HL7 Czech Base and Core Implementation Guide
0.3.0-ballot - ci-build
HL7 Czech Base and Core Implementation Guide, published by HL7 Czech Republic. This guide is not an authorized publication; it is the continuous build for version 0.3.0-ballot built by the FHIR (HL7® FHIR® Standard) CI Build. This version is based on the current content of https://github.com/HL7-cz/cz-core/ and changes regularly. See the Directory of published versions
Official URL: https://hl7.cz/fhir/core/StructureDefinition/cz-specimen | Version: 0.3.0-ballot | |||
Draft as of 2025-08-15 | Computable Name: CZ_Specimen |
Czech national profile defines how to represent Specimens in HL7 FHIR for the purpose of this guide.
Specimens are samples of material that may be:
• taken from a biological entity, living or dead
• taken from a physical object or environment
Some samples are biological and may contain one or more components including, but not limited to, cellular molecules, cells, tissues, organs, body fluids, embryos, and body excretions. The source of samples includes substances used for diagnostic and environmental testing. The focus of sample sources is on the process of collecting, maintaining, and processing the sample, as well as where the sample came from.
Usages:
You can also check for usages in the FHIR IG Statistics
Description of Profiles, Differentials, Snapshots and how the different presentations work.
Name | Flags | Card. | Type | Description & Constraints Filter: ![]() ![]() |
---|---|---|---|---|
![]() ![]() |
0..* | Specimen | Czech Specimen | |
![]() ![]() ![]() |
?!Σ | 0..1 | uri | A set of rules under which this content was created |
![]() ![]() ![]() |
?! | 0..* | Extension | Extensions that cannot be ignored |
![]() ![]() ![]() |
SΣ | 0..* | Identifier | External Identifier |
![]() ![]() ![]() |
?!SΣ | 0..1 | code | available | unavailable | unsatisfactory | entered-in-error Binding: SpecimenStatus (required): Codes providing the status/availability of a specimen. |
![]() ![]() ![]() |
Σ | 0..1 | CodeableConcept | Kind of material that forms the specimen Binding: Specimen Type (preferred) |
![]() ![]() ![]() |
SΣ | 0..1 | Reference(Group | Device: Performer/Observer (CZ) | Medical Device (CZ) | Substance | Location (CZ core) | Patient (CZ core)) | In the initial iteration of the Czech interoperability project, this is CZ_PatientCore. |
![]() ![]() ![]() |
SΣ | 0..1 | dateTime | The time when specimen was received for processing |
![]() ![]() ![]() |
S | 0..* | Reference(Specimen (CZ)) | Specimen from which this specimen originated |
![]() ![]() ![]() |
S | 0..* | Reference(ServiceRequest) | Why the specimen was collected |
![]() ![]() ![]() |
0..* | BackboneElement | Processing and processing step details to include when not implicit from specimen. | |
![]() ![]() ![]() ![]() |
?!Σ | 0..* | Extension | Extensions that cannot be ignored even if unrecognized |
![]() ![]() ![]() ![]() |
0..* | Reference(Substance | Substance: Specimen Additive Substance (CZ)) | Material used in the processing step | |
![]() ![]() ![]() |
SΣ | 0..* | CodeableConcept | State of the specimen Binding: hl7VS-specimenCondition (extensible): Codes describing the state of the specimen. |
![]() ![]() ![]() |
S | 0..* | Annotation | Comments |
![]() |
Path | Conformance | ValueSet | URI |
Specimen.status | required | SpecimenStatushttp://hl7.org/fhir/ValueSet/specimen-status|4.0.1 From the FHIR Standard | |
Specimen.type | preferred | CZ_SpecimenTypeVshttps://hl7.cz/fhir/core/ValueSet/cz-specimentype-vs From this IG | |
Specimen.condition | extensible | Hl7VSSpecimenConditionhttp://terminology.hl7.org/ValueSet/v2-0493 |
Id | Grade | Path(s) | Details | Requirements |
dom-2 | error | Specimen | If the resource is contained in another resource, it SHALL NOT contain nested Resources : contained.contained.empty() | |
dom-3 | error | Specimen | If the resource is contained in another resource, it SHALL be referred to from elsewhere in the resource or SHALL refer to the containing resource : contained.where((('#'+id in (%resource.descendants().reference | %resource.descendants().as(canonical) | %resource.descendants().as(uri) | %resource.descendants().as(url))) or descendants().where(reference = '#').exists() or descendants().where(as(canonical) = '#').exists() or descendants().where(as(canonical) = '#').exists()).not()).trace('unmatched', id).empty() | |
