HL7 Czech Imaging Report IG
0.1.0-ballot - ci-build CZ

HL7 Czech Imaging Report IG, published by HL7 Czech Republic. This guide is not an authorized publication; it is the continuous build for version 0.1.0-ballot built by the FHIR (HL7® FHIR® Standard) CI Build. This version is based on the current content of https://github.com/HL7-cz/img/ and changes regularly. See the Directory of published versions

## Resource Profile: Specimen: Obligations

Official URL: https://hl7.cz/fhir/img/StructureDefinition/cz-specimen-obl-img | Version: 0.1.0-ballot | Highlight text changes?
Draft as of 2026-05-26 | Computable Name: CZ_SpecimenObligationsImg

This profile defines obligations for a specimen in FHIR for the purpose of this guide.

Usages:

- This Profile is not used by any profiles in this Specification

You can also check for usages in the FHIR IG Statistics

### Formal Views of Profile Content

Description Differentials, Snapshots, and other representations.

- Key Elements Table
- Differential Table
- Snapshot Table
- Obligations
- Statistics/References
- All

Name | Flags | Card. | Type | Description & Constraints Filter: Bindings Constraints Obligations
--- | --- | --- | --- | ---
Specimen |  | 0..* | CZ_Specimen | Czech Specimen
implicitRules | ?!Σ | 0..1 | uri | A set of rules under which this content was created
modifierExtension | ?! | 0..* | Extension | Extensions that cannot be ignored
identifier | SO Σ | 0..* | Identifier | External Identifier
Obligations | Actor
SHOULD:able-to-populate | Creator_L2
SHALL:able-to-populate | Creator_L3
SHOULD:display | Consumer_L2
SHALL:display | Consumer_L3
status | ?!S Σ | 0..1 | code | available | unavailable | unsatisfactory | entered-in-error Binding: SpecimenStatus (required): Codes providing the status/availability of a specimen.
type | O Σ | 0..1 | CodeableConcept | Kind of material that forms the specimen Binding: Materiál vzorků (preferred)
Obligations | Actor
SHOULD:able-to-populate | Creator_L2
SHALL:able-to-populate | Creator_L3
SHOULD:display | Consumer_L2
SHALL:display | Consumer_L3
subject | SO Σ | 0..1 | Reference(Group | Device: Performer/Observer (CZ core) | Medical Device (CZ core) | Substance | Location (CZ core) | Patient (CZ core)) | In the initial iteration of the Czech interoperability project, this is CZ_PatientCore.
Obligations | Actor
SHOULD:able-to-populate | Creator_L2
SHALL:able-to-populate | Creator_L3
SHOULD:display | Consumer_L2
SHALL:display | Consumer_L3
receivedTime | SO Σ | 0..1 | dateTime | The time when specimen was received for processing
Obligations | Actor
SHOULD:able-to-populate | Creator_L2
SHALL:able-to-populate | Creator_L3
SHOULD:display | Consumer_L2
SHALL:display | Consumer_L3
parent | S | 0..* | Reference(Specimen (CZ Core)) | Specimen from which this specimen originated
request | S | 0..* | Reference(ServiceRequest) | Why the specimen was collected
condition | S Σ | 0..* | CodeableConcept | State of the specimen Binding: Hl7VSSpecimenCondition (3.0.0) (extensible): Codes describing the state of the specimen.
note | S | 0..* | Annotation | Comments
Documentation for this format

Name | Creator_L3 | Creator_L2 | Consumer_L2 | Consumer_L3
--- | --- | --- | --- | ---
Specimen |  |  |  |
identifier | SHALL:able-to-populate | SHOULD:able-to-populate | SHOULD:display | SHALL:display
type | SHALL:able-to-populate | SHOULD:able-to-populate | SHOULD:display | SHALL:display
subject | SHALL:able-to-populate | SHOULD:able-to-populate | SHOULD:display | SHALL:display
receivedTime | SHALL:able-to-populate | SHOULD:able-to-populate | SHOULD:display | SHALL:display
Documentation for this format

#### Terminology Bindings

Path | Status | Usage | ValueSet | Version | Source
Specimen.status | Base | required | SpecimenStatus | 📍4.0.1 | FHIR Std.
Specimen.type | Base | preferred | Materiál vzorků | 📦0.3.0 | HL7 Czech Terminology Implementation Guide vnull
Specimen.condition | Base | extensible | hl7VS-specimenCondition | 📍3.0.0 | THO v7.1

#### Constraints

Id | Grade | Path(s) | Description | Expression
dom-2 | error | Specimen | If the resource is contained in another resource, it SHALL NOT contain nested Resources | `contained.contained.empty()`
dom-3 | error | Specimen | If the resource is contained in another resource, it SHALL be referred to from elsewhere in the resource or SHALL refer to the containing resource | `contained.where((('#'+id in (%resource.descendants().reference | %resource.descendants().as(canonical) | %resource.descendants().as(uri) | %resource.descendants().as(url))) or descendants().where(reference = '#').exists() or descendants().where(as(canonical) = '#').exists() or descendants().where(as(canonical) = '#').exists()).not()).trace('unmatched', id).empty()`
dom-4 | error | Specimen | If a resource is contained in another resource, it SHALL NOT have a meta.versionId or a meta.lastUpdated | `contained.meta.versionId.empty() and contained.meta.lastUpdated.empty()`
dom-5 | error | Specimen | If a resource is contained in another resource, it SHALL NOT have a security label | `contained.meta.security.empty()`
dom-6 | best practice | Specimen | A resource should have narrative for robust management | `text.`div`.exists()`
ele-1 | error | **ALL** elements | All FHIR elements must have a @value or children | `hasValue() or (children().count() > id.count())`
ext-1 | error | **ALL** extensions | Must have either extensions or value[x], not both | `extension.exists() != value.exists()`

