Clinical Genomics Resource Incubator
0.1.0-ci-build - CI Build
Clinical Genomics Resource Incubator
0.1.0-ci-build - CI Build
Clinical Genomics Resource Incubator, published by HL7 International / Clinical Genomics. This guide is not an authorized publication; it is the continuous build for version 0.1.0-ci-build built by the FHIR (HL7® FHIR® Standard) CI Build. This version is based on the current content of https://github.com/HL7/cg-incubator/ and changes regularly. See the Directory of published versions
| Page standards status: Informative |
{
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"div" : "<div xmlns=\"http://www.w3.org/1999/xhtml\" xml:lang=\"en\" lang=\"en\"><p class=\"res-header-id\"><b>Generated Narrative: List GenomicStudy-examples</b></p><a name=\"GenomicStudy-examples\"> </a><a name=\"hcGenomicStudy-examples\"> </a><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Language: en</p></div><table class=\"clstu\"><tr><td>Mode: Working List </td><td>Status: Current </td></tr><tr><td/></tr></table><table class=\"grid\"><tr style=\"backgound-color: #eeeeee\"><td><b>Items</b></td></tr><tr><td><a href=\"GenomicStudy-example.html\">General</a></td></tr><tr><td><a href=\"GenomicStudy-example-trio2.html\">General</a></td></tr><tr><td><a href=\"GenomicStudy-example-lungMass.html\">General</a></td></tr><tr><td><a href=\"GenomicStudy-example-pgx.html\">General</a></td></tr><tr><td><a href=\"GenomicStudy-example-somaticStudy.html\">General</a></td></tr><tr><td><a href=\"DocumentReference-CNVAnalysis-called.html\">General</a></td></tr><tr><td><a href=\"DocumentReference-genomicBEDfile.html\">General</a></td></tr><tr><td><a href=\"DocumentReference-genomicFile1.html\">General</a></td></tr><tr><td><a href=\"DocumentReference-genomicFile2.html\">General</a></td></tr><tr><td><a href=\"DocumentReference-genomicFile3.html\">General</a></td></tr><tr><td><a href=\"DocumentReference-genomicFile4.html\">General</a></td></tr><tr><td><a href=\"DocumentReference-genomicVCFfile-cnv.html\">General</a></td></tr><tr><td><a href=\"DocumentReference-genomicVCFfile-simple.html\">General</a></td></tr><tr><td><a href=\"DocumentReference-genomicVCFfile.html\">General</a></td></tr><tr><td><a href=\"DocumentReference-SimpleVariantAnalysis-called.html\">General</a></td></tr><tr><td><a href=\"DocumentReference-WES-FullSequencedRegion-GRCh38.html\">General</a></td></tr><tr><td><a href=\"DocumentReference-genomicFileProband.html\">General</a></td></tr><tr><td><a href=\"DocumentReference-genomicFileMother.html\">General</a></td></tr><tr><td><a href=\"DocumentReference-genomicFileFather.html\">General</a></td></tr><tr><td><a href=\"DocumentReference-genomicFileGroupAsSubject.html\">General</a></td></tr><tr><td><a href=\"Device-NGS-device.html\">General</a></td></tr><tr><td><a href=\"Device-Triodenovo-SW.html\">General</a></td></tr><tr><td><a href=\"Encounter-denovoEncounter.html\">General</a></td></tr><tr><td><a href=\"Encounter-genomicEncounter.html\">General</a></td></tr><tr><td><a href=\"Group-groupDenovoFamily.html\">General</a></td></tr><tr><td><a href=\"Patient-denovoChild.html\">General</a></td></tr><tr><td><a href=\"Patient-denovoFather.html\">General</a></td></tr><tr><td><a href=\"Patient-denovoMother.html\">General</a></td></tr><tr><td><a href=\"Patient-genomicPatient.html\">General</a></td></tr><tr><td><a href=\"Practitioner-practitioner01.html\">General</a></td></tr><tr><td><a