dom-4 | error | Specimen | If a resource is contained in another resource, it SHALL NOT have a meta.versionId or a meta.lastUpdated : contained.meta.versionId.empty() and contained.meta.lastUpdated.empty() | |
dom-5 | error | Specimen | If a resource is contained in another resource, it SHALL NOT have a security label : contained.meta.security.empty() | |
dom-6 | best practice | Specimen | A resource should have narrative for robust management : text.`div`.exists() | |
ele-1 | error | **ALL** elements | All FHIR elements must have a @value or children : hasValue() or (children().count() > id.count()) | |
ext-1 | error | **ALL** extensions | Must have either extensions or value[x], not both : extension.exists() != value.exists() |
This structure is derived from Specimen
Name | Flags | Card. | Type | Description & Constraints Filter: ![]() ![]() |
---|---|---|---|---|
![]() ![]() |
0..* | Specimen | Czech Specimen | |
![]() ![]() ![]() |
S | 0..* | Identifier | External Identifier |
![]() ![]() ![]() |
S | 0..1 | code | available | unavailable | unsatisfactory | entered-in-error |
![]() ![]() ![]() |
0..1 | CodeableConcept | Kind of material that forms the specimen Binding: Specimen Type (preferred) | |
![]() ![]() ![]() |
S | 0..1 | Reference(Group | Device: Performer/Observer (CZ) | Medical Device (CZ) | Substance | Location (CZ core) | Patient (CZ core)) | In the initial iteration of the Czech interoperability project, this is CZ_PatientCore. |
![]() ![]() ![]() |
S | 0..1 | dateTime | The time when specimen was received for processing |
![]() ![]() ![]() |
S | 0..* | Reference(Specimen (CZ)) | Specimen from which this specimen originated |
![]() ![]() ![]() |
S | 0..* | Reference(ServiceRequest) | Why the specimen was collected |
![]() ![]() ![]() |
||||
![]() ![]() ![]() ![]() |
0..* | Extension | Extension Slice: Unordered, Open by value:url | |
![]() ![]() ![]() ![]() ![]() |
0..1 | (Complex) | Target anatomic location or structure URL: http://hl7.org/fhir/StructureDefinition/bodySite | |
![]() ![]() ![]() ![]() ![]() ![]() |
1..1 | Reference(Body Structure (CZ)) | Value of extension | |
![]() ![]() ![]() ![]() |
0..1 | Reference(Practitioner (CZ core) | Practitioner Role (CZ core)) | Who collected the specimen | |
![]() ![]() ![]() ![]() |
0..1 | CodeableConcept | Anatomical collection site Binding: SNOMEDCTBodyStructures (preferred) | |
![]() ![]() ![]() |
0..* | BackboneElement | Processing and processing step details to include when not implicit from specimen. | |
![]() ![]() ![]() ![]() |
0..* | Reference(Substance | Substance: Specimen Additive Substance (CZ)) | Material used in the processing step | |
![]() ![]() ![]() |
||||
![]() ![]() ![]() ![]() |
0..* | Extension | Extension Slice: Unordered, Open by value:url | |
![]() ![]() ![]() ![]() ![]() |
0..1 | (Complex) | Optional Extensions Element URL: http://hl7.org/fhir/5.0/StructureDefinition/extension-Specimen.container.device | |
![]() ![]() ![]() ![]() ![]() ![]() |
1..1 | Reference(Medical Device (CZ)) | Value of extension | |
![]() ![]() ![]() ![]() |
0..1 | CodeableConcept | Kind of container directly associated with specimen Binding: Specimen Container (preferred) | |
![]() ![]() ![]() ![]() |
0..0 | |||
![]() ![]() ![]() |
S | 0..* | CodeableConcept | State of the specimen |
![]() ![]() ![]() |
S | 0..* | Annotation | Comments |
![]() |
Path | Conformance | ValueSet | URI |
Specimen.type | preferred | CZ_SpecimenTypeVshttps://hl7.cz/fhir/core/ValueSet/cz-specimentype-vs From this IG | |
Specimen.collection.bodySite | preferred | SNOMEDCTBodyStructureshttp://hl7.org/fhir/ValueSet/body-site From the FHIR Standard | |
Specimen.container.type | preferred | CZ_SpecimenContainerVshttps://hl7.cz/fhir/core/ValueSet/cz-specimencontainer-vs From this IG |
Name | Flags | Card. | Type | Description & Constraints Filter: ![]() ![]() | ||||
---|---|---|---|---|---|---|---|---|
![]() ![]() |
0..* | Specimen | Czech Specimen | |||||
![]() ![]() ![]() |
Σ | 0..1 | id | Logical id of this artifact | ||||
![]() ![]() ![]() |
Σ | 0..1 | Meta | Metadata about the resource | ||||
![]() ![]() ![]() |
?!Σ | 0..1 | uri | A set of rules under which this content was created | ||||
![]() ![]() ![]() |
0..1 | code | Language of the resource content Binding: CommonLanguages (preferred): A human language.