Name | Flags | Card. | Type | Description & Constraints Filter: Bindings Constraints Obligations
--- | --- | --- | --- | ---
Specimen |  | 0..* | CZ_Specimen | Czech Specimen
identifier | O | 0..* | Identifier | External Identifier
Obligations | Actor
SHOULD:able-to-populate | Creator_L2
SHALL:able-to-populate | Creator_L3
SHOULD:display | Consumer_L2
SHALL:display | Consumer_L3
type | O | 0..1 | CodeableConcept | Kind of material that forms the specimen
Obligations | Actor
SHOULD:able-to-populate | Creator_L2
SHALL:able-to-populate | Creator_L3
SHOULD:display | Consumer_L2
SHALL:display | Consumer_L3
subject | O | 0..1 | Reference(Group | Device: Performer/Observer (CZ core) | Medical Device (CZ core) | Substance | Location (CZ core) | Patient (CZ core)) | In the initial iteration of the Czech interoperability project, this is CZ_PatientCore.
Obligations | Actor
SHOULD:able-to-populate | Creator_L2
SHALL:able-to-populate | Creator_L3
SHOULD:display | Consumer_L2
SHALL:display | Consumer_L3
receivedTime | O | 0..1 | dateTime | The time when specimen was received for processing
Obligations | Actor
SHOULD:able-to-populate | Creator_L2
SHALL:able-to-populate | Creator_L3
SHOULD:display | Consumer_L2
SHALL:display | Consumer_L3
collection |  |  |  |
Slices for collected[x] |  | 0..1 | dateTime, Period | Collection time Slice: Unordered, Open by type:$this
collected[x]:collectedDateTime | O | 0..1 | dateTime | Collection time
Obligations | Actor
SHOULD:able-to-populate | Creator_L2
SHALL:able-to-populate | Creator_L3
SHOULD:display | Consumer_L2
SHALL:display | Consumer_L3
method | O | 0..1 | CodeableConcept | Technique used to perform collection
Obligations | Actor
SHOULD:able-to-populate | Creator_L2
SHALL:able-to-populate | Creator_L3
SHOULD:display | Consumer_L2
SHALL:display | Consumer_L3
bodySite | O | 0..1 | CodeableConcept | Anatomical collection site
Obligations | Actor
SHOULD:able-to-populate | Creator_L2
SHALL:able-to-populate | Creator_L3
SHOULD:display | Consumer_L2
SHALL:display | Consumer_L3
Documentation for this format

Name | Creator_L3 | Creator_L2 | Consumer_L2 | Consumer_L3
--- | --- | --- | --- | ---
Specimen |  |  |  |
identifier | SHALL:able-to-populate | SHOULD:able-to-populate | SHOULD:display | SHALL:display
type | SHALL:able-to-populate | SHOULD:able-to-populate | SHOULD:display | SHALL:display
subject | SHALL:able-to-populate | SHOULD:able-to-populate | SHOULD:display | SHALL:display
receivedTime | SHALL:able-to-populate | SHOULD:able-to-populate | SHOULD:display | SHALL:display
collection |  |  |  |
Slices for collected[x] |  |  |  |
collected[x]:collectedDateTime | SHALL:able-to-populate | SHOULD:able-to-populate | SHOULD:display | SHALL:display
method | SHALL:able-to-populate | SHOULD:able-to-populate | SHOULD:display | SHALL:display
bodySite | SHALL:able-to-populate | SHOULD:able-to-populate | SHOULD:display | SHALL:display
Documentation for this format

