Clinical Genomics Resource Incubator
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Clinical Genomics Resource Incubator, published by HL7 International / Clinical Genomics. This guide is not an authorized publication; it is the continuous build for version 0.1.0-ci-build built by the FHIR (HL7® FHIR® Standard) CI Build. This version is based on the current content of https://github.com/HL7/cg-incubator/ and changes regularly. See the Directory of published versions

: Molecular Definition Haplotype 1

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<MolecularDefinition xmlns="http://hl7.org/fhir">
  <id value="example-haplotype1"/>
  <language value="en"/>
  <text>
    <status value="generated"/>
    <div xmlns="http://www.w3.org/1999/xhtml" xml:lang="en" lang="en"><p class="res-header-id"><b>Generated Narrative: MolecularDefinition example-haplotype1</b></p><a name="example-haplotype1"> </a><a name="hcexample-haplotype1"> </a><div style="display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%"><p style="margin-bottom: 0px">Language: en</p></div><p><b>description</b>: </p><div><p>CYP2C19<em>1B and CYP2C19</em>1.002</p>
</div><p><b>moleculeType</b>: <span title="Codes:{http://hl7.org/fhir/uv/cg-incubator/CodeSystem/moleculardefinition-moleculetype dna}">DNA sequence</span></p><p><b>member</b>: </p><ul><li><a href="MolecularDefinition-example-allele1.html">First Allele, NG_008384.3:g.5124C&gt;T</a></li><li><a href="MolecularDefinition-example-allele2.html">Second Allele, NG_008384.3:g.85186A&gt;G</a></li></ul><blockquote><p><b>location</b></p><blockquote><p><b>sequenceLocation</b></p><p><b>sequenceContext</b>: <a href="MolecularDefinition-example-sequence-lrg584.html">Starting Sequence Resource: LRG_584</a></p><blockquote><p><b>coordinateInterval</b></p><h3>CoordinateSystems</h3><table class="grid"><tr><td style="display: none">-</td><td><b>System</b></td></tr><tr><td style="display: none">*</td><td><span title="Codes:{http://loinc.org LA30100-4}">0-based interval counting</span></td></tr></table><p><b>start</b>: 5001</p><p><b>end</b>: 97867</p></blockquote></blockquote></blockquote></div>
  </text>
  <description value="CYP2C19*1B and CYP2C19*1.002"/>
  <moleculeType>
    <coding>
      <system
              value="http://hl7.org/fhir/uv/cg-incubator/CodeSystem/moleculardefinition-moleculetype"/>
      <code value="dna"/>
      <display value="DNA sequence"/>
    </coding>
  </moleculeType>
  <member>🔗 
    <reference value="MolecularDefinition/example-allele1"/>
    <type value="MolecularDefinition"/>
    <display value="First Allele, NG_008384.3:g.5124C&gt;T"/>
  </member>
  <member>🔗 
    <reference value="MolecularDefinition/example-allele2"/>
    <type value="MolecularDefinition"/>
    <display value="Second Allele, NG_008384.3:g.85186A&gt;G"/>
  </member>
  <location>
    <sequenceLocation>
      <sequenceContext>🔗 
        <reference value="MolecularDefinition/example-sequence-lrg584"/>
        <type value="MolecularDefinition"/>
        <display value="Starting Sequence Resource: LRG_584"/>
      </sequenceContext>
      <coordinateInterval>
        <coordinateSystem>
          <system>
            <coding>
              <system value="http://loinc.org"/>
              <code value="LA30100-4"/>
              <display value="0-based interval counting"/>
            </coding>
            <text value="0-based interval counting"/>
          </system>
        </coordinateSystem>
        <startQuantity>
          <value value="5001"/>
        </startQuantity>
        <endQuantity>
          <value value="97867"/>
        </endQuantity>
      </coordinateInterval>
    </sequenceLocation>
  </location>
</MolecularDefinition>