| |||||
![]() ![]() ![]() |
0..1 | Narrative | Text summary of the resource, for human interpretation This profile does not constrain the narrative in regard to content, language, or traceability to data elements | |||||
![]() ![]() ![]() |
0..* | Resource | Contained, inline Resources | |||||
![]() ![]() ![]() |
0..* | Extension | Additional content defined by implementations | |||||
![]() ![]() ![]() |
?! | 0..* | Extension | Extensions that cannot be ignored | ||||
![]() ![]() ![]() |
SΣ | 0..* | Identifier | External Identifier | ||||
![]() ![]() ![]() |
Σ | 0..1 | Identifier | Identifier assigned by the lab | ||||
![]() ![]() ![]() |
?!SΣ | 0..1 | code | available | unavailable | unsatisfactory | entered-in-error Binding: SpecimenStatus (required): Codes providing the status/availability of a specimen. | ||||
![]() ![]() ![]() |
Σ | 0..1 | CodeableConcept | Kind of material that forms the specimen Binding: Specimen Type (preferred) | ||||
![]() ![]() ![]() |
SΣ | 0..1 | Reference(Group | Device: Performer/Observer (CZ) | Medical Device (CZ) | Substance | Location (CZ core) | Patient (CZ core)) | In the initial iteration of the Czech interoperability project, this is CZ_PatientCore. | ||||
![]() ![]() ![]() |
SΣ | 0..1 | dateTime | The time when specimen was received for processing | ||||
![]() ![]() ![]() |
S | 0..* | Reference(Specimen (CZ)) | Specimen from which this specimen originated | ||||
![]() ![]() ![]() |
S | 0..* | Reference(ServiceRequest) | Why the specimen was collected | ||||
![]() ![]() ![]() |
0..1 | BackboneElement | Collection details | |||||
![]() ![]() ![]() ![]() |
0..1 | string | Unique id for inter-element referencing | |||||
![]() ![]() ![]() ![]() |
0..* | Extension | Extension Slice: Unordered, Open by value:url | |||||
![]() ![]() ![]() ![]() ![]() |
0..1 | (Complex) | Target anatomic location or structure URL: http://hl7.org/fhir/StructureDefinition/bodySite | |||||
![]() ![]() ![]() ![]() ![]() ![]() |
0..1 | id | Unique id for inter-element referencing | |||||
![]() ![]() ![]() ![]() ![]() ![]() |
0..0 | |||||||
![]() ![]() ![]() ![]() ![]() ![]() |
1..1 | uri | "http://hl7.org/fhir/StructureDefinition/bodySite" | |||||
![]() ![]() ![]() ![]() ![]() ![]() |
1..1 | Reference(Body Structure (CZ)) | Value of extension | |||||
![]() ![]() ![]() ![]() |
?!Σ | 0..* | Extension | Extensions that cannot be ignored even if unrecognized | ||||
![]() ![]() ![]() ![]() |
Σ | 0..1 | Reference(Practitioner (CZ core) | Practitioner Role (CZ core)) | Who collected the specimen | ||||
![]() ![]() ![]() ![]() |
Σ | 0..1 | Collection time | |||||
![]() ![]() ![]() ![]() ![]() |
dateTime | |||||||
![]() ![]() ![]() ![]() ![]() |
Period | |||||||
![]() ![]() ![]() ![]() |
Σ | 0..1 | Duration | How long it took to collect specimen | ||||
![]() ![]() ![]() ![]() |
0..1 | SimpleQuantity | The quantity of specimen collected | |||||
![]() ![]() ![]() ![]() |
0..1 | CodeableConcept | Technique used to perform collection Binding: FHIRSpecimenCollectionMethod (example): The technique that is used to perform the procedure. | |||||
![]() ![]() ![]() ![]() |
0..1 | CodeableConcept | Anatomical collection site Binding: SNOMEDCTBodyStructures (preferred) | |||||
![]() ![]() ![]() ![]() |
Σ | 0..1 | Whether or how long patient abstained from food and/or drink Binding: hl7VS-relevantClincialInformation (extensible): Codes describing the fasting status of the patient. | |||||
![]() ![]() ![]() ![]() ![]() |
CodeableConcept | |||||||
![]() ![]() ![]() ![]() ![]() |
Duration | |||||||
![]() ![]() ![]() |
0..* | BackboneElement | Processing and processing step details to include when not implicit from specimen. | |||||
![]() ![]() ![]() ![]() |
0..1 | string | Unique id for inter-element referencing | |||||
![]() ![]() ![]() ![]() |
0..* | Extension | Additional content defined by implementations | |||||
![]() ![]() ![]() ![]() |
?!Σ | 0..* | Extension | Extensions that cannot be ignored even if unrecognized | ||||
![]() ![]() ![]() ![]() |
0..1 | string | Textual description of procedure | |||||
![]() ![]() ![]() ![]() |