href=\"Practitioner-practitioner02.html\">General</a></td></tr><tr><td><a href=\"RelatedPerson-relatedPersonDenovoMother.html\">General</a></td></tr><tr><td><a href=\"RelatedPerson-relatedPersonDenovoFather.html\">General</a></td></tr><tr><td><a href=\"ServiceRequest-genomicServiceRequest.html\">General</a></td></tr><tr><td><a href=\"ServiceRequest-genomicServiceRequest2.html\">General</a></td></tr><tr><td><a href=\"ServiceRequest-genomicServiceRequest3.html\">General</a></td></tr><tr><td><a href=\"ServiceRequest-genomicServiceRequest4.html\">General</a></td></tr><tr><td><a href=\"ServiceRequest-genomicSRProband.html\">General</a></td></tr><tr><td><a href=\"ServiceRequest-genomicSRMother.html\">General</a></td></tr><tr><td><a href=\"ServiceRequest-genomicSRFather.html\">General</a></td></tr><tr><td><a href=\"Specimen-denovo-1.html\">General</a></td></tr><tr><td><a href=\"Specimen-denovo-2.html\">General</a></td></tr><tr><td><a href=\"Specimen-denovo-3.html\">General</a></td></tr><tr><td><a href=\"Specimen-specimenProband.html\">General</a></td></tr><tr><td><a href=\"Specimen-specimenMother.html\">General</a></td></tr><tr><td><a href=\"Specimen-specimenFather.html\">General</a></td></tr><tr><td><a href=\"Specimen-genomicSpecimen.html\">General</a></td></tr><tr><td><a href=\"Patient-pgxPatient.html\">General</a></td></tr><tr><td><a href=\"Specimen-pgxSpecimen.html\">General</a></td></tr><tr><td><a href=\"ServiceRequest-pgxServiceRequest.html\">General</a></td></tr><tr><td><a href=\"DocumentReference-pgxVCFfile.html\">General</a></td></tr><tr><td><a href=\"Patient-somaticPatient.html\">General</a></td></tr><tr><td><a href=\"Specimen-tumorSpecimen.html\">General</a></td></tr><tr><td><a href=\"Specimen-normalSpecimen.html\">General</a></td></tr><tr><td><a href=\"ServiceRequest-somaticServiceRequest.html\">General</a></td></tr><tr><td><a href=\"DocumentReference-somaticVCFfile.html\">General</a></td></tr><tr><td><a href=\"DocumentReference-somaticCalledRegions.html\">General</a></td></tr><tr><td><a href=\"DocumentReference-somaticRNAstudiedRegions.html\">General</a></td></tr><tr><td><a href=\"DocumentReference-somaticFusionFile.html\">General</a></td></tr></table></div>"
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"extension" : [
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"url" : "http://hl7.org/fhir/build/StructureDefinition/description",
"valueString" : "GenomicStudy - Trio study - De novo mutation 1"
},
{
"url" : "http://hl7.org/fhir/build/StructureDefinition/title",
"valueString" : "genomicstudy-example"
}
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🔗 "reference" : "GenomicStudy/example",
"display" : "General"
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"url" : "http://hl7.org/fhir/build/StructureDefinition/description",
"valueString" : "GenomicStudy - Trio study - De novo mutation 2"
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{
"url" : "http://hl7.org/fhir/build/StructureDefinition/title",
"valueString" : "genomicstudy-example-trio2"
}
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"item" : {
🔗 "reference" : "GenomicStudy/example-trio2",
"display" : "General"
}
},
{
"extension" : [
{
"url" : "http://hl7.org/fhir/build/StructureDefinition/description",
"valueString" : "GenomicStudy - Lung mass - sequencing analysis"
},
{
"url" : "http://hl7.org/fhir/build/StructureDefinition/title",
