HL7 Czech Imaging Report IG
0.1.0-ballot - ci-build CZ

HL7 Czech Imaging Report IG, published by HL7 Czech Republic. This guide is not an authorized publication; it is the continuous build for version 0.1.0-ballot built by the FHIR (HL7® FHIR® Standard) CI Build. This version is based on the current content of https://github.com/HL7-cz/img/ and changes regularly. See the Directory of published versions

Logical Model: A.2.3 - Sample information - JSON Profile

Draft as of 2026-05-26

JSON representation of the SpecimenInformation logical model.

Raw json | Download

{
  "resourceType" : "StructureDefinition",
  "id" : "SpecimenInformation",
  "language" : "en",
  "text" : {
    "status" : "extensions"
  },
  "url" : "https://hl7.cz/fhir/img/StructureDefinition/SpecimenInformation",
  "version" : "0.1.0-ballot",
  "name" : "LogEnSpecimenInformationCz",
  "title" : "A.2.3 - Sample information",
  "status" : "draft",
  "date" : "2026-05-26T08:31:12+00:00",
  "publisher" : "HL7 Czech Republic",
  "contact" : [
    {
      "name" : "HL7 Czech Republic",
      "telecom" : [
        {
          "system" : "url",
          "value" : "https://www.hl7.cz/"
        }
      ]
    }
  ],
  "description" : "Imaging Report - Imaging Report sample information - A.2.3 \r\nInformation about the sample if the subject of the examination is a sample.",
  "jurisdiction" : [
    {
      "coding" : [
        {
          "system" : "urn:iso:std:iso:3166",
          "code" : "CZ",
          "display" : "Czechia"
        }
      ]
    }
  ],
  "fhirVersion" : "4.0.1",
  "kind" : "logical",
  "abstract" : false,
  "type" : "https://hl7.cz/fhir/img/StructureDefinition/SpecimenInformation",
  "baseDefinition" : "http://hl7.org/fhir/StructureDefinition/Base",
  "derivation" : "specialization",
  "snapshot" : {
    "extension" : [
      {
        "url" : "http://hl7.org/fhir/tools/StructureDefinition/snapshot-base-version",
        "valueString" : "4.0.1"
      }
    ],
    "element" : [
      {
        "id" : "SpecimenInformation",
        "path" : "SpecimenInformation",
        "short" : "A.2.3 - Sample information",
        "definition" : "Imaging Report - Imaging Report sample information - A.2.3 \r\nInformation about the sample if the subject of the examination is a sample.",
        "min" : 0,
        "max" : "*",
        "base" : {
          "path" : "Base",
          "min" : 0,
          "max" : "*"
        },
        "isModifier" : false
      },
      {
        "id" : "SpecimenInformation.identifier",
        "path" : "SpecimenInformation.identifier",
        "short" : "A.2.3.1 - Specimen identifier",
        "definition" : "Sample identifier that is unique within a defined scope, e.g., identifier assigned by an ordering system, collection site, receiving site, etc.",
        "min" : 1,
        "max" : "*",
        "base" : {
          "path" : "SpecimenInformation.identifier",
          "min" : 1,
          "max" : "*"
        },
        "type" : [
          {
            "code" : "Identifier"
          }
        ]
      },
      {
        "id" : "SpecimenInformation.species",
        "path" : "SpecimenInformation.species",
        "short" : "A.2.3.2 - Type of species",
        "definition" : "Biological species refers to samples taken from non-human subjects. - Preferred system(s): SNOMED CT [TypeOfSpeciesCodelist]",
        "min" : 0,
        "max" : "1",
        "base" : {
          "path" : "SpecimenInformation.species",
          "min" : 0,
          "max" : "1"
        },
        "type" : [
          {
            "code" : "CodeableConcept"
          }
        ]
      },
      {
        "id" : "SpecimenInformation.material",
        "path" : "SpecimenInformation.material",
        "short" : "A.2.3.3 - Material",
        "definition" : "Material of the collected and examined sample. - Preferred system(s): SNOMED CT [SpecimenMaterialCodelist]",
        "min" : 1,
        "max" : "1",
        "base" : {
          "path" : "SpecimenInformation.material",
          "min" : 1,
          "max" : "1"
        },
        "type" : [
          {