Name | Flags | Card. | Type | Description & Constraints Filter: Bindings Constraints Obligations
--- | --- | --- | --- | ---
Specimen |  | 0..* | CZ_Specimen | Czech Specimen
id | Σ | 0..1 | id | Logical id of this artifact
meta | Σ | 0..1 | Meta | Metadata about the resource
implicitRules | ?!Σ | 0..1 | uri | A set of rules under which this content was created
language |  | 0..1 | code | Language of the resource content Binding: CommonLanguages (preferred): A human language.
Additional Bindings | Purpose
AllLanguages | Max Binding
text |  | 0..1 | Narrative | Text summary of the resource, for human interpretation This profile does not constrain the narrative in regard to content, language, or traceability to data elements
contained |  | 0..* | Resource | Contained, inline Resources
extension |  | 0..* | Extension | Additional content defined by implementations
modifierExtension | ?! | 0..* | Extension | Extensions that cannot be ignored
identifier | SO Σ | 0..* | Identifier | External Identifier
Obligations | Actor
SHOULD:able-to-populate | Creator_L2
SHALL:able-to-populate | Creator_L3
SHOULD:display | Consumer_L2
SHALL:display | Consumer_L3
accessionIdentifier | Σ | 0..1 | Identifier | Identifier assigned by the lab
status | ?!S Σ | 0..1 | code | available | unavailable | unsatisfactory | entered-in-error Binding: SpecimenStatus (required): Codes providing the status/availability of a specimen.
type | O Σ | 0..1 | CodeableConcept | Kind of material that forms the specimen Binding: Materiál vzorků (preferred)
Obligations | Actor
SHOULD:able-to-populate | Creator_L2
SHALL:able-to-populate | Creator_L3
SHOULD:display | Consumer_L2
SHALL:display | Consumer_L3
subject | SO Σ | 0..1 | Reference(Group | Device: Performer/Observer (CZ core) | Medical Device (CZ core) | Substance | Location (CZ core) | Patient (CZ core)) | In the initial iteration of the Czech interoperability project, this is CZ_PatientCore.
Obligations | Actor
SHOULD:able-to-populate | Creator_L2
SHALL:able-to-populate | Creator_L3
SHOULD:display | Consumer_L2
SHALL:display | Consumer_L3
receivedTime | SO Σ | 0..1 | dateTime | The time when specimen was received for processing
Obligations | Actor
SHOULD:able-to-populate | Creator_L2
SHALL:able-to-populate | Creator_L3
SHOULD:display | Consumer_L2
SHALL:display | Consumer_L3
parent | S | 0..* | Reference(Specimen (CZ Core)) | Specimen from which this specimen originated
request | S | 0..* | Reference(ServiceRequest) | Why the specimen was collected
collection |  | 0..1 | BackboneElement | Collection details
id |  | 0..1 | string | Unique id for inter-element referencing
Slices for extension |  | 0..* | Extension | Extension Slice: Unordered, Open by value:url
extension:bodySite |  | 0..1 | (Complex) | Target anatomic location or structure URL: http://hl7.org/fhir/StructureDefinition/bodySite
id |  | 0..1 | string | Unique id for inter-element referencing
extension |  | 0..0 |  | Extension Slice: Unordered, Open by value:url
url |  | 1..1 | uri | "http://hl7.org/fhir/StructureDefinition/bodySite"
value[x] |  | 1..1 | Reference(Body Structure (CZ core)) | Value of extension
modifierExtension | ?!Σ | 0..* | Extension | Extensions that cannot be ignored even if unrecognized
collector | Σ | 0..1 | Reference(Practitioner (CZ core) | Practitioner Role (CZ core)) | Who collected the specimen
Slices for collected[x] | Σ | 0..1 |  | Collection time Slice: Unordered, Open by type:$this
collectedDateTime |  |  | dateTime |
collectedPeriod |  |  | Period |
collected[x]:collectedDateTime | O Σ | 0..1 | dateTime | Collection time
Obligations | Actor
SHOULD:able-to-populate | Creator_L2
SHALL:able-to-populate | Creator_L3
SHOULD:display | Consumer_L2
SHALL:display | Consumer_L3
duration | Σ | 0..1 | Duration | How long it took to collect specimen
quantity |  | 0..1 | SimpleQuantity(4.0.1) | The quantity of specimen collected
method | O | 0..1 | CodeableConcept | Technique used to perform collection Binding: FHIRSpecimenCollectionMethod (example): The technique that is used to perform the procedure.
Obligations | Actor
SHOULD:able-to-populate | Creator_L2
SHALL:able-to-populate | Creator_L3
SHOULD:display | Consumer_L2
SHALL:display | Consumer_L3
bodySite | O | 0..1 | CodeableConcept | Anatomical collection site Binding: SNOMEDCTBodyStructures (preferred)
Obligations | Actor
SHOULD:able-to-populate | Creator_L2
SHALL:able-to-populate | Creator_L3
SHOULD:display | Consumer_L2
SHALL:display | Consumer_L3
fastingStatus[x] | Σ | 0..1 |  | Whether or how long patient abstained from food and/or drink Binding: Hl7VSRelevantClincialInformation (3.0.0) (extensible): Codes describing the fasting status of the patient.
fastingStatusCodeableConcept |  |  | CodeableConcept |
fastingStatusDuration |  |  | Duration |
processing |  | 0..* | BackboneElement | Processing and processing step details to include when not implicit from specimen.
id |  | 0..1 | string | Unique id for inter-element referencing
extension |  | 0..* | Extension | Additional content defined by implementations
modifierExtension | ?!Σ | 0..* | Extension | Extensions that cannot be ignored even if unrecognized
description |  | 0..1 | string | Textual description of procedure
procedure |  | 0..1 | CodeableConcept | Indicates the treatment step applied to the specimen Binding: SpecimenProcessingProcedure (example): Type indicating the technique used to process the specimen.
additive |  | 0..* | Reference(Substance | Substance: Specimen Additive Substance (CZ core)) | Material used in the processing step
time[x] |  | 0..1 |  | Date and time of specimen processing
timeDateTime |  |  | dateTime |
timePeriod |  |  | Period |
container |  | 0..* | BackboneElement | Direct container of specimen (tube/slide, etc.)
id |  | 0..1 | string | Unique id for inter-element referencing
Slices for extension |  | 0..* | Extension | Extension Slice: Unordered, Open by value:url
extension:device |  | 0..1 | (Complex) | R5: Device resource for the container (new) URL: http://hl7.org/fhir/5.0/StructureDefinition/extension-Specimen.container.device Constraints: ext-1
id |  | 0..1 | string | Unique id for inter-element referencing
extension |  | 0..0 |  | Extension Slice: Unordered, Open by value:url Constraints: ext-1
url |  | 1..1 | uri | "http://hl7.org/fhir/5.0/StructureDefinition/extension-Specimen.container.device"
value[x] |  | 1..1 | Reference(Medical Device (CZ core)) | Device resource for the container
modifierExtension | ?!Σ | 0..* | Extension | Extensions that cannot be ignored even if unrecognized
identifier | Σ | 0..* | Identifier | Id for the container
description |  | 0..1 | string | Textual description of the container
type |  | 0..1 | CodeableConcept | Kind of container directly associated with specimen Binding: Specimen Container (preferred)
capacity |  | 0..1 | SimpleQuantity(4.0.1) | Container volume or size
specimenQuantity |  | 0..1 | SimpleQuantity(4.0.1) | Quantity of specimen within container
condition | S Σ | 0..* | CodeableConcept | State of the specimen Binding: Hl7VSSpecimenCondition (3.0.0) (extensible): Codes describing the state of the specimen.
note | S | 0..* | Annotation | Comments
Documentation for this format