"valueString" : "genomicstudy-example-lungMass"
}
],
"item" : {
🔗 "reference" : "GenomicStudy/example-lungMass",
"display" : "General"
}
},
{
"extension" : [
{
"url" : "http://hl7.org/fhir/build/StructureDefinition/description",
"valueString" : "GenomicStudy - Pharmacogenomics (PGX) panel"
},
{
"url" : "http://hl7.org/fhir/build/StructureDefinition/title",
"valueString" : "genomicstudy-example-pgx"
}
],
"item" : {
🔗 "reference" : "GenomicStudy/example-pgx",
"display" : "General"
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{
"extension" : [
{
"url" : "http://hl7.org/fhir/build/StructureDefinition/description",
"valueString" : "GenomicStudy - Somatic tumor/normal cancer panel"
},
{
"url" : "http://hl7.org/fhir/build/StructureDefinition/title",
"valueString" : "genomicstudy-example-somaticStudy"
}
],
"item" : {
🔗 "reference" : "GenomicStudy/example-somaticStudy",
"display" : "General"
}
},
{
"extension" : [
{
"url" : "http://hl7.org/fhir/build/StructureDefinition/description",
"valueString" : "DocumentReference - CNV Analysis - called"
},
{
"url" : "http://hl7.org/fhir/build/StructureDefinition/title",
"valueString" : "DocumentReference-CNVAnalysis_called"
}
],
"item" : {
🔗 "reference" : "DocumentReference/CNVAnalysis-called",
"display" : "General"
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},
{
"extension" : [
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"url" : "http://hl7.org/fhir/build/StructureDefinition/description",
"valueString" : "DocumentReference - Genomic BED File"
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{
"url" : "http://hl7.org/fhir/build/StructureDefinition/title",
"valueString" : "DocumentReference-genomicBEDfile"
}
],
"item" : {
🔗 "reference" : "DocumentReference/genomicBEDfile",
"display" : "General"
}
},
{
"extension" : [
{
"url" : "http://hl7.org/fhir/build/StructureDefinition/description",
"valueString" : "DocumentReference - Genomic File 1"
},
{
"url" : "http://hl7.org/fhir/build/StructureDefinition/title",
"valueString" : "DocumentReference-genomicFile1"
}
],
"item" : {
🔗 "reference" : "DocumentReference/genomicFile1",
"display" : "General"
}
},
{
"extension" : [
{
"url" : "http://hl7.org/fhir/build/StructureDefinition/description",
"valueString" : "DocumentReference - Genomic File 2"
},
{
"url" : "http://hl7.org/fhir/build/StructureDefinition/title",
"valueString" : "DocumentReference-genomicFile2"
}
],
"item" : {
🔗 "reference" : "DocumentReference/genomicFile2",
"display" : "General"
}
},
{
"extension" : [
{
"url" : "http://hl7.org/fhir/build/StructureDefinition/description",
"valueString" : "DocumentReference - Genomic File 3"
},
{
"url" : "http://hl7.org/fhir/build/StructureDefinition/title",
"valueString" : "DocumentReference-genomicFile3"
}
],
"item" : {
🔗 "reference" : "DocumentReference/genomicFile3",
"display" : "General"
}
},
{
"extension" : [
{
"url" : "http://hl7.org/fhir/build/StructureDefinition/description",
"valueString" : "DocumentReference - Genomic File 4"
},
{
"url" : "http://hl7.org/fhir/build/StructureDefinition/title",
"valueString" : "DocumentReference-genomicFile4"
}
],
"item" : {
🔗 "reference" : "DocumentReference/genomicFile4",
"display" : "General"
}
},
{
"extension" : [
{
"url" : "http://hl7.org/fhir/build/StructureDefinition/description",
"valueString" : "DocumentReference - Genomic VCF File - CNV"
},
{
"url" : "http://hl7.org/fhir/build/StructureDefinition/title",
