{
  "resourceType" : "StructureDefinition",
  "id" : "SpecimenInformation",
  "language" : "en",
  "text" : {
    "status" : "extensions"
  },
  "url" : "https://hl7.cz/fhir/img/StructureDefinition/SpecimenInformation",
  "version" : "0.1.0-ballot",
  "name" : "LogEnSpecimenInformationCz",
  "title" : "A.2.3 - Sample information",
  "status" : "draft",
  "date" : "2026-05-26T08:31:12+00:00",
  "publisher" : "HL7 Czech Republic",
  "contact" : [{
    "name" : "HL7 Czech Republic",
    "telecom" : [{
      "system" : "url",
      "value" : "https://www.hl7.cz/"
    }]
  }],
  "description" : "Imaging Report - Imaging Report sample information - A.2.3 \r\nInformation about the sample if the subject of the examination is a sample.",
  "jurisdiction" : [{
    "coding" : [{
      "system" : "urn:iso:std:iso:3166",
      "code" : "CZ",
      "display" : "Czechia"
    }]
  }],
  "fhirVersion" : "4.0.1",
  "kind" : "logical",
  "abstract" : false,
  "type" : "https://hl7.cz/fhir/img/StructureDefinition/SpecimenInformation",
  "baseDefinition" : "http://hl7.org/fhir/StructureDefinition/Base",
  "derivation" : "specialization",
  "snapshot" : {
    "extension" : [{
      "url" : "http://hl7.org/fhir/tools/StructureDefinition/snapshot-base-version",
      "valueString" : "4.0.1"
    }],
    "element" : [{
      "id" : "SpecimenInformation",
      "path" : "SpecimenInformation",
      "short" : "A.2.3 - Sample information",
      "definition" : "Imaging Report - Imaging Report sample information - A.2.3 \r\nInformation about the sample if the subject of the examination is a sample.",
      "min" : 0,
      "max" : "*",
      "base" : {
        "path" : "Base",
        "min" : 0,
        "max" : "*"
      },
      "isModifier" : false
    },
    {
      "id" : "SpecimenInformation.identifier",
      "path" : "SpecimenInformation.identifier",
      "short" : "A.2.3.1 - Specimen identifier",
      "definition" : "Sample identifier that is unique within a defined scope, e.g., identifier assigned by an ordering system, collection site, receiving site, etc.",
      "min" : 1,
      "max" : "*",
      "base" : {
        "path" : "SpecimenInformation.identifier",
        "min" : 1,
        "max" : "*"
      },
      "type" : [{
        "code" : "Identifier"
      }]
    },
    {
      "id" : "SpecimenInformation.species",
      "path" : "SpecimenInformation.species",
      "short" : "A.2.3.2 - Type of species",
      "definition" : "Biological species refers to samples taken from non-human subjects. - Preferred system(s): SNOMED CT [TypeOfSpeciesCodelist]",
      "min" : 0,
      "max" : "1",
      "base" : {
        "path" : "SpecimenInformation.species",
        "min" : 0,
        "max" : "1"
      },
      "type" : [{
        "code" : "CodeableConcept"
      }]
    },
    {
      "id" : "SpecimenInformation.material",
      "path" : "SpecimenInformation.material",
      "short" : "A.2.3.3 - Material",
      "definition" : "Material of the collected and examined sample. - Preferred system(s): SNOMED CT [SpecimenMaterialCodelist]",
      "min" : 1,
      "max" : "1",
      "base" : {
        "path" : "SpecimenInformation.material",
        "min" : 1,
        "max" : "1"
      },
      "type" : [{
        "code" : "CodeableConcept"
      }]
    },
    {
      "id" : "SpecimenInformation.collectionDate",
      "path" : "SpecimenInformation.collectionDate",
      "short" : "A.2.3.4 - Collection period",
      "definition" : "Date and time or duration of sample collection. - Preferred system(s): ISO 8601",
      "min" : 0,
      "max" : "1",
      "base" : {
        "path" : "SpecimenInformation.collectionDate",
        "min" : 0,
        "max" : "1"
      },
      "type" : [{
        "code" : "dateTime"
      }]
    },
    {
      "id" : "SpecimenInformation.anatomicLocation",
      "path" : "SpecimenInformation.anatomicLocation",
      "short" : "A.2.3.5 - Anatomical location",
      "definition" : "Anatomical location (position within the body, laterality) from which the material is taken, such as 'left elbow'. - Preferred system(s): SNOMED CT [BodyLacation|LocationICT-O-3|Laterality Codelists]",
      "min" : 0,
      "max" : "1",
      "base" : {
        "path" : "SpecimenInformation.anatomicLocation",
        "min" : 0,
        "max" : "1"
      },
      "type" : [{
        "code" : "CodeableConcept"
      }]
    },
    {
      "id" : "SpecimenInformation.morphology",
      "path" : "SpecimenInformation.morphology",
      "short" : "A.2.3.6 - Morphology",
      "definition" : "Morphological abnormalities of the anatomical location from which the material is taken, such as 'lesion or ulcer'. - Preferred system(s): SNOMED CT [MorfologyCodelist]",
      "min" : 0,
      "max" : "1",
      "base" : {
        "path" : "SpecimenInformation.morphology",
        "min" : 0,
        "max" : "1"
      },
      "type" : [{
        "code" : "CodeableConcept"
      }]
    },
    {
      "id" : "SpecimenInformation.sourceDevice",
      "path" : "SpecimenInformation.sourceDevice",
      "short" : "A.2.3.7 - Source Device",
      "definition" : "In case the material is not directly taken from the patient but comes from an object related to the patient, such as a 'catheter'.\n - Preferred system(s): SNOMED CT\n - Preferred system(s): EMDN",
      "min" : 0,