Name | Creator_L3 | Creator_L2 | Consumer_L2 | Consumer_L3
--- | --- | --- | --- | ---
Specimen |  |  |  |
identifier | SHALL:able-to-populate | SHOULD:able-to-populate | SHOULD:display | SHALL:display
type | SHALL:able-to-populate | SHOULD:able-to-populate | SHOULD:display | SHALL:display
subject | SHALL:able-to-populate | SHOULD:able-to-populate | SHOULD:display | SHALL:display
receivedTime | SHALL:able-to-populate | SHOULD:able-to-populate | SHOULD:display | SHALL:display
collection |  |  |  |
Slices for extension |  |  |  |
Slices for collected[x] |  |  |  |
collected[x]:collectedDateTime | SHALL:able-to-populate | SHOULD:able-to-populate | SHOULD:display | SHALL:display
method | SHALL:able-to-populate | SHOULD:able-to-populate | SHOULD:display | SHALL:display
bodySite | SHALL:able-to-populate | SHOULD:able-to-populate | SHOULD:display | SHALL:display
Documentation for this format

#### Terminology Bindings

Path | Status | Usage | ValueSet | Version | Source
Specimen.language | Base | preferred | Common Languages | 📍4.0.1 | FHIR Std.
Specimen.status | Base | required | SpecimenStatus | 📍4.0.1 | FHIR Std.
Specimen.type | Base | preferred | Materiál vzorků | 📦0.3.0 | HL7 Czech Terminology Implementation Guide vnull
Specimen.collection.​method | Base | example | FHIR Specimen Collection Method | 📍4.0.1 | FHIR Std.
Specimen.collection.​bodySite | Base | preferred | SNOMED CT Body Structures | 📦4.0.1 | FHIR Std.
Specimen.collection.​fastingStatus[x] | Base | extensible | hl7VS-relevantClincialInformation | 📍3.0.0 | THO v7.1
Specimen.processing.​procedure | Base | example | Specimen processing procedure | 📍4.0.1 | FHIR Std.
Specimen.container.type | Base | preferred | Specimen Container | 📦0.3.0 | HL7 Czech Terminology Implementation Guide vnull
Specimen.condition | Base | extensible | hl7VS-specimenCondition | 📍3.0.0 | THO v7.1

#### Constraints

Id | Grade | Path(s) | Description | Expression
dom-2 | error | Specimen | If the resource is contained in another resource, it SHALL NOT contain nested Resources | `contained.contained.empty()`
dom-3 | error | Specimen | If the resource is contained in another resource, it SHALL be referred to from elsewhere in the resource or SHALL refer to the containing resource | `contained.where((('#'+id in (%resource.descendants().reference | %resource.descendants().as(canonical) | %resource.descendants().as(uri) | %resource.descendants().as(url))) or descendants().where(reference = '#').exists() or descendants().where(as(canonical) = '#').exists() or descendants().where(as(canonical) = '#').exists()).not()).trace('unmatched', id).empty()`
dom-4 | error | Specimen | If a resource is contained in another resource, it SHALL NOT have a meta.versionId or a meta.lastUpdated | `contained.meta.versionId.empty() and contained.meta.lastUpdated.empty()`
dom-5 | error | Specimen | If a resource is contained in another resource, it SHALL NOT have a security label | `contained.meta.security.empty()`
dom-6 | best practice | Specimen | A resource should have narrative for robust management | `text.`div`.exists()`
ele-1 | error | **ALL** elements | All FHIR elements must have a @value or children | `hasValue() or (children().count() > id.count())`
ext-1 | error | **ALL** extensions | Must have either extensions or value[x], not both | `extension.exists() != value.exists()`

Name | Creator_L3 | Creator_L2 | Consumer_L2 | Consumer_L3
--- | --- | --- | --- | ---
Specimen |  |  |  |
identifier | SHALL:able-to-populate | SHOULD:able-to-populate | SHOULD:display | SHALL:display
type | SHALL:able-to-populate | SHOULD:able-to-populate | SHOULD:display | SHALL:display
subject | SHALL:able-to-populate | SHOULD:able-to-populate | SHOULD:display | SHALL:display
receivedTime | SHALL:able-to-populate | SHOULD:able-to-populate | SHOULD:display | SHALL:display
collection |  |  |  |
Slices for extension |  |  |  |
Slices for collected[x] |  |  |  |
collected[x]:collectedDateTime | SHALL:able-to-populate | SHOULD:able-to-populate | SHOULD:display | SHALL:display
method | SHALL:able-to-populate | SHOULD:able-to-populate | SHOULD:display | SHALL:display
bodySite | SHALL:able-to-populate | SHOULD:able-to-populate | SHOULD:display | SHALL:display
Documentation for this format

