fhir:MolecularDefinition     ] ;
fhir:display [ fhir:v "Second Allele, HLA00001.1:c.121C>A" ]
  ] [
fhir:l fhir:MolecularDefinition/example-allele5 ;
fhir:reference [ fhir:v "MolecularDefinition/example-allele5" ] ;
fhir:type [
fhir:v "MolecularDefinition"^^xsd:anyURI ;
fhir:l fhir:MolecularDefinition     ] ;
fhir:display [ fhir:v "Third Allele, HLA00001.1:c.123C>T" ]
  ] [
fhir:l fhir:MolecularDefinition/example-allele6 ;
fhir:reference [ fhir:v "MolecularDefinition/example-allele6" ] ;
fhir:type [
fhir:v "MolecularDefinition"^^xsd:anyURI ;
fhir:l fhir:MolecularDefinition     ] ;
fhir:display [ fhir:v "Fourth Allele, HLA00001.1:c.126G>A" ]
  ] [
fhir:l fhir:MolecularDefinition/example-allele7 ;
fhir:reference [ fhir:v "MolecularDefinition/example-allele7" ] ;
fhir:type [
fhir:v "MolecularDefinition"^^xsd:anyURI ;
fhir:l fhir:MolecularDefinition     ] ;
fhir:display [ fhir:v "Fifth Allele, HLA00001.1:c.144C>A" ]
  ] ) ; # 
  fhir:location ( [
fhir:sequenceLocation [
fhir:sequenceContext [
fhir:l fhir:MolecularDefinition/example-sequence-hla000011 ;
fhir:reference [ fhir:v "MolecularDefinition/example-sequence-hla000011" ] ;
fhir:type [
fhir:v "MolecularDefinition"^^xsd:anyURI ;
fhir:l fhir:MolecularDefinition         ] ;
fhir:display [ fhir:v "Starting Sequence Resource: HLA00001 (A*01:01:01:01)" ]       ]     ]
  ] ) . #