0..1 | CodeableConcept | Indicates the treatment step applied to the specimen Binding: SpecimenProcessingProcedure (example): Type indicating the technique used to process the specimen. | |||||
![]() ![]() ![]() ![]() |
0..* | Reference(Substance | Substance: Specimen Additive Substance (CZ)) | Material used in the processing step | |||||
![]() ![]() ![]() ![]() |
0..1 | Date and time of specimen processing | ||||||
![]() ![]() ![]() ![]() ![]() |
dateTime | |||||||
![]() ![]() ![]() ![]() ![]() |
Period | |||||||
![]() ![]() ![]() |
0..* | BackboneElement | Direct container of specimen (tube/slide, etc.) | |||||
![]() ![]() ![]() ![]() |
0..1 | string | Unique id for inter-element referencing | |||||
![]() ![]() ![]() ![]() |
0..* | Extension | Extension Slice: Unordered, Open by value:url | |||||
![]() ![]() ![]() ![]() ![]() |
0..1 | (Complex) | Optional Extensions Element URL: http://hl7.org/fhir/5.0/StructureDefinition/extension-Specimen.container.device | |||||
![]() ![]() ![]() ![]() ![]() ![]() |
0..1 | string | Unique id for inter-element referencing | |||||
![]() ![]() ![]() ![]() ![]() ![]() |
0..0 | |||||||
![]() ![]() ![]() ![]() ![]() ![]() |
1..1 | uri | "http://hl7.org/fhir/5.0/StructureDefinition/extension-Specimen.container.device" | |||||
![]() ![]() ![]() ![]() ![]() ![]() |
1..1 | Reference(Medical Device (CZ)) | Value of extension | |||||
![]() ![]() ![]() ![]() |
?!Σ | 0..* | Extension | Extensions that cannot be ignored even if unrecognized | ||||
![]() ![]() ![]() ![]() |
Σ | 0..* | Identifier | Id for the container | ||||
![]() ![]() ![]() ![]() |
0..1 | string | Textual description of the container | |||||
![]() ![]() ![]() ![]() |
0..1 | CodeableConcept | Kind of container directly associated with specimen Binding: Specimen Container (preferred) | |||||
![]() ![]() ![]() ![]() |
0..1 | SimpleQuantity | Container volume or size | |||||
![]() ![]() ![]() ![]() |
0..1 | SimpleQuantity | Quantity of specimen within container | |||||
![]() ![]() ![]() |
SΣ | 0..* | CodeableConcept | State of the specimen Binding: hl7VS-specimenCondition (extensible): Codes describing the state of the specimen. | ||||
![]() ![]() ![]() |
S | 0..* | Annotation | Comments | ||||
![]() |
Path | Conformance | ValueSet | URI | |||
Specimen.language | preferred | CommonLanguageshttp://hl7.org/fhir/ValueSet/languages From the FHIR Standard
| ||||
Specimen.status | required | SpecimenStatushttp://hl7.org/fhir/ValueSet/specimen-status|4.0.1 From the FHIR Standard | ||||
Specimen.type | preferred | CZ_SpecimenTypeVshttps://hl7.cz/fhir/core/ValueSet/cz-specimentype-vs From this IG | ||||
Specimen.collection.method | example | FHIRSpecimenCollectionMethodhttp://hl7.org/fhir/ValueSet/specimen-collection-method From the FHIR Standard | ||||
Specimen.collection.bodySite | preferred | SNOMEDCTBodyStructureshttp://hl7.org/fhir/ValueSet/body-site From the FHIR Standard | ||||
Specimen.collection.fastingStatus[x] | extensible | Hl7VSRelevantClincialInformationhttp://terminology.hl7.org/ValueSet/v2-0916 | ||||
Specimen.processing.procedure | example | SpecimenProcessingProcedurehttp://hl7.org/fhir/ValueSet/specimen-processing-procedure From the FHIR Standard | ||||
Specimen.container.type | preferred | CZ_SpecimenContainerVshttps://hl7.cz/fhir/core/ValueSet/cz-specimencontainer-vs From this IG | ||||
Specimen.condition | extensible | Hl7VSSpecimenConditionhttp://terminology.hl7.org/ValueSet/v2-0493 |
Id | Grade | Path(s) | Details | Requirements |
dom-2 | error | Specimen | If the resource is contained in another resource, it SHALL NOT contain nested Resources : contained.contained.empty() | |
dom-3 | error | Specimen | If the resource is contained in another resource, it SHALL be referred to from elsewhere in the resource or SHALL refer to the containing resource : contained.where((('#'+id in (%resource.descendants().reference | %resource.descendants().as(canonical) | %resource.descendants().as(uri) | %resource.descendants().as(url))) or descendants().where(reference = '#').exists() or descendants().where(as(canonical) = '#').exists() or descendants().where(as(canonical) = '#').exists()).not()).trace('unmatched', id).empty() | |