"valueString" : "DocumentReference-genomicVCFfile_cnv"
}
],
"item" : {
🔗 "reference" : "DocumentReference/genomicVCFfile-cnv",
"display" : "General"
}
},
{
"extension" : [
{
"url" : "http://hl7.org/fhir/build/StructureDefinition/description",
"valueString" : "DocumentReference - Genomic VCF File - Simple"
},
{
"url" : "http://hl7.org/fhir/build/StructureDefinition/title",
"valueString" : "DocumentReference-genomicVCFfile_simple"
}
],
"item" : {
🔗 "reference" : "DocumentReference/genomicVCFfile-simple",
"display" : "General"
}
},
{
"extension" : [
{
"url" : "http://hl7.org/fhir/build/StructureDefinition/description",
"valueString" : "DocumentReference - Genomic VCF File"
},
{
"url" : "http://hl7.org/fhir/build/StructureDefinition/title",
"valueString" : "DocumentReference-genomicVCFfile"
}
],
"item" : {
🔗 "reference" : "DocumentReference/genomicVCFfile",
"display" : "General"
}
},
{
"extension" : [
{
"url" : "http://hl7.org/fhir/build/StructureDefinition/description",
"valueString" : "DocumentReference - Simple Variant Analysis - Called"
},
{
"url" : "http://hl7.org/fhir/build/StructureDefinition/title",
"valueString" : "DocumentReference-SimpleVariantAnalysis_called"
}
],
"item" : {
🔗 "reference" : "DocumentReference/SimpleVariantAnalysis-called",
"display" : "General"
}
},
{
"extension" : [
{
"url" : "http://hl7.org/fhir/build/StructureDefinition/description",
"valueString" : "DocumentReference - WES Full Sequenced Region - GRCh38"
},
{
"url" : "http://hl7.org/fhir/build/StructureDefinition/title",
"valueString" : "DocumentReference-WES_FullSequencedRegion_GRCh38"
}
],
"item" : {
🔗 "reference" : "DocumentReference/WES-FullSequencedRegion-GRCh38",
"display" : "General"
}
},
{
"extension" : [
{
"url" : "http://hl7.org/fhir/build/StructureDefinition/description",
"valueString" : "DocumentReference - Genomic File of a Proband"
},
{
"url" : "http://hl7.org/fhir/build/StructureDefinition/title",
"valueString" : "DocumentReference-genomicFileProband"
}
],
"item" : {
🔗 "reference" : "DocumentReference/genomicFileProband",
"display" : "General"
}
},
{
"extension" : [
{
"url" : "http://hl7.org/fhir/build/StructureDefinition/description",
"valueString" : "DocumentReference - Genomic File of a Mother"
},
{
"url" : "http://hl7.org/fhir/build/StructureDefinition/title",
"valueString" : "DocumentReference-genomicFileMother"
}
],
"item" : {
🔗 "reference" : "DocumentReference/genomicFileMother",
"display" : "General"
}
},
{
"extension" : [
{
"url" : "http://hl7.org/fhir/build/StructureDefinition/description",
"valueString" : "DocumentReference - Genomic File of a Father"
},
{
"url" : "http://hl7.org/fhir/build/StructureDefinition/title",
"valueString" : "DocumentReference-genomicFileFather"
}
],
"item" : {
🔗 "reference" : "DocumentReference/genomicFileFather",
"display" : "General"
}
},
{
"extension" : [
{
"url" : "http://hl7.org/fhir/build/StructureDefinition/description",
"valueString" : "DocumentReference - Genomic File of a Trio: proband, mother, and father"
},
{
"url" : "http://hl7.org/fhir/build/StructureDefinition/title",
"valueString" : "DocumentReference-genomicFileGroupAsSubject"
}
],
"item" : {
🔗 "reference" : "DocumentReference/genomicFileGroupAsSubject",
"display" : "General"
}
},
{
"extension" : [
{
"url" : "http://hl7.org/fhir/build/StructureDefinition/description",
"valueString" : "Device - NGS Device"
},
{
"url" : "http://hl7.org/fhir/build/StructureDefinition/title",