            "code" : "CodeableConcept"
          }
        ]
      },
      {
        "id" : "SpecimenInformation.collectionDate",
        "path" : "SpecimenInformation.collectionDate",
        "short" : "A.2.3.4 - Collection period",
        "definition" : "Date and time or duration of sample collection. - Preferred system(s): ISO 8601",
        "min" : 0,
        "max" : "1",
        "base" : {
          "path" : "SpecimenInformation.collectionDate",
          "min" : 0,
          "max" : "1"
        },
        "type" : [
          {
            "code" : "dateTime"
          }
        ]
      },
      {
        "id" : "SpecimenInformation.anatomicLocation",
        "path" : "SpecimenInformation.anatomicLocation",
        "short" : "A.2.3.5 - Anatomical location",
        "definition" : "Anatomical location (position within the body, laterality) from which the material is taken, such as 'left elbow'. - Preferred system(s): SNOMED CT [BodyLacation|LocationICT-O-3|Laterality Codelists]",
        "min" : 0,
        "max" : "1",
        "base" : {
          "path" : "SpecimenInformation.anatomicLocation",
          "min" : 0,
          "max" : "1"
        },
        "type" : [
          {
            "code" : "CodeableConcept"
          }
        ]
      },
      {
        "id" : "SpecimenInformation.morphology",
        "path" : "SpecimenInformation.morphology",
        "short" : "A.2.3.6 - Morphology",
        "definition" : "Morphological abnormalities of the anatomical location from which the material is taken, such as 'lesion or ulcer'. - Preferred system(s): SNOMED CT [MorfologyCodelist]",
        "min" : 0,
        "max" : "1",
        "base" : {
          "path" : "SpecimenInformation.morphology",
          "min" : 0,
          "max" : "1"
        },
        "type" : [
          {
            "code" : "CodeableConcept"
          }
        ]
      },
      {
        "id" : "SpecimenInformation.sourceDevice",
        "path" : "SpecimenInformation.sourceDevice",
        "short" : "A.2.3.7 - Source Device",
        "definition" : "In case the material is not directly taken from the patient but comes from an object related to the patient, such as a 'catheter'.\n - Preferred system(s): SNOMED CT\n - Preferred system(s): EMDN",
        "min" : 0,
        "max" : "1",
        "base" : {
          "path" : "SpecimenInformation.sourceDevice",
          "min" : 0,
          "max" : "1"
        },
        "type" : [
          {
            "code" : "CodeableConcept"
          }
        ]
      },
      {
        "id" : "SpecimenInformation.procedure",
        "path" : "SpecimenInformation.procedure",
        "short" : "A.2.3.8 - Collection procedure/method",
        "definition" : "Method, manner of sample collection, if relevant to the results. - Preferred system(s): SNOMED CT [CollectionMethodCodelist]",
        "min" : 0,
        "max" : "1",
        "base" : {
          "path" : "SpecimenInformation.procedure",
          "min" : 0,
          "max" : "1"
        },
        "type" : [
          {
            "code" : "CodeableConcept"
          }
        ]
      },
      {
        "id" : "SpecimenInformation.receivedDateTime",
        "path" : "SpecimenInformation.receivedDateTime",
        "short" : "A.2.3.9 - Received date",
        "definition" : "Date and time the sample is received by the facility performing the examination. - Preferred system(s): ISO 8601",
        "min" : 0,
        "max" : "1",
        "base" : {
          "path" : "SpecimenInformation.receivedDateTime",
          "min" : 0,
          "max" : "1"
        },
        "type" : [
          {
            "code" : "dateTime"
          }
        ]
      }
    ]
  },
  "differential" : {
    "element" : [
      {
        "id" : "SpecimenInformation",
        "path" : "SpecimenInformation",
        "short" : "A.2.3 - Sample information",
        "definition" : "Imaging Report - Imaging Report sample information - A.2.3 \r\nInformation about the sample if the subject of the examination is a sample."
      },
      {
        "id" : "SpecimenInformation.identifier",