      "max" : "1",
      "base" : {
        "path" : "SpecimenInformation.sourceDevice",
        "min" : 0,
        "max" : "1"
      },
      "type" : [{
        "code" : "CodeableConcept"
      }]
    },
    {
      "id" : "SpecimenInformation.procedure",
      "path" : "SpecimenInformation.procedure",
      "short" : "A.2.3.8 - Collection procedure/method",
      "definition" : "Method, manner of sample collection, if relevant to the results. - Preferred system(s): SNOMED CT [CollectionMethodCodelist]",
      "min" : 0,
      "max" : "1",
      "base" : {
        "path" : "SpecimenInformation.procedure",
        "min" : 0,
        "max" : "1"
      },
      "type" : [{
        "code" : "CodeableConcept"
      }]
    },
    {
      "id" : "SpecimenInformation.receivedDateTime",
      "path" : "SpecimenInformation.receivedDateTime",
      "short" : "A.2.3.9 - Received date",
      "definition" : "Date and time the sample is received by the facility performing the examination. - Preferred system(s): ISO 8601",
      "min" : 0,
      "max" : "1",
      "base" : {
        "path" : "SpecimenInformation.receivedDateTime",
        "min" : 0,
        "max" : "1"
      },
      "type" : [{
        "code" : "dateTime"
      }]
    }]
  },
  "differential" : {
    "element" : [{
      "id" : "SpecimenInformation",
      "path" : "SpecimenInformation",
      "short" : "A.2.3 - Sample information",
      "definition" : "Imaging Report - Imaging Report sample information - A.2.3 \r\nInformation about the sample if the subject of the examination is a sample."
    },
    {
      "id" : "SpecimenInformation.identifier",
      "path" : "SpecimenInformation.identifier",
      "short" : "A.2.3.1 - Specimen identifier",
      "definition" : "Sample identifier that is unique within a defined scope, e.g., identifier assigned by an ordering system, collection site, receiving site, etc.",
      "min" : 1,
      "max" : "*",
      "type" : [{
        "code" : "Identifier"
      }]
    },
    {
      "id" : "SpecimenInformation.species",
      "path" : "SpecimenInformation.species",
      "short" : "A.2.3.2 - Type of species",
      "definition" : "Biological species refers to samples taken from non-human subjects. - Preferred system(s): SNOMED CT [TypeOfSpeciesCodelist]",
      "min" : 0,
      "max" : "1",
      "type" : [{
        "code" : "CodeableConcept"
      }]
    },
    {
      "id" : "SpecimenInformation.material",
      "path" : "SpecimenInformation.material",
      "short" : "A.2.3.3 - Material",
      "definition" : "Material of the collected and examined sample. - Preferred system(s): SNOMED CT [SpecimenMaterialCodelist]",
      "min" : 1,
      "max" : "1",
      "type" : [{
        "code" : "CodeableConcept"
      }]
    },
    {
      "id" : "SpecimenInformation.collectionDate",
      "path" : "SpecimenInformation.collectionDate",
      "short" : "A.2.3.4 - Collection period",
      "definition" : "Date and time or duration of sample collection. - Preferred system(s): ISO 8601",
      "min" : 0,
      "max" : "1",
      "type" : [{
        "code" : "dateTime"
      }]
    },
    {
      "id" : "SpecimenInformation.anatomicLocation",
      "path" : "SpecimenInformation.anatomicLocation",
      "short" : "A.2.3.5 - Anatomical location",
      "definition" : "Anatomical location (position within the body, laterality) from which the material is taken, such as 'left elbow'. - Preferred system(s): SNOMED CT [BodyLacation|LocationICT-O-3|Laterality Codelists]",
      "min" : 0,
      "max" : "1",
      "type" : [{
        "code" : "CodeableConcept"
      }]
    },
    {
      "id" : "SpecimenInformation.morphology",
      "path" : "SpecimenInformation.morphology",
      "short" : "A.2.3.6 - Morphology",
      "definition" : "Morphological abnormalities of the anatomical location from which the material is taken, such as 'lesion or ulcer'. - Preferred system(s): SNOMED CT [MorfologyCodelist]",
      "min" : 0,
      "max" : "1",
      "type" : [{
        "code" : "CodeableConcept"
      }]
    },
    {
      "id" : "SpecimenInformation.sourceDevice",
      "path" : "SpecimenInformation.sourceDevice",
      "short" : "A.2.3.7 - Source Device",
      "definition" : "In case the material is not directly taken from the patient but comes from an object related to the patient, such as a 'catheter'.\n - Preferred system(s): SNOMED CT\n - Preferred system(s): EMDN",
      "min" : 0,
      "max" : "1",
      "type" : [{
        "code" : "CodeableConcept"
      }]
    },
    {
      "id" : "SpecimenInformation.procedure",
      "path" : "SpecimenInformation.procedure",
      "short" : "A.2.3.8 - Collection procedure/method",
      "definition" : "Method, manner of sample collection, if relevant to the results. - Preferred system(s): SNOMED CT [CollectionMethodCodelist]",
      "min" : 0,
      "max" : "1",
      "type" : [{
        "code" : "CodeableConcept"
      }]
    },
    {
      "id" : "SpecimenInformation.receivedDateTime",
      "path" : "SpecimenInformation.receivedDateTime",
      "short" : "A.2.3.9 - Received date",
      "definition" : "Date and time the sample is received by the facility performing the examination. - Preferred system(s): ISO 8601",
      "min" : 0,
      "max" : "1",
      "type" : [{
        "code" : "dateTime"
      }]
    }]
  }
}