"valueString" : "Device-NGS-device"
}
],
"item" : {
🔗 "reference" : "Device/NGS-device",
"display" : "General"
}
},
{
"extension" : [
{
"url" : "http://hl7.org/fhir/build/StructureDefinition/description",
"valueString" : "Device - Triodenovo (Software)"
},
{
"url" : "http://hl7.org/fhir/build/StructureDefinition/title",
"valueString" : "Device-Triodenovo-SW"
}
],
"item" : {
🔗 "reference" : "Device/Triodenovo-SW",
"display" : "General"
}
},
{
"extension" : [
{
"url" : "http://hl7.org/fhir/build/StructureDefinition/description",
"valueString" : "Encounter - denovo"
},
{
"url" : "http://hl7.org/fhir/build/StructureDefinition/title",
"valueString" : "Encounter-denovoEncounter"
}
],
"item" : {
🔗 "reference" : "Encounter/denovoEncounter",
"display" : "General"
}
},
{
"extension" : [
{
"url" : "http://hl7.org/fhir/build/StructureDefinition/description",
"valueString" : "Encounter - genomic"
},
{
"url" : "http://hl7.org/fhir/build/StructureDefinition/title",
"valueString" : "Encounter-genomicEncounter"
}
],
"item" : {
🔗 "reference" : "Encounter/genomicEncounter",
"display" : "General"
}
},
{
"extension" : [
{
"url" : "http://hl7.org/fhir/build/StructureDefinition/description",
"valueString" : "Group - A group of a trio study including proband, mother, and father"
},
{
"url" : "http://hl7.org/fhir/build/StructureDefinition/title",
"valueString" : "Group-denovoFamily"
}
],
"item" : {
🔗 "reference" : "Group/groupDenovoFamily",
"display" : "General"
}
},
{
"extension" : [
{
"url" : "http://hl7.org/fhir/build/StructureDefinition/description",
"valueString" : "Patient - denovoChild"
},
{
"url" : "http://hl7.org/fhir/build/StructureDefinition/title",
"valueString" : "Patient-denovoChild"
}
],
"item" : {
🔗 "reference" : "Patient/denovoChild",
"display" : "General"
}
},
{
"extension" : [
{
"url" : "http://hl7.org/fhir/build/StructureDefinition/description",
"valueString" : "Patient - denovoFather"
},
{
"url" : "http://hl7.org/fhir/build/StructureDefinition/title",
"valueString" : "Patient-denovoFather"
}
],
"item" : {
🔗 "reference" : "Patient/denovoFather",
"display" : "General"
}
},
{
"extension" : [
{
"url" : "http://hl7.org/fhir/build/StructureDefinition/description",
"valueString" : "Patient - denovoMother"
},
{
"url" : "http://hl7.org/fhir/build/StructureDefinition/title",
"valueString" : "Patient-denovoMother"
}
],
"item" : {
🔗 "reference" : "Patient/denovoMother",
"display" : "General"
}
},
{
"extension" : [
{
"url" : "http://hl7.org/fhir/build/StructureDefinition/description",
"valueString" : "Patient - Genomic"
},
{
"url" : "http://hl7.org/fhir/build/StructureDefinition/title",
"valueString" : "Patient-genomicPatient"
}
],
"item" : {
🔗 "reference" : "Patient/genomicPatient",
"display" : "General"
}
},
{
"extension" : [
{
"url" : "http://hl7.org/fhir/build/StructureDefinition/description",
"valueString" : "Practitioner - Example 1"
},
{
"url" : "http://hl7.org/fhir/build/StructureDefinition/title",
"valueString" : "Practitioner-practitioner01"
}
],
"item" : {
🔗 "reference" : "Practitioner/practitioner01",
"display" : "General"
}
},
{
"extension" : [
{
"url" : "http://hl7.org/fhir/build/StructureDefinition/description",
"valueString" : "Practitioner - Example 2"
},
{
"url" : "http://hl7.org/fhir/build/StructureDefinition/title",
"valueString" : "Practitioner-practitioner02"
}
],
"item" : {
🔗 "reference" : "Practitioner/practitioner02",
