HL7 Czech Imaging Report IG
0.1.0-ballot - ci-build CZ

HL7 Czech Imaging Report IG, published by HL7 Czech Republic. This guide is not an authorized publication; it is the continuous build for version 0.1.0-ballot built by the FHIR (HL7® FHIR® Standard) CI Build. This version is based on the current content of https://github.com/HL7-cz/img/ and changes regularly. See the Directory of published versions

## Logical Model: A.2.3 - Sample information - JSON Profile

Draft as of 2026-05-26

JSON representation of the SpecimenInformation logical model.

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    {
      "resourceType" : "StructureDefinition",
      "id" : "SpecimenInformation",
      "language" : "en",
      "text" : {
        "status" : "extensions"
      },
      "url" : "https://hl7.cz/fhir/img/StructureDefinition/SpecimenInformation",
      "version" : "0.1.0-ballot",
      "name" : "LogEnSpecimenInformationCz",
      "title" : "A.2.3 - Sample information",
      "status" : "draft",
      "date" : "2026-05-26T08:31:12+00:00",
      "publisher" : "HL7 Czech Republic",
      "contact" : [
        {
          "name" : "HL7 Czech Republic",
          "telecom" : [
            {
              "system" : "url",
              "value" : "https://www.hl7.cz/"
            }
          ]
        }
      ],
      "description" : "Imaging Report - Imaging Report sample information - A.2.3 \r\nInformation about the sample if the subject of the examination is a sample.",
      "jurisdiction" : [
        {
          "coding" : [
            {
              "system" : "urn:iso:std:iso:3166",
              "code" : "CZ",
              "display" : "Czechia"
            }
          ]
        }
      ],
      "fhirVersion" : "4.0.1",
      "kind" : "logical",
      "abstract" : false,
      "type" : "https://hl7.cz/fhir/img/StructureDefinition/SpecimenInformation",
      "baseDefinition" : "http://hl7.org/fhir/StructureDefinition/Base",
      "derivation" : "specialization",
      "snapshot" : {
        "extension" : [
          {
            "url" : "http://hl7.org/fhir/tools/StructureDefinition/snapshot-base-version",
            "valueString" : "4.0.1"
          }
        ],
        "element" : [
          {
            "id" : "SpecimenInformation",
            "path" : "SpecimenInformation",
            "short" : "A.2.3 - Sample information",
            "definition" : "Imaging Report - Imaging Report sample information - A.2.3 \r\nInformation about the sample if the subject of the examination is a sample.",
            "min" : 0,
            "max" : "*",
            "base" : {
              "path" : "Base",
              "min" : 0,
              "max" : "*"
            },
            "isModifier" : false
          },
          {
            "id" : "SpecimenInformation.identifier",
            "path" : "SpecimenInformation.identifier",
            "short" : "A.2.3.1 - Specimen identifier",
            "definition" : "Sample identifier that is unique within a defined scope, e.g., identifier assigned by an ordering system, collection site, receiving site, etc.",
            "min" : 1,
            "max" : "*",
            "base" : {
              "path" : "SpecimenInformation.identifier",
              "min" : 1,
              "max" : "*"
            },
            "type" : [
              {
                "code" : "Identifier"
              }
            ]
          },
          {
            "id" : "SpecimenInformation.species",
            "path" : "SpecimenInformation.species",
            "short" : "A.2.3.2 - Type of species",
            "definition" : "Biological species refers to samples taken from non-human subjects. - Preferred system(s): SNOMED CT [TypeOfSpeciesCodelist]",
            "min" : 0,
            "max" : "1",
            "base" : {
              "path" : "SpecimenInformation.species",
              "min" : 0,
              "max" : "1"
            },
            "type" : [
              {
                "code" : "CodeableConcept"
              }
            ]
          },
          {
            "id" : "SpecimenInformation.material",
            "path" : "SpecimenInformation.material",
            "short" : "A.2.3.3 - Material",
            "definition" : "Material of the collected and examined sample. - Preferred system(s): SNOMED CT [SpecimenMaterialCodelist]",
            "min" : 1,
            "max" : "1",
            "base" : {
              "path" : "SpecimenInformation.material",
              "min" : 1,
              "max" : "1"
            },
            "type" : [
              {