Summary

Slices

This structure defines the following Slices:

- The element 1 is sliced based on the value of Specimen.collection.collected[x]

Key Elements View

Name | Flags | Card. | Type | Description & Constraints Filter: Bindings Constraints Obligations
--- | --- | --- | --- | ---
Specimen |  | 0..* | CZ_Specimen | Czech Specimen
implicitRules | ?!Σ | 0..1 | uri | A set of rules under which this content was created
modifierExtension | ?! | 0..* | Extension | Extensions that cannot be ignored
identifier | SO Σ | 0..* | Identifier | External Identifier
Obligations | Actor
SHOULD:able-to-populate | Creator_L2
SHALL:able-to-populate | Creator_L3
SHOULD:display | Consumer_L2
SHALL:display | Consumer_L3
status | ?!S Σ | 0..1 | code | available | unavailable | unsatisfactory | entered-in-error Binding: SpecimenStatus (required): Codes providing the status/availability of a specimen.
type | O Σ | 0..1 | CodeableConcept | Kind of material that forms the specimen Binding: Materiál vzorků (preferred)
Obligations | Actor
SHOULD:able-to-populate | Creator_L2
SHALL:able-to-populate | Creator_L3
SHOULD:display | Consumer_L2
SHALL:display | Consumer_L3
subject | SO Σ | 0..1 | Reference(Group | Device: Performer/Observer (CZ core) | Medical Device (CZ core) | Substance | Location (CZ core) | Patient (CZ core)) | In the initial iteration of the Czech interoperability project, this is CZ_PatientCore.
Obligations | Actor
SHOULD:able-to-populate | Creator_L2
SHALL:able-to-populate | Creator_L3
SHOULD:display | Consumer_L2
SHALL:display | Consumer_L3
receivedTime | SO Σ | 0..1 | dateTime | The time when specimen was received for processing
Obligations | Actor
SHOULD:able-to-populate | Creator_L2
SHALL:able-to-populate | Creator_L3
SHOULD:display | Consumer_L2
SHALL:display | Consumer_L3
parent | S | 0..* | Reference(Specimen (CZ Core)) | Specimen from which this specimen originated
request | S | 0..* | Reference(ServiceRequest) | Why the specimen was collected
condition | S Σ | 0..* | CodeableConcept | State of the specimen Binding: Hl7VSSpecimenCondition (3.0.0) (extensible): Codes describing the state of the specimen.
note | S | 0..* | Annotation | Comments
Documentation for this format

Name | Creator_L3 | Creator_L2 | Consumer_L2 | Consumer_L3
--- | --- | --- | --- | ---
Specimen |  |  |  |
identifier | SHALL:able-to-populate | SHOULD:able-to-populate | SHOULD:display | SHALL:display
type | SHALL:able-to-populate | SHOULD:able-to-populate | SHOULD:display | SHALL:display
subject | SHALL:able-to-populate | SHOULD:able-to-populate | SHOULD:display | SHALL:display
receivedTime | SHALL:able-to-populate | SHOULD:able-to-populate | SHOULD:display | SHALL:display
Documentation for this format

#### Terminology Bindings

Path | Status | Usage | ValueSet | Version | Source
Specimen.status | Base | required | SpecimenStatus | 📍4.0.1 | FHIR Std.
Specimen.type | Base | preferred | Materiál vzorků | 📦0.3.0 | HL7 Czech Terminology Implementation Guide vnull
Specimen.condition | Base | extensible | hl7VS-specimenCondition | 📍3.0.0 | THO v7.1

#### Constraints

Id | Grade | Path(s) | Description | Expression
dom-2 | error | Specimen | If the resource is contained in another resource, it SHALL NOT contain nested Resources | `contained.contained.empty()`
dom-3 | error | Specimen | If the resource is contained in another resource, it SHALL be referred to from elsewhere in the resource or SHALL refer to the containing resource | `contained.where((('#'+id in (%resource.descendants().reference | %resource.descendants().as(canonical) | %resource.descendants().as(uri) | %resource.descendants().as(url))) or descendants().where(reference = '#').exists() or descendants().where(as(canonical) = '#').exists() or descendants().where(as(canonical) = '#').exists()).not()).trace('unmatched', id).empty()`
dom-4 | error | Specimen | If a resource is contained in another resource, it SHALL NOT have a meta.versionId or a meta.lastUpdated | `contained.meta.versionId.empty() and contained.meta.lastUpdated.empty()`
dom-5 | error | Specimen | If a resource is contained in another resource, it SHALL NOT have a security label | `contained.meta.security.empty()`
dom-6 | best practice | Specimen | A resource should have narrative for robust management | `text.`div`.exists()`
ele-1 | error | **ALL** elements | All FHIR elements must have a @value or children | `hasValue() or (children().count() > id.count())`
ext-1 | error | **ALL** extensions | Must have either extensions or value[x], not both | `extension.exists() != value.exists()`