dom-4 | error | Specimen | If a resource is contained in another resource, it SHALL NOT have a meta.versionId or a meta.lastUpdated : contained.meta.versionId.empty() and contained.meta.lastUpdated.empty() | |
dom-5 | error | Specimen | If a resource is contained in another resource, it SHALL NOT have a security label : contained.meta.security.empty() | |
dom-6 | best practice | Specimen | A resource should have narrative for robust management : text.`div`.exists() | |
ele-1 | error | **ALL** elements | All FHIR elements must have a @value or children : hasValue() or (children().count() > id.count()) | |
ext-1 | error | **ALL** extensions | Must have either extensions or value[x], not both : extension.exists() != value.exists() |
This structure is derived from Specimen
Summary
Must-Support: 8 elements
Prohibited: 1 element
Structures
This structure refers to these other structures:
Extensions
This structure refers to these extensions:
Key Elements View
Name | Flags | Card. | Type | Description & Constraints Filter: ![]() ![]() |
---|---|---|---|---|
![]() ![]() |
0..* | Specimen | Czech Specimen | |
![]() ![]() ![]() |
?!Σ | 0..1 | uri | A set of rules under which this content was created |
![]() ![]() ![]() |
?! | 0..* | Extension | Extensions that cannot be ignored |
![]() ![]() ![]() |
SΣ | 0..* | Identifier | External Identifier |
![]() ![]() ![]() |
?!SΣ | 0..1 | code | available | unavailable | unsatisfactory | entered-in-error Binding: SpecimenStatus (required): Codes providing the status/availability of a specimen. |
![]() ![]() ![]() |
Σ | 0..1 | CodeableConcept | Kind of material that forms the specimen Binding: Specimen Type (preferred) |
![]() ![]() ![]() |
SΣ | 0..1 | Reference(Group | Device: Performer/Observer (CZ) | Medical Device (CZ) | Substance | Location (CZ core) | Patient (CZ core)) | In the initial iteration of the Czech interoperability project, this is CZ_PatientCore. |
![]() ![]() ![]() |
SΣ | 0..1 | dateTime | The time when specimen was received for processing |
![]() ![]() ![]() |
S | 0..* | Reference(Specimen (CZ)) | Specimen from which this specimen originated |
![]() ![]() ![]() |
S | 0..* | Reference(ServiceRequest) | Why the specimen was collected |
![]() ![]() ![]() |
0..* | BackboneElement | Processing and processing step details to include when not implicit from specimen. | |
![]() ![]() ![]() ![]() |
?!Σ | 0..* | Extension | Extensions that cannot be ignored even if unrecognized |
![]() ![]() ![]() ![]() |
0..* | Reference(Substance | Substance: Specimen Additive Substance (CZ)) | Material used in the processing step | |
![]() ![]() ![]() |
SΣ | 0..* | CodeableConcept | State of the specimen Binding: hl7VS-specimenCondition (extensible): Codes describing the state of the specimen. |
![]() ![]() ![]() |
S | 0..* | Annotation | Comments |
![]() |
Path | Conformance | ValueSet | URI |
Specimen.status | required | SpecimenStatushttp://hl7.org/fhir/ValueSet/specimen-status|4.0.1 From the FHIR Standard | |
Specimen.type | preferred | CZ_SpecimenTypeVshttps://hl7.cz/fhir/core/ValueSet/cz-specimentype-vs From this IG | |
Specimen.condition | extensible | Hl7VSSpecimenConditionhttp://terminology.hl7.org/ValueSet/v2-0493 |
Id | Grade | Path(s) | Details | Requirements |
dom-2 | error | Specimen | If the resource is contained in another resource, it SHALL NOT contain nested Resources : contained.contained.empty() | |
dom-3 | error | Specimen | If the resource is contained in another resource, it SHALL be referred to from elsewhere in the resource or SHALL refer to the containing resource : contained.where((('#'+id in (%resource.descendants().reference | %resource.descendants().as(canonical) | %resource.descendants().as(uri) | %resource.descendants().as(url))) or descendants().where(reference = '#').exists() or descendants().where(as(canonical) = '#').exists() or descendants().where(as(canonical) = '#').exists()).not()).trace('unmatched', id).empty() | |
dom-4 | error | Specimen | If a resource is contained in another resource, it SHALL NOT have a meta.versionId or a meta.lastUpdated : contained.meta.versionId.empty() and contained.meta.lastUpdated.empty() | |