                "code" : "CodeableConcept"
              }
            ]
          },
          {
            "id" : "SpecimenInformation.collectionDate",
            "path" : "SpecimenInformation.collectionDate",
            "short" : "A.2.3.4 - Collection period",
            "definition" : "Date and time or duration of sample collection. - Preferred system(s): ISO 8601",
            "min" : 0,
            "max" : "1",
            "base" : {
              "path" : "SpecimenInformation.collectionDate",
              "min" : 0,
              "max" : "1"
            },
            "type" : [
              {
                "code" : "dateTime"
              }
            ]
          },
          {
            "id" : "SpecimenInformation.anatomicLocation",
            "path" : "SpecimenInformation.anatomicLocation",
            "short" : "A.2.3.5 - Anatomical location",
            "definition" : "Anatomical location (position within the body, laterality) from which the material is taken, such as 'left elbow'. - Preferred system(s): SNOMED CT [BodyLacation|LocationICT-O-3|Laterality Codelists]",
            "min" : 0,
            "max" : "1",
            "base" : {
              "path" : "SpecimenInformation.anatomicLocation",
              "min" : 0,
              "max" : "1"
            },
            "type" : [
              {
                "code" : "CodeableConcept"
              }
            ]
          },
          {
            "id" : "SpecimenInformation.morphology",
            "path" : "SpecimenInformation.morphology",
            "short" : "A.2.3.6 - Morphology",
            "definition" : "Morphological abnormalities of the anatomical location from which the material is taken, such as 'lesion or ulcer'. - Preferred system(s): SNOMED CT [MorfologyCodelist]",
            "min" : 0,
            "max" : "1",
            "base" : {
              "path" : "SpecimenInformation.morphology",
              "min" : 0,
              "max" : "1"
            },
            "type" : [
              {
                "code" : "CodeableConcept"
              }
            ]
          },
          {
            "id" : "SpecimenInformation.sourceDevice",
            "path" : "SpecimenInformation.sourceDevice",
            "short" : "A.2.3.7 - Source Device",
            "definition" : "In case the material is not directly taken from the patient but comes from an object related to the patient, such as a 'catheter'.\n - Preferred system(s): SNOMED CT\n - Preferred system(s): EMDN",
            "min" : 0,
            "max" : "1",
            "base" : {
              "path" : "SpecimenInformation.sourceDevice",
              "min" : 0,
              "max" : "1"
            },
            "type" : [
              {
                "code" : "CodeableConcept"
              }
            ]
          },
          {
            "id" : "SpecimenInformation.procedure",
            "path" : "SpecimenInformation.procedure",
            "short" : "A.2.3.8 - Collection procedure/method",
            "definition" : "Method, manner of sample collection, if relevant to the results. - Preferred system(s): SNOMED CT [CollectionMethodCodelist]",
            "min" : 0,
            "max" : "1",
            "base" : {
              "path" : "SpecimenInformation.procedure",
              "min" : 0,
              "max" : "1"
            },
            "type" : [
              {
                "code" : "CodeableConcept"
              }
            ]
          },
          {
            "id" : "SpecimenInformation.receivedDateTime",
            "path" : "SpecimenInformation.receivedDateTime",
            "short" : "A.2.3.9 - Received date",
            "definition" : "Date and time the sample is received by the facility performing the examination. - Preferred system(s): ISO 8601",
            "min" : 0,
            "max" : "1",
            "base" : {
              "path" : "SpecimenInformation.receivedDateTime",
              "min" : 0,
              "max" : "1"
            },
            "type" : [
              {
                "code" : "dateTime"
              }
            ]
          }
        ]
      },
      "differential" : {
        "element" : [
          {
            "id" : "SpecimenInformation",
            "path" : "SpecimenInformation",
            "short" : "A.2.3 - Sample information",
            "definition" : "Imaging Report - Imaging Report sample information - A.2.3 \r\nInformation about the sample if the subject of the examination is a sample."
          },
          {
            "id" : "SpecimenInformation.identifier",