"display" : "General"
}
},
{
"extension" : [
{
"url" : "http://hl7.org/fhir/build/StructureDefinition/description",
"valueString" : "RelatedPerson - a proband's mother"
},
{
"url" : "http://hl7.org/fhir/build/StructureDefinition/title",
"valueString" : "RelatedPerson-denovoMother"
}
],
"item" : {
🔗 "reference" : "RelatedPerson/relatedPersonDenovoMother",
"display" : "General"
}
},
{
"extension" : [
{
"url" : "http://hl7.org/fhir/build/StructureDefinition/description",
"valueString" : "RelatedPerson - a proband's father"
},
{
"url" : "http://hl7.org/fhir/build/StructureDefinition/title",
"valueString" : "RelatedPerson-denovoFather"
}
],
"item" : {
🔗 "reference" : "RelatedPerson/relatedPersonDenovoFather",
"display" : "General"
}
},
{
"extension" : [
{
"url" : "http://hl7.org/fhir/build/StructureDefinition/description",
"valueString" : "ServiceRequest - Genomic Example"
},
{
"url" : "http://hl7.org/fhir/build/StructureDefinition/title",
"valueString" : "ServiceRequest-genomicServiceRequest"
}
],
"item" : {
🔗 "reference" : "ServiceRequest/genomicServiceRequest",
"display" : "General"
}
},
{
"extension" : [
{
"url" : "http://hl7.org/fhir/build/StructureDefinition/description",
"valueString" : "ServiceRequest - Genomic Example 2"
},
{
"url" : "http://hl7.org/fhir/build/StructureDefinition/title",
"valueString" : "ServiceRequest-genomicServiceRequest2"
}
],
"item" : {
🔗 "reference" : "ServiceRequest/genomicServiceRequest2",
"display" : "General"
}
},
{
"extension" : [
{
"url" : "http://hl7.org/fhir/build/StructureDefinition/description",
"valueString" : "ServiceRequest - Genomic Example 3"
},
{
"url" : "http://hl7.org/fhir/build/StructureDefinition/title",
"valueString" : "ServiceRequest-genomicServiceRequest3"
}
],
"item" : {
🔗 "reference" : "ServiceRequest/genomicServiceRequest3",
"display" : "General"
}
},
{
"extension" : [
{
"url" : "http://hl7.org/fhir/build/StructureDefinition/description",
"valueString" : "ServiceRequest - Genomic Example 4"
},
{
"url" : "http://hl7.org/fhir/build/StructureDefinition/title",
"valueString" : "ServiceRequest-genomicServiceRequest4"
}
],
"item" : {
🔗 "reference" : "ServiceRequest/genomicServiceRequest4",
"display" : "General"
}
},
{
"extension" : [
{
"url" : "http://hl7.org/fhir/build/StructureDefinition/description",
"valueString" : "ServiceRequest - Genomic service request that references a proband as a subject"
},
{
"url" : "http://hl7.org/fhir/build/StructureDefinition/title",
"valueString" : "ServiceRequest-genomicSRProband"
}
],
"item" : {
🔗 "reference" : "ServiceRequest/genomicSRProband",
"display" : "General"
}
},
{
"extension" : [
{
"url" : "http://hl7.org/fhir/build/StructureDefinition/description",
"valueString" : "ServiceRequest - Genomic service request that references a proband's mother as a subject"
},
{
"url" : "http://hl7.org/fhir/build/StructureDefinition/title",
"valueString" : "ServiceRequest-genomicSRMother"
}
],
"item" : {
🔗 "reference" : "ServiceRequest/genomicSRMother",
"display" : "General"
}
},
{
"extension" : [
{
"url" : "http://hl7.org/fhir/build/StructureDefinition/description",
"valueString" : "ServiceRequest - Genomic service request that references a proband's father as a subject"
},
{
"url" : "http://hl7.org/fhir/build/StructureDefinition/title",
"valueString" : "ServiceRequest-genomicSRFather"
}
],
"item" : {
🔗 "reference" : "ServiceRequest/genomicSRFather",
"display" : "General"
}
},
{