Differential View

Name | Flags | Card. | Type | Description & Constraints Filter: Bindings Constraints Obligations
--- | --- | --- | --- | ---
Specimen |  | 0..* | CZ_Specimen | Czech Specimen
identifier | O | 0..* | Identifier | External Identifier
Obligations | Actor
SHOULD:able-to-populate | Creator_L2
SHALL:able-to-populate | Creator_L3
SHOULD:display | Consumer_L2
SHALL:display | Consumer_L3
type | O | 0..1 | CodeableConcept | Kind of material that forms the specimen
Obligations | Actor
SHOULD:able-to-populate | Creator_L2
SHALL:able-to-populate | Creator_L3
SHOULD:display | Consumer_L2
SHALL:display | Consumer_L3
subject | O | 0..1 | Reference(Group | Device: Performer/Observer (CZ core) | Medical Device (CZ core) | Substance | Location (CZ core) | Patient (CZ core)) | In the initial iteration of the Czech interoperability project, this is CZ_PatientCore.
Obligations | Actor
SHOULD:able-to-populate | Creator_L2
SHALL:able-to-populate | Creator_L3
SHOULD:display | Consumer_L2
SHALL:display | Consumer_L3
receivedTime | O | 0..1 | dateTime | The time when specimen was received for processing
Obligations | Actor
SHOULD:able-to-populate | Creator_L2
SHALL:able-to-populate | Creator_L3
SHOULD:display | Consumer_L2
SHALL:display | Consumer_L3
collection |  |  |  |
Slices for collected[x] |  | 0..1 | dateTime, Period | Collection time Slice: Unordered, Open by type:$this
collected[x]:collectedDateTime | O | 0..1 | dateTime | Collection time
Obligations | Actor
SHOULD:able-to-populate | Creator_L2
SHALL:able-to-populate | Creator_L3
SHOULD:display | Consumer_L2
SHALL:display | Consumer_L3
method | O | 0..1 | CodeableConcept | Technique used to perform collection
Obligations | Actor
SHOULD:able-to-populate | Creator_L2
SHALL:able-to-populate | Creator_L3
SHOULD:display | Consumer_L2
SHALL:display | Consumer_L3
bodySite | O | 0..1 | CodeableConcept | Anatomical collection site
Obligations | Actor
SHOULD:able-to-populate | Creator_L2
SHALL:able-to-populate | Creator_L3
SHOULD:display | Consumer_L2
SHALL:display | Consumer_L3
Documentation for this format

Name | Creator_L3 | Creator_L2 | Consumer_L2 | Consumer_L3
--- | --- | --- | --- | ---
Specimen |  |  |  |
identifier | SHALL:able-to-populate | SHOULD:able-to-populate | SHOULD:display | SHALL:display
type | SHALL:able-to-populate | SHOULD:able-to-populate | SHOULD:display | SHALL:display
subject | SHALL:able-to-populate | SHOULD:able-to-populate | SHOULD:display | SHALL:display
receivedTime | SHALL:able-to-populate | SHOULD:able-to-populate | SHOULD:display | SHALL:display
collection |  |  |  |
Slices for collected[x] |  |  |  |
collected[x]:collectedDateTime | SHALL:able-to-populate | SHOULD:able-to-populate | SHOULD:display | SHALL:display
method | SHALL:able-to-populate | SHOULD:able-to-populate | SHOULD:display | SHALL:display
bodySite | SHALL:able-to-populate | SHOULD:able-to-populate | SHOULD:display | SHALL:display
Documentation for this format