dom-5 | error | Specimen | If a resource is contained in another resource, it SHALL NOT have a security label : contained.meta.security.empty() | |
dom-6 | best practice | Specimen | A resource should have narrative for robust management : text.`div`.exists() | |
ele-1 | error | **ALL** elements | All FHIR elements must have a @value or children : hasValue() or (children().count() > id.count()) | |
ext-1 | error | **ALL** extensions | Must have either extensions or value[x], not both : extension.exists() != value.exists() |
Differential View
This structure is derived from Specimen
Name | Flags | Card. | Type | Description & Constraints Filter: ![]() ![]() |
---|---|---|---|---|
![]() ![]() |
0..* | Specimen | Czech Specimen | |
![]() ![]() ![]() |
S | 0..* | Identifier | External Identifier |
![]() ![]() ![]() |
S | 0..1 | code | available | unavailable | unsatisfactory | entered-in-error |
![]() ![]() ![]() |
0..1 | CodeableConcept | Kind of material that forms the specimen Binding: Specimen Type (preferred) | |
![]() ![]() ![]() |
S | 0..1 | Reference(Group | Device: Performer/Observer (CZ) | Medical Device (CZ) | Substance | Location (CZ core) | Patient (CZ core)) | In the initial iteration of the Czech interoperability project, this is CZ_PatientCore. |
![]() ![]() ![]() |
S | 0..1 | dateTime | The time when specimen was received for processing |
![]() ![]() ![]() |
S | 0..* | Reference(Specimen (CZ)) | Specimen from which this specimen originated |
![]() ![]() ![]() |
S | 0..* | Reference(ServiceRequest) | Why the specimen was collected |
![]() ![]() ![]() |
||||
![]() ![]() ![]() ![]() |
0..* | Extension | Extension Slice: Unordered, Open by value:url | |
![]() ![]() ![]() ![]() ![]() |
0..1 | (Complex) | Target anatomic location or structure URL: http://hl7.org/fhir/StructureDefinition/bodySite | |
![]() ![]() ![]() ![]() ![]() ![]() |
1..1 | Reference(Body Structure (CZ)) | Value of extension | |
![]() ![]() ![]() ![]() |
0..1 | Reference(Practitioner (CZ core) | Practitioner Role (CZ core)) | Who collected the specimen | |
![]() ![]() ![]() ![]() |
0..1 | CodeableConcept | Anatomical collection site Binding: SNOMEDCTBodyStructures (preferred) | |
![]() ![]() ![]() |
0..* | BackboneElement | Processing and processing step details to include when not implicit from specimen. | |
![]() ![]() ![]() ![]() |
0..* | Reference(Substance | Substance: Specimen Additive Substance (CZ)) | Material used in the processing step | |
![]() ![]() ![]() |
||||
![]() ![]() ![]() ![]() |
0..* | Extension | Extension Slice: Unordered, Open by value:url | |
![]() ![]() ![]() ![]() ![]() |
0..1 | (Complex) | Optional Extensions Element URL: http://hl7.org/fhir/5.0/StructureDefinition/extension-Specimen.container.device | |
![]() ![]() ![]() ![]() ![]() ![]() |
1..1 | Reference(Medical Device (CZ)) | Value of extension | |
![]() ![]() ![]() ![]() |
0..1 | CodeableConcept | Kind of container directly associated with specimen Binding: Specimen Container (preferred) | |
![]() ![]() ![]() ![]() |
0..0 | |||
![]() ![]() ![]() |
S | 0..* | CodeableConcept | State of the specimen |
![]() ![]() ![]() |
S | 0..* | Annotation | Comments |
![]() |
Path | Conformance | ValueSet | URI |
Specimen.type | preferred | CZ_SpecimenTypeVshttps://hl7.cz/fhir/core/ValueSet/cz-specimentype-vs From this IG | |
Specimen.collection.bodySite | preferred | SNOMEDCTBodyStructureshttp://hl7.org/fhir/ValueSet/body-site From the FHIR Standard | |
Specimen.container.type | preferred | CZ_SpecimenContainerVshttps://hl7.cz/fhir/core/ValueSet/cz-specimencontainer-vs From this IG |
Snapshot View
Name | Flags | Card. | Type | Description & Constraints Filter: ![]() ![]() | ||||
---|---|---|---|---|---|---|---|---|
![]() ![]() |
0..* | Specimen | Czech Specimen | |||||
![]() ![]() ![]() |
Σ | 0..1 | id | Logical id of this artifact | ||||
![]() ![]() ![]() |
Σ | 0..1 | Meta | Metadata about the resource | ||||
![]() ![]() ![]() |
?!Σ | 0..1 | uri | A set of rules under which this content was created | ||||
![]() ![]() ![]() |
0..1 | code | Language of the resource content Binding: CommonLanguages (preferred): A human language.