"extension" : [
{
"url" : "http://hl7.org/fhir/build/StructureDefinition/description",
"valueString" : "Specimen - Denovo 1"
},
{
"url" : "http://hl7.org/fhir/build/StructureDefinition/title",
"valueString" : "Specimen-denovo-1"
}
],
"item" : {
🔗 "reference" : "Specimen/denovo-1",
"display" : "General"
}
},
{
"extension" : [
{
"url" : "http://hl7.org/fhir/build/StructureDefinition/description",
"valueString" : "Specimen - Denovo 2"
},
{
"url" : "http://hl7.org/fhir/build/StructureDefinition/title",
"valueString" : "Specimen-denovo-2"
}
],
"item" : {
🔗 "reference" : "Specimen/denovo-2",
"display" : "General"
}
},
{
"extension" : [
{
"url" : "http://hl7.org/fhir/build/StructureDefinition/description",
"valueString" : "Specimen - Denovo 3"
},
{
"url" : "http://hl7.org/fhir/build/StructureDefinition/title",
"valueString" : "Specimen-denovo-3"
}
],
"item" : {
🔗 "reference" : "Specimen/denovo-3",
"display" : "General"
}
},
{
"extension" : [
{
"url" : "http://hl7.org/fhir/build/StructureDefinition/description",
"valueString" : "Specimen of a Proband as a subject"
},
{
"url" : "http://hl7.org/fhir/build/StructureDefinition/title",
"valueString" : "Specimen-specimenProband"
}
],
"item" : {
🔗 "reference" : "Specimen/specimenProband",
"display" : "General"
}
},
{
"extension" : [
{
"url" : "http://hl7.org/fhir/build/StructureDefinition/description",
"valueString" : "Specimen of a proband's mother as a subject"
},
{
"url" : "http://hl7.org/fhir/build/StructureDefinition/title",
"valueString" : "Specimen-specimenMother"
}
],
"item" : {
🔗 "reference" : "Specimen/specimenMother",
"display" : "General"
}
},
{
"extension" : [
{
"url" : "http://hl7.org/fhir/build/StructureDefinition/description",
"valueString" : "Specimen of a proband's father as a subject"
},
{
"url" : "http://hl7.org/fhir/build/StructureDefinition/title",
"valueString" : "Specimen-specimenFather"
}
],
"item" : {
🔗 "reference" : "Specimen/specimenFather",
"display" : "General"
}
},
{
"extension" : [
{
"url" : "http://hl7.org/fhir/build/StructureDefinition/description",
"valueString" : "Specimen - Genomic"
},
{
"url" : "http://hl7.org/fhir/build/StructureDefinition/title",
"valueString" : "Specimen-genomicSpecimen"
}
],
"item" : {
🔗 "reference" : "Specimen/genomicSpecimen",
"display" : "General"
}
},
{
"extension" : [
{
"url" : "http://hl7.org/fhir/build/StructureDefinition/description",
"valueString" : "Patient - PGX Patient (Adam B. Everyman)"
},
{
"url" : "http://hl7.org/fhir/build/StructureDefinition/title",
"valueString" : "Patient-pgxPatient"
}
],
"item" : {
🔗 "reference" : "Patient/pgxPatient",
"display" : "General"
}
},
{
"extension" : [
{
"url" : "http://hl7.org/fhir/build/StructureDefinition/description",
"valueString" : "Specimen - PGX blood specimen"
},
{
"url" : "http://hl7.org/fhir/build/StructureDefinition/title",
"valueString" : "Specimen-pgxSpecimen"
}
],
"item" : {
🔗 "reference" : "Specimen/pgxSpecimen",
"display" : "General"
}
},
{
"extension" : [
{
"url" : "http://hl7.org/fhir/build/StructureDefinition/description",
"valueString" : "ServiceRequest - PGX panel service request"
},
{
"url" : "http://hl7.org/fhir/build/StructureDefinition/title",
"valueString" : "ServiceRequest-pgxServiceRequest"
}
],
"item" : {
🔗 "reference" : "ServiceRequest/pgxServiceRequest",
"display" : "General"
}
},
{
"extension" : [
{
"url" : "http://hl7.org/fhir/build/StructureDefinition/description",