        "path" : "SpecimenInformation.identifier",
        "short" : "A.2.3.1 - Specimen identifier",
        "definition" : "Sample identifier that is unique within a defined scope, e.g., identifier assigned by an ordering system, collection site, receiving site, etc.",
        "min" : 1,
        "max" : "*",
        "type" : [
          {
            "code" : "Identifier"
          }
        ]
      },
      {
        "id" : "SpecimenInformation.species",
        "path" : "SpecimenInformation.species",
        "short" : "A.2.3.2 - Type of species",
        "definition" : "Biological species refers to samples taken from non-human subjects. - Preferred system(s): SNOMED CT [TypeOfSpeciesCodelist]",
        "min" : 0,
        "max" : "1",
        "type" : [
          {
            "code" : "CodeableConcept"
          }
        ]
      },
      {
        "id" : "SpecimenInformation.material",
        "path" : "SpecimenInformation.material",
        "short" : "A.2.3.3 - Material",
        "definition" : "Material of the collected and examined sample. - Preferred system(s): SNOMED CT [SpecimenMaterialCodelist]",
        "min" : 1,
        "max" : "1",
        "type" : [
          {
            "code" : "CodeableConcept"
          }
        ]
      },
      {
        "id" : "SpecimenInformation.collectionDate",
        "path" : "SpecimenInformation.collectionDate",
        "short" : "A.2.3.4 - Collection period",
        "definition" : "Date and time or duration of sample collection. - Preferred system(s): ISO 8601",
        "min" : 0,
        "max" : "1",
        "type" : [
          {
            "code" : "dateTime"
          }
        ]
      },
      {
        "id" : "SpecimenInformation.anatomicLocation",
        "path" : "SpecimenInformation.anatomicLocation",
        "short" : "A.2.3.5 - Anatomical location",
        "definition" : "Anatomical location (position within the body, laterality) from which the material is taken, such as 'left elbow'. - Preferred system(s): SNOMED CT [BodyLacation|LocationICT-O-3|Laterality Codelists]",
        "min" : 0,
        "max" : "1",
        "type" : [
          {
            "code" : "CodeableConcept"
          }
        ]
      },
      {
        "id" : "SpecimenInformation.morphology",
        "path" : "SpecimenInformation.morphology",
        "short" : "A.2.3.6 - Morphology",
        "definition" : "Morphological abnormalities of the anatomical location from which the material is taken, such as 'lesion or ulcer'. - Preferred system(s): SNOMED CT [MorfologyCodelist]",
        "min" : 0,
        "max" : "1",
        "type" : [
          {
            "code" : "CodeableConcept"
          }
        ]
      },
      {
        "id" : "SpecimenInformation.sourceDevice",
        "path" : "SpecimenInformation.sourceDevice",
        "short" : "A.2.3.7 - Source Device",
        "definition" : "In case the material is not directly taken from the patient but comes from an object related to the patient, such as a 'catheter'.\n - Preferred system(s): SNOMED CT\n - Preferred system(s): EMDN",
        "min" : 0,
        "max" : "1",
        "type" : [
          {
            "code" : "CodeableConcept"
          }
        ]
      },
      {
        "id" : "SpecimenInformation.procedure",
        "path" : "SpecimenInformation.procedure",
        "short" : "A.2.3.8 - Collection procedure/method",
        "definition" : "Method, manner of sample collection, if relevant to the results. - Preferred system(s): SNOMED CT [CollectionMethodCodelist]",
        "min" : 0,
        "max" : "1",
        "type" : [
          {
            "code" : "CodeableConcept"
          }
        ]
      },
      {
        "id" : "SpecimenInformation.receivedDateTime",
        "path" : "SpecimenInformation.receivedDateTime",
        "short" : "A.2.3.9 - Received date",
        "definition" : "Date and time the sample is received by the facility performing the examination. - Preferred system(s): ISO 8601",
        "min" : 0,
        "max" : "1",
        "type" : [
          {
            "code" : "dateTime"
          }
        ]
      }
    ]
  }
}