Snapshot ViewView

Name | Flags | Card. | Type | Description & Constraints Filter: Bindings Constraints Obligations
--- | --- | --- | --- | ---
Specimen |  | 0..* | CZ_Specimen | Czech Specimen
id | Σ | 0..1 | id | Logical id of this artifact
meta | Σ | 0..1 | Meta | Metadata about the resource
implicitRules | ?!Σ | 0..1 | uri | A set of rules under which this content was created
language |  | 0..1 | code | Language of the resource content Binding: CommonLanguages (preferred): A human language.
Additional Bindings | Purpose
AllLanguages | Max Binding
text |  | 0..1 | Narrative | Text summary of the resource, for human interpretation This profile does not constrain the narrative in regard to content, language, or traceability to data elements
contained |  | 0..* | Resource | Contained, inline Resources
extension |  | 0..* | Extension | Additional content defined by implementations
modifierExtension | ?! | 0..* | Extension | Extensions that cannot be ignored
identifier | SO Σ | 0..* | Identifier | External Identifier
Obligations | Actor
SHOULD:able-to-populate | Creator_L2
SHALL:able-to-populate | Creator_L3
SHOULD:display | Consumer_L2
SHALL:display | Consumer_L3
accessionIdentifier | Σ | 0..1 | Identifier | Identifier assigned by the lab
status | ?!S Σ | 0..1 | code | available | unavailable | unsatisfactory | entered-in-error Binding: SpecimenStatus (required): Codes providing the status/availability of a specimen.
type | O Σ | 0..1 | CodeableConcept | Kind of material that forms the specimen Binding: Materiál vzorků (preferred)
Obligations | Actor
SHOULD:able-to-populate | Creator_L2
SHALL:able-to-populate | Creator_L3
SHOULD:display | Consumer_L2
SHALL:display | Consumer_L3
subject | SO Σ | 0..1 | Reference(Group | Device: Performer/Observer (CZ core) | Medical Device (CZ core) | Substance | Location (CZ core) | Patient (CZ core)) | In the initial iteration of the Czech interoperability project, this is CZ_PatientCore.
Obligations | Actor
SHOULD:able-to-populate | Creator_L2
SHALL:able-to-populate | Creator_L3
SHOULD:display | Consumer_L2
SHALL:display | Consumer_L3
receivedTime | SO Σ | 0..1 | dateTime | The time when specimen was received for processing
Obligations | Actor
SHOULD:able-to-populate | Creator_L2
SHALL:able-to-populate | Creator_L3
SHOULD:display | Consumer_L2
SHALL:display | Consumer_L3
parent | S | 0..* | Reference(Specimen (CZ Core)) | Specimen from which this specimen originated
request | S | 0..* | Reference(ServiceRequest) | Why the specimen was collected
collection |  | 0..1 | BackboneElement | Collection details
id |  | 0..1 | string | Unique id for inter-element referencing
Slices for extension |  | 0..* | Extension | Extension Slice: Unordered, Open by value:url
extension:bodySite |  | 0..1 | (Complex) | Target anatomic location or structure URL: http://hl7.org/fhir/StructureDefinition/bodySite
id |  | 0..1 | string | Unique id for inter-element referencing
extension |  | 0..0 |  | Extension Slice: Unordered, Open by value:url
url |  | 1..1 | uri | "http://hl7.org/fhir/StructureDefinition/bodySite"
value[x] |  | 1..1 | Reference(Body Structure (CZ core)) | Value of extension
modifierExtension | ?!Σ | 0..* | Extension | Extensions that cannot be ignored even if unrecognized
collector | Σ | 0..1 | Reference(Practitioner (CZ core) | Practitioner Role (CZ core)) | Who collected the specimen
Slices for collected[x] | Σ | 0..1 |  | Collection time Slice: Unordered, Open by type:$this
collectedDateTime |  |  | dateTime |
collectedPeriod |  |  | Period |
collected[x]:collectedDateTime | O Σ | 0..1 | dateTime | Collection time
Obligations | Actor
SHOULD:able-to-populate | Creator_L2
SHALL:able-to-populate | Creator_L3
SHOULD:display | Consumer_L2
SHALL:display | Consumer_L3
duration | Σ | 0..1 | Duration | How long it took to collect specimen
quantity |  | 0..1 | SimpleQuantity(4.0.1) | The quantity of specimen collected
method | O | 0..1 | CodeableConcept | Technique used to perform collection Binding: FHIRSpecimenCollectionMethod (example): The technique that is used to perform the procedure.
Obligations | Actor
SHOULD:able-to-populate | Creator_L2
SHALL:able-to-populate | Creator_L3
SHOULD:display | Consumer_L2
SHALL:display | Consumer_L3
bodySite | O | 0..1 | CodeableConcept | Anatomical collection site Binding: SNOMEDCTBodyStructures (preferred)
Obligations | Actor
SHOULD:able-to-populate | Creator_L2
SHALL:able-to-populate | Creator_L3
SHOULD:display | Consumer_L2
SHALL:display | Consumer_L3
fastingStatus[x] | Σ | 0..1 |  | Whether or how long patient abstained from food and/or drink Binding: Hl7VSRelevantClincialInformation (3.0.0) (extensible): Codes describing the fasting status of the patient.
fastingStatusCodeableConcept |  |  | CodeableConcept |
fastingStatusDuration |  |  | Duration |
processing |  | 0..* | BackboneElement | Processing and processing step details to include when not implicit from specimen.
id |  | 0..1 | string | Unique id for inter-element referencing
extension |  | 0..* | Extension | Additional content defined by implementations
modifierExtension | ?!Σ | 0..* | Extension | Extensions that cannot be ignored even if unrecognized
description |  | 0..1 | string | Textual description of procedure
procedure |  | 0..1 | CodeableConcept | Indicates the treatment step applied to the specimen Binding: SpecimenProcessingProcedure (example): Type indicating the technique used to process the specimen.
additive |  | 0..* | Reference(Substance | Substance: Specimen Additive Substance (CZ core)) | Material used in the processing step
time[x] |  | 0..1 |  | Date and time of specimen processing
timeDateTime |  |  | dateTime |
timePeriod |  |  | Period |
container |  | 0..* | BackboneElement | Direct container of specimen (tube/slide, etc.)
id |  | 0..1 | string | Unique id for inter-element referencing
Slices for extension |  | 0..* | Extension | Extension Slice: Unordered, Open by value:url
extension:device |  | 0..1 | (Complex) | R5: Device resource for the container (new) URL: http://hl7.org/fhir/5.0/StructureDefinition/extension-Specimen.container.device Constraints: ext-1
id |  | 0..1 | string | Unique id for inter-element referencing
extension |  | 0..0 |  | Extension Slice: Unordered, Open by value:url Constraints: ext-1
url |  | 1..1 | uri | "http://hl7.org/fhir/5.0/StructureDefinition/extension-Specimen.container.device"
value[x] |  | 1..1 | Reference(Medical Device (CZ core)) | Device resource for the container
modifierExtension | ?!Σ | 0..* | Extension | Extensions that cannot be ignored even if unrecognized
identifier | Σ | 0..* | Identifier | Id for the container
description |  | 0..1 | string | Textual description of the container
type |  | 0..1 | CodeableConcept | Kind of container directly associated with specimen Binding: Specimen Container (preferred)
capacity |  | 0..1 | SimpleQuantity(4.0.1) | Container volume or size
specimenQuantity |  | 0..1 | SimpleQuantity(4.0.1) | Quantity of specimen within container
condition | S Σ | 0..* | CodeableConcept | State of the specimen Binding: Hl7VSSpecimenCondition (3.0.0) (extensible): Codes describing the state of the specimen.
note | S | 0..* | Annotation | Comments
Documentation for this format