"valueString" : "DocumentReference - PGX VCF output file"
},
{
"url" : "http://hl7.org/fhir/build/StructureDefinition/title",
"valueString" : "DocumentReference-pgxVCFfile"
}
],
"item" : {
🔗 "reference" : "DocumentReference/pgxVCFfile",
"display" : "General"
}
},
{
"extension" : [
{
"url" : "http://hl7.org/fhir/build/StructureDefinition/description",
"valueString" : "Patient - Somatic cancer patient (Junior Hamsburg)"
},
{
"url" : "http://hl7.org/fhir/build/StructureDefinition/title",
"valueString" : "Patient-somaticPatient"
}
],
"item" : {
🔗 "reference" : "Patient/somaticPatient",
"display" : "General"
}
},
{
"extension" : [
{
"url" : "http://hl7.org/fhir/build/StructureDefinition/description",
"valueString" : "Specimen - Tumor biopsy (FFPE lung)"
},
{
"url" : "http://hl7.org/fhir/build/StructureDefinition/title",
"valueString" : "Specimen-tumorSpecimen"
}
],
"item" : {
🔗 "reference" : "Specimen/tumorSpecimen",
"display" : "General"
}
},
{
"extension" : [
{
"url" : "http://hl7.org/fhir/build/StructureDefinition/description",
"valueString" : "Specimen - Matched normal blood specimen"
},
{
"url" : "http://hl7.org/fhir/build/StructureDefinition/title",
"valueString" : "Specimen-normalSpecimen"
}
],
"item" : {
🔗 "reference" : "Specimen/normalSpecimen",
"display" : "General"
}
},
{
"extension" : [
{
"url" : "http://hl7.org/fhir/build/StructureDefinition/description",
"valueString" : "ServiceRequest - Somatic cancer panel service request"
},
{
"url" : "http://hl7.org/fhir/build/StructureDefinition/title",
"valueString" : "ServiceRequest-somaticServiceRequest"
}
],
"item" : {
🔗 "reference" : "ServiceRequest/somaticServiceRequest",
"display" : "General"
}
},
{
"extension" : [
{
"url" : "http://hl7.org/fhir/build/StructureDefinition/description",
"valueString" : "DocumentReference - Somatic DNA VCF output file"
},
{
"url" : "http://hl7.org/fhir/build/StructureDefinition/title",
"valueString" : "DocumentReference-somaticVCFfile"
}
],
"item" : {
🔗 "reference" : "DocumentReference/somaticVCFfile",
"display" : "General"
}
},
{
"extension" : [
{
"url" : "http://hl7.org/fhir/build/StructureDefinition/description",
"valueString" : "DocumentReference - Somatic called regions BED file"
},
{
"url" : "http://hl7.org/fhir/build/StructureDefinition/title",
"valueString" : "DocumentReference-somaticCalledRegions"
}
],
"item" : {
🔗 "reference" : "DocumentReference/somaticCalledRegions",
"display" : "General"
}
},
{
"extension" : [
{
"url" : "http://hl7.org/fhir/build/StructureDefinition/description",
"valueString" : "DocumentReference - Somatic RNA studied regions BED file"
},
{
"url" : "http://hl7.org/fhir/build/StructureDefinition/title",
"valueString" : "DocumentReference-somaticRNAstudiedRegions"
}
],
"item" : {
🔗 "reference" : "DocumentReference/somaticRNAstudiedRegions",
"display" : "General"
}
},
{
"extension" : [
{
"url" : "http://hl7.org/fhir/build/StructureDefinition/description",
"valueString" : "DocumentReference - Somatic RNA fusions/transcript variants VCF"
},
{
"url" : "http://hl7.org/fhir/build/StructureDefinition/title",
"valueString" : "DocumentReference-somaticFusionFile"
}
],
"item" : {
🔗 "reference" : "DocumentReference/somaticFusionFile",
"display" : "General"
}
}
]
}
IG © 2026+ HL7 International / Clinical Genomics.
Package hl7.fhir.uv.cg-incubator#0.1.0-ci-build based on FHIR 6.0.0-ballot3.
Generated
2026-03-24
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