            "path" : "SpecimenInformation.identifier",
            "short" : "A.2.3.1 - Specimen identifier",
            "definition" : "Sample identifier that is unique within a defined scope, e.g., identifier assigned by an ordering system, collection site, receiving site, etc.",
            "min" : 1,
            "max" : "*",
            "type" : [
              {
                "code" : "Identifier"
              }
            ]
          },
          {
            "id" : "SpecimenInformation.species",
            "path" : "SpecimenInformation.species",
            "short" : "A.2.3.2 - Type of species",
            "definition" : "Biological species refers to samples taken from non-human subjects. - Preferred system(s): SNOMED CT [TypeOfSpeciesCodelist]",
            "min" : 0,
            "max" : "1",
            "type" : [
              {
                "code" : "CodeableConcept"
              }
            ]
          },
          {
            "id" : "SpecimenInformation.material",
            "path" : "SpecimenInformation.material",
            "short" : "A.2.3.3 - Material",
            "definition" : "Material of the collected and examined sample. - Preferred system(s): SNOMED CT [SpecimenMaterialCodelist]",
            "min" : 1,
            "max" : "1",
            "type" : [
              {
                "code" : "CodeableConcept"
              }
            ]
          },
          {
            "id" : "SpecimenInformation.collectionDate",
            "path" : "SpecimenInformation.collectionDate",
            "short" : "A.2.3.4 - Collection period",
            "definition" : "Date and time or duration of sample collection. - Preferred system(s): ISO 8601",
            "min" : 0,
            "max" : "1",
            "type" : [
              {
                "code" : "dateTime"
              }
            ]
          },
          {
            "id" : "SpecimenInformation.anatomicLocation",
            "path" : "SpecimenInformation.anatomicLocation",
            "short" : "A.2.3.5 - Anatomical location",
            "definition" : "Anatomical location (position within the body, laterality) from which the material is taken, such as 'left elbow'. - Preferred system(s): SNOMED CT [BodyLacation|LocationICT-O-3|Laterality Codelists]",
            "min" : 0,
            "max" : "1",
            "type" : [
              {
                "code" : "CodeableConcept"
              }
            ]
          },
          {
            "id" : "SpecimenInformation.morphology",
            "path" : "SpecimenInformation.morphology",
            "short" : "A.2.3.6 - Morphology",
            "definition" : "Morphological abnormalities of the anatomical location from which the material is taken, such as 'lesion or ulcer'. - Preferred system(s): SNOMED CT [MorfologyCodelist]",
            "min" : 0,
            "max" : "1",
            "type" : [
              {
                "code" : "CodeableConcept"
              }
            ]
          },
          {
            "id" : "SpecimenInformation.sourceDevice",
            "path" : "SpecimenInformation.sourceDevice",
            "short" : "A.2.3.7 - Source Device",
            "definition" : "In case the material is not directly taken from the patient but comes from an object related to the patient, such as a 'catheter'.\n - Preferred system(s): SNOMED CT\n - Preferred system(s): EMDN",
            "min" : 0,
            "max" : "1",
            "type" : [
              {
                "code" : "CodeableConcept"
              }
            ]
          },
          {
            "id" : "SpecimenInformation.procedure",
            "path" : "SpecimenInformation.procedure",
            "short" : "A.2.3.8 - Collection procedure/method",
            "definition" : "Method, manner of sample collection, if relevant to the results. - Preferred system(s): SNOMED CT [CollectionMethodCodelist]",
            "min" : 0,
            "max" : "1",
            "type" : [
              {
                "code" : "CodeableConcept"
              }
            ]
          },
          {
            "id" : "SpecimenInformation.receivedDateTime",
            "path" : "SpecimenInformation.receivedDateTime",
            "short" : "A.2.3.9 - Received date",
            "definition" : "Date and time the sample is received by the facility performing the examination. - Preferred system(s): ISO 8601",
            "min" : 0,
            "max" : "1",
            "type" : [
              {
                "code" : "dateTime"
              }
            ]
          }
        ]
      }
    }