| |||||
![]() ![]() ![]() |
0..1 | Narrative | Text summary of the resource, for human interpretation This profile does not constrain the narrative in regard to content, language, or traceability to data elements | |||||
![]() ![]() ![]() |
0..* | Resource | Contained, inline Resources | |||||
![]() ![]() ![]() |
0..* | Extension | Additional content defined by implementations | |||||
![]() ![]() ![]() |
?! | 0..* | Extension | Extensions that cannot be ignored | ||||
![]() ![]() ![]() |
SΣ | 0..* | Identifier | External Identifier | ||||
![]() ![]() ![]() |
Σ | 0..1 | Identifier | Identifier assigned by the lab | ||||
![]() ![]() ![]() |
?!SΣ | 0..1 | code | available | unavailable | unsatisfactory | entered-in-error Binding: SpecimenStatus (required): Codes providing the status/availability of a specimen. | ||||
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Σ | 0..1 | CodeableConcept | Kind of material that forms the specimen Binding: Specimen Type (preferred) | ||||
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SΣ | 0..1 | Reference(Group | Device: Performer/Observer (CZ) | Medical Device (CZ) | Substance | Location (CZ core) | Patient (CZ core)) | In the initial iteration of the Czech interoperability project, this is CZ_PatientCore. | ||||
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SΣ | 0..1 | dateTime | The time when specimen was received for processing | ||||
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S | 0..* | Reference(Specimen (CZ)) | Specimen from which this specimen originated | ||||
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S | 0..* | Reference(ServiceRequest) | Why the specimen was collected | ||||
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0..1 | BackboneElement | Collection details | |||||
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0..1 | string | Unique id for inter-element referencing | |||||
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0..* | Extension | Extension Slice: Unordered, Open by value:url | |||||
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0..1 | (Complex) | Target anatomic location or structure URL: http://hl7.org/fhir/StructureDefinition/bodySite | |||||
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0..1 | id | Unique id for inter-element referencing | |||||
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0..0 | |||||||
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1..1 | uri | "http://hl7.org/fhir/StructureDefinition/bodySite" | |||||
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1..1 | Reference(Body Structure (CZ)) | Value of extension | |||||
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?!Σ | 0..* | Extension | Extensions that cannot be ignored even if unrecognized | ||||
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Σ | 0..1 | Reference(Practitioner (CZ core) | Practitioner Role (CZ core)) | Who collected the specimen | ||||
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Σ | 0..1 | Collection time | |||||
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dateTime | |||||||
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Period | |||||||
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Σ | 0..1 | Duration | How long it took to collect specimen | ||||
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0..1 | SimpleQuantity | The quantity of specimen collected | |||||
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0..1 | CodeableConcept | Technique used to perform collection Binding: FHIRSpecimenCollectionMethod (example): The technique that is used to perform the procedure. | |||||
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0..1 | CodeableConcept | Anatomical collection site Binding: SNOMEDCTBodyStructures (preferred) | |||||
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Σ | 0..1 | Whether or how long patient abstained from food and/or drink Binding: hl7VS-relevantClincialInformation (extensible): Codes describing the fasting status of the patient. | |||||
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CodeableConcept | |||||||
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Duration | |||||||
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0..* | BackboneElement | Processing and processing step details to include when not implicit from specimen. | |||||
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0..1 | string | Unique id for inter-element referencing | |||||
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0..* | Extension | Additional content defined by implementations | |||||
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?!Σ | 0..* | Extension | Extensions that cannot be ignored even if unrecognized | ||||
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0..1 | string | Textual description of procedure | |||||
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0..1 | CodeableConcept | Indicates the treatment step applied to the specimen Binding: SpecimenProcessingProcedure (example): Type indicating the technique used to process the specimen. | |||||
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0..* | Reference(Substance | Substance: Specimen Additive Substance (CZ)) | Material used in the processing step | |||||