Name | Creator_L3 | Creator_L2 | Consumer_L2 | Consumer_L3
--- | --- | --- | --- | ---
Specimen |  |  |  |
identifier | SHALL:able-to-populate | SHOULD:able-to-populate | SHOULD:display | SHALL:display
type | SHALL:able-to-populate | SHOULD:able-to-populate | SHOULD:display | SHALL:display
subject | SHALL:able-to-populate | SHOULD:able-to-populate | SHOULD:display | SHALL:display
receivedTime | SHALL:able-to-populate | SHOULD:able-to-populate | SHOULD:display | SHALL:display
collection |  |  |  |
Slices for extension |  |  |  |
Slices for collected[x] |  |  |  |
collected[x]:collectedDateTime | SHALL:able-to-populate | SHOULD:able-to-populate | SHOULD:display | SHALL:display
method | SHALL:able-to-populate | SHOULD:able-to-populate | SHOULD:display | SHALL:display
bodySite | SHALL:able-to-populate | SHOULD:able-to-populate | SHOULD:display | SHALL:display
Documentation for this format

#### Terminology Bindings

Path | Status | Usage | ValueSet | Version | Source
Specimen.language | Base | preferred | Common Languages | 📍4.0.1 | FHIR Std.
Specimen.status | Base | required | SpecimenStatus | 📍4.0.1 | FHIR Std.
Specimen.type | Base | preferred | Materiál vzorků | 📦0.3.0 | HL7 Czech Terminology Implementation Guide vnull
Specimen.collection.​method | Base | example | FHIR Specimen Collection Method | 📍4.0.1 | FHIR Std.
Specimen.collection.​bodySite | Base | preferred | SNOMED CT Body Structures | 📦4.0.1 | FHIR Std.
Specimen.collection.​fastingStatus[x] | Base | extensible | hl7VS-relevantClincialInformation | 📍3.0.0 | THO v7.1
Specimen.processing.​procedure | Base | example | Specimen processing procedure | 📍4.0.1 | FHIR Std.
Specimen.container.type | Base | preferred | Specimen Container | 📦0.3.0 | HL7 Czech Terminology Implementation Guide vnull
Specimen.condition | Base | extensible | hl7VS-specimenCondition | 📍3.0.0 | THO v7.1

#### Constraints

Id | Grade | Path(s) | Description | Expression
dom-2 | error | Specimen | If the resource is contained in another resource, it SHALL NOT contain nested Resources | `contained.contained.empty()`
dom-3 | error | Specimen | If the resource is contained in another resource, it SHALL be referred to from elsewhere in the resource or SHALL refer to the containing resource | `contained.where((('#'+id in (%resource.descendants().reference | %resource.descendants().as(canonical) | %resource.descendants().as(uri) | %resource.descendants().as(url))) or descendants().where(reference = '#').exists() or descendants().where(as(canonical) = '#').exists() or descendants().where(as(canonical) = '#').exists()).not()).trace('unmatched', id).empty()`
dom-4 | error | Specimen | If a resource is contained in another resource, it SHALL NOT have a meta.versionId or a meta.lastUpdated | `contained.meta.versionId.empty() and contained.meta.lastUpdated.empty()`
dom-5 | error | Specimen | If a resource is contained in another resource, it SHALL NOT have a security label | `contained.meta.security.empty()`
dom-6 | best practice | Specimen | A resource should have narrative for robust management | `text.`div`.exists()`
ele-1 | error | **ALL** elements | All FHIR elements must have a @value or children | `hasValue() or (children().count() > id.count())`
ext-1 | error | **ALL** extensions | Must have either extensions or value[x], not both | `extension.exists() != value.exists()`

Name | Creator_L3 | Creator_L2 | Consumer_L2 | Consumer_L3
--- | --- | --- | --- | ---
Specimen |  |  |  |
identifier | SHALL:able-to-populate | SHOULD:able-to-populate | SHOULD:display | SHALL:display
type | SHALL:able-to-populate | SHOULD:able-to-populate | SHOULD:display | SHALL:display
subject | SHALL:able-to-populate | SHOULD:able-to-populate | SHOULD:display | SHALL:display
receivedTime | SHALL:able-to-populate | SHOULD:able-to-populate | SHOULD:display | SHALL:display
collection |  |  |  |
Slices for extension |  |  |  |
Slices for collected[x] |  |  |  |
collected[x]:collectedDateTime | SHALL:able-to-populate | SHOULD:able-to-populate | SHOULD:display | SHALL:display
method | SHALL:able-to-populate | SHOULD:able-to-populate | SHOULD:display | SHALL:display
bodySite | SHALL:able-to-populate | SHOULD:able-to-populate | SHOULD:display | SHALL:display
Documentation for this format

Summary

Slices

This structure defines the following Slices:

- The element 1 is sliced based on the value of Specimen.collection.collected[x]

Other representations of profile: CSV, Excel, Schematron