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0..1 | Date and time of specimen processing | ||||||
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dateTime | |||||||
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Period | |||||||
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0..* | BackboneElement | Direct container of specimen (tube/slide, etc.) | |||||
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0..1 | string | Unique id for inter-element referencing | |||||
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0..* | Extension | Extension Slice: Unordered, Open by value:url | |||||
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0..1 | (Complex) | Optional Extensions Element URL: http://hl7.org/fhir/5.0/StructureDefinition/extension-Specimen.container.device | |||||
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0..1 | string | Unique id for inter-element referencing | |||||
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0..0 | |||||||
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1..1 | uri | "http://hl7.org/fhir/5.0/StructureDefinition/extension-Specimen.container.device" | |||||
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1..1 | Reference(Medical Device (CZ)) | Value of extension | |||||
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?!Σ | 0..* | Extension | Extensions that cannot be ignored even if unrecognized | ||||
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Σ | 0..* | Identifier | Id for the container | ||||
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0..1 | string | Textual description of the container | |||||
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0..1 | CodeableConcept | Kind of container directly associated with specimen Binding: Specimen Container (preferred) | |||||
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0..1 | SimpleQuantity | Container volume or size | |||||
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0..1 | SimpleQuantity | Quantity of specimen within container | |||||
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SΣ | 0..* | CodeableConcept | State of the specimen Binding: hl7VS-specimenCondition (extensible): Codes describing the state of the specimen. | ||||
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S | 0..* | Annotation | Comments | ||||
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Path | Conformance | ValueSet | URI | |||
Specimen.language | preferred | CommonLanguageshttp://hl7.org/fhir/ValueSet/languages From the FHIR Standard
| ||||
Specimen.status | required | SpecimenStatushttp://hl7.org/fhir/ValueSet/specimen-status|4.0.1 From the FHIR Standard | ||||
Specimen.type | preferred | CZ_SpecimenTypeVshttps://hl7.cz/fhir/core/ValueSet/cz-specimentype-vs From this IG | ||||
Specimen.collection.method | example | FHIRSpecimenCollectionMethodhttp://hl7.org/fhir/ValueSet/specimen-collection-method From the FHIR Standard | ||||
Specimen.collection.bodySite | preferred | SNOMEDCTBodyStructureshttp://hl7.org/fhir/ValueSet/body-site From the FHIR Standard | ||||
Specimen.collection.fastingStatus[x] | extensible | Hl7VSRelevantClincialInformationhttp://terminology.hl7.org/ValueSet/v2-0916 | ||||
Specimen.processing.procedure | example | SpecimenProcessingProcedurehttp://hl7.org/fhir/ValueSet/specimen-processing-procedure From the FHIR Standard | ||||
Specimen.container.type | preferred | CZ_SpecimenContainerVshttps://hl7.cz/fhir/core/ValueSet/cz-specimencontainer-vs From this IG | ||||
Specimen.condition | extensible | Hl7VSSpecimenConditionhttp://terminology.hl7.org/ValueSet/v2-0493 |
Id | Grade | Path(s) | Details | Requirements |
dom-2 | error | Specimen | If the resource is contained in another resource, it SHALL NOT contain nested Resources : contained.contained.empty() | |
dom-3 | error | Specimen | If the resource is contained in another resource, it SHALL be referred to from elsewhere in the resource or SHALL refer to the containing resource : contained.where((('#'+id in (%resource.descendants().reference | %resource.descendants().as(canonical) | %resource.descendants().as(uri) | %resource.descendants().as(url))) or descendants().where(reference = '#').exists() or descendants().where(as(canonical) = '#').exists() or descendants().where(as(canonical) = '#').exists()).not()).trace('unmatched', id).empty() | |
dom-4 | error | Specimen | If a resource is contained in another resource, it SHALL NOT have a meta.versionId or a meta.lastUpdated : contained.meta.versionId.empty() and contained.meta.lastUpdated.empty() | |
dom-5 | error | Specimen | If a resource is contained in another resource, it SHALL NOT have a security label : contained.meta.security.empty() | |
dom-6 | best practice | Specimen | A resource should have narrative for robust management : text.`div`.exists() | |
ele-1 | error | **ALL** elements | All FHIR elements must have a @value or children : hasValue() or (children().count() > id.count()) | |
ext-1 | error | **ALL** extensions | Must have either extensions or value[x], not both : extension.exists() != value.exists() |
This structure is derived from Specimen
Summary
Must-Support: 8 elements
Prohibited: 1 element
Structures
This structure refers to these other structures:
Extensions
This structure refers to these extensions:
Other representations of profile: CSV, Excel, Schematron