INFO:root:about to clone! DEBUG:root:running: git clone --recursive https://github.com/DigitalSQR/smart-base-test --branch main repo DEBUG:root:Time to deadline 35879.997361 seconds Cloning into 'repo'... DEBUG:root:running: wget -q https://github.com/HL7/fhir-ig-publisher/releases/latest/download/publisher.jar -O publisher.jar DEBUG:root:Time to deadline 35856.404245 seconds DEBUG:root:running: npm -g install fsh-sushi DEBUG:root:Time to deadline 35855.132113 seconds npm WARN deprecated inflight@1.0.6: This module is not supported, and leaks memory. Do not use it. Check out lru-cache if you want a good and tested way to coalesce async requests by a key value, which is much more comprehensive and powerful. npm WARN deprecated rimraf@2.6.3: Rimraf versions prior to v4 are no longer supported npm WARN deprecated glob@7.2.3: Glob versions prior to v9 are no longer supported added 120 packages in 4s 8 packages are looking for funding run `npm fund` for details npm notice npm notice New major version of npm available! 9.8.1 -> 10.9.0 npm notice Changelog: npm notice Run `npm install -g npm@10.9.0` to update! npm notice DEBUG:root:running: java -Xms19000m -Xmx19000m -jar ../publisher.jar -ig ig.json -api-key-file /etc/ig.builder.keyfile.ini -fhir-settings /etc/fhir-settings.json -auto-ig-build -tx http://tx.fhir.org -target https://build.fhir.org/ig/DigitalSQR/smart-base-test/ -out /scratch/repo DEBUG:root:Time to deadline 35850.595941 seconds FHIR IG Publisher Version 1.7.3 (Git# a923509a20e1). Built 2024-11-19T18:44:24.736Z (12 hours old) Detected Java version: 21-ea from /usr/local/openjdk-21 on Linux/amd64 (64bit). 19008MB available dir = /scratch/repo, path = /usr/local/openjdk-21/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin Parameters: -ig ig.json -api-key-file /etc/ig.builder.keyfile.ini -fhir-settings /etc/fhir-settings.json -auto-ig-build -tx http://tx.fhir.org -target https://build.fhir.org/ig/DigitalSQR/smart-base-test/ -out /scratch/repo Start Clock @ Wednesday, November 20, 2024, 7:24:20 AM Coordinated Universal Time (2024-11-20T07:24:20Z) Build FHIR IG from /scratch/repo (00:00.021 / 00:00.021, 89Mb) API keys loaded from /etc/fhir-settings.json (00:00.003 / 00:00.025, 89Mb) Package Cache: /var/lib/.fhir/packages (00:00.003 / 00:00.028, 89Mb) Run Sushi on /scratch/repo (00:00.004 / 00:00.032, 89Mb) Sushi: info Running SUSHI v3.12.1 (implements FHIR Shorthand specification v3.0.0) (00:00.533 / 00:00.565, 113Mb) Sushi: info Arguments: (00:00.000 / 00:00.566, 113Mb) Sushi: info --require-latest (00:00.000 / 00:00.566, 113Mb) Sushi: info --out /scratch/repo (00:00.000 / 00:00.566, 113Mb) Sushi: info /scratch/repo (00:00.000 / 00:00.567, 113Mb) Sushi: info Using configuration file: /scratch/repo/sushi-config.yaml (00:00.558 / 00:01.125, 113Mb) Sushi: info Importing FSH text... (00:00.125 / 00:01.251, 113Mb) Sushi: info Preprocessed 16 documents with 9 aliases. (00:00.102 / 00:01.353, 113Mb) Sushi: info Imported 15 definitions and 0 instances. (00:00.011 / 00:01.364, 113Mb) Sushi: info Checking /home/fhiruser/.fhir/packages for hl7.fhir.uv.tools#current... (00:00.001 / 00:01.366, 113Mb) Sushi: info Did not find hl7.fhir.uv.tools#current in /home/fhiruser/.fhir/packages. (00:00.028 / 00:01.395, 113Mb) Sushi: info Downloading hl7.fhir.uv.tools#current... https://build.fhir.org/ig/FHIR/fhir-tools-ig/branches/master/package.tgz (00:00.126 / 00:01.521, 113Mb) Sushi: info Downloaded hl7.fhir.uv.tools#current (00:00.014 / 00:01.536, 113Mb) Sushi: info Loaded package hl7.fhir.uv.tools#current (00:00.089 / 00:01.625, 113Mb) Sushi: info Checking /home/fhiruser/.fhir/packages for hl7.terminology#5.5.0... (00:00.000 / 00:01.626, 113Mb) Sushi: info Did not find hl7.terminology#5.5.0 in /home/fhiruser/.fhir/packages. (00:00.023 / 00:01.649, 113Mb) Sushi: info Downloading hl7.terminology#5.5.0... https://packages.fhir.org/hl7.terminology/5.5.0 (00:00.000 / 00:01.649, 113Mb) Sushi: info Downloaded hl7.terminology#5.5.0 (00:02.721 / 00:04.371, 113Mb) Sushi: info Loaded package hl7.terminology#5.5.0 (00:01.811 / 00:06.183, 113Mb) Sushi: info Checking /home/fhiruser/.fhir/packages for hl7.fhir.uv.extensions.r4#5.1.0... (00:00.000 / 00:06.183, 113Mb) Sushi: info Did not find hl7.fhir.uv.extensions.r4#5.1.0 in /home/fhiruser/.fhir/packages. (00:00.358 / 00:06.542, 113Mb) Sushi: info Downloading hl7.fhir.uv.extensions.r4#5.1.0... https://packages.fhir.org/hl7.fhir.uv.extensions.r4/5.1.0 (00:00.000 / 00:06.542, 113Mb) Sushi: info Downloaded hl7.fhir.uv.extensions.r4#5.1.0 (00:01.937 / 00:08.480, 113Mb) Sushi: info Loaded package hl7.fhir.uv.extensions.r4#5.1.0 (00:01.090 / 00:09.571, 113Mb) Sushi: info Checking /home/fhiruser/.fhir/packages for hl7.fhir.uv.cql#1.0.0... (00:00.000 / 00:09.572, 113Mb) Sushi: info Did not find hl7.fhir.uv.cql#1.0.0 in /home/fhiruser/.fhir/packages. (00:00.515 / 00:10.088, 113Mb) Sushi: info Downloading hl7.fhir.uv.cql#1.0.0... https://packages.fhir.org/hl7.fhir.uv.cql/1.0.0 (00:00.000 / 00:10.088, 113Mb) Sushi: info Downloaded hl7.fhir.uv.cql#1.0.0 (00:01.524 / 00:11.613, 113Mb) Sushi: info Loaded package hl7.fhir.uv.cql#1.0.0 (00:00.559 / 00:12.173, 113Mb) Sushi: info Checking /home/fhiruser/.fhir/packages for hl7.fhir.uv.crmi#1.0.0... (00:00.000 / 00:12.173, 113Mb) Sushi: info Did not find hl7.fhir.uv.crmi#1.0.0 in /home/fhiruser/.fhir/packages. (00:00.527 / 00:12.701, 113Mb) Sushi: info Downloading hl7.fhir.uv.crmi#1.0.0... https://packages.fhir.org/hl7.fhir.uv.crmi/1.0.0 (00:00.000 / 00:12.701, 113Mb) Sushi: info Downloaded hl7.fhir.uv.crmi#1.0.0 (00:01.876 / 00:14.578, 113Mb) Sushi: info Loaded package hl7.fhir.uv.crmi#1.0.0 (00:00.721 / 00:15.299, 113Mb) Sushi: info Checking /home/fhiruser/.fhir/packages for hl7.fhir.uv.sdc#3.0.0... (00:00.000 / 00:15.300, 113Mb) Sushi: info Did not find hl7.fhir.uv.sdc#3.0.0 in /home/fhiruser/.fhir/packages. (00:00.612 / 00:15.912, 113Mb) Sushi: info Downloading hl7.fhir.uv.sdc#3.0.0... https://packages.fhir.org/hl7.fhir.uv.sdc/3.0.0 (00:00.000 / 00:15.912, 113Mb) Sushi: info Downloaded hl7.fhir.uv.sdc#3.0.0 (00:01.440 / 00:17.353, 113Mb) Sushi: info Loaded package hl7.fhir.uv.sdc#3.0.0 (00:00.753 / 00:18.106, 113Mb) Sushi: info Checking /home/fhiruser/.fhir/packages for hl7.fhir.r4.core#4.0.1... (00:00.000 / 00:18.107, 113Mb) Sushi: info Did not find hl7.fhir.r4.core#4.0.1 in /home/fhiruser/.fhir/packages. (00:00.732 / 00:18.839, 113Mb) Sushi: info Downloading hl7.fhir.r4.core#4.0.1... https://packages.fhir.org/hl7.fhir.r4.core/4.0.1 (00:00.000 / 00:18.839, 113Mb) Sushi: info Downloaded hl7.fhir.r4.core#4.0.1 (00:02.904 / 00:21.744, 113Mb) Sushi: info Loaded package hl7.fhir.r4.core#4.0.1 (00:02.490 / 00:24.234, 113Mb) Sushi: info Found 6 files in input/* resource folders that were neither XML nor JSON. These files were not processed as resources by SUSHI. To see the unprocessed files in the logs, run SUSHI with the "--log-level debug" flag. (00:00.046 / 00:24.281, 113Mb) Sushi: info Converting FSH to FHIR resources... (00:00.001 / 00:24.282, 113Mb) Sushi: info Converted 15 FHIR StructureDefinitions. (00:00.641 / 00:24.923, 113Mb) Sushi: info Exporting FHIR resources as JSON... (00:00.000 / 00:24.924, 113Mb) Sushi: info Exported 15 FHIR resources as JSON. (00:00.099 / 00:25.023, 113Mb) Sushi: info Assembling Implementation Guide sources... (00:00.002 / 00:25.025, 113Mb) Sushi: info Generated ImplementationGuide-smart.who.int.base.json (00:00.032 / 00:25.057, 113Mb) Sushi: info Assembled Implementation Guide sources; ready for IG Publisher. (00:00.000 / 00:25.058, 113Mb) Sushi: ========================= SUSHI RESULTS =========================== (00:00.001 / 00:25.059, 113Mb) Sushi: | ------------------------------------------------------------- | (00:00.000 / 00:25.059, 113Mb) Sushi: | | Profiles | Extensions | Logicals | Resources | | (00:00.000 / 00:25.059, 113Mb) Sushi: | |-------------------------------------------------------------| | (00:00.000 / 00:25.060, 113Mb) Sushi: | | 13 | 2 | 0 | 0 | | (00:00.000 / 00:25.060, 113Mb) Sushi: | ------------------------------------------------------------- | (00:00.000 / 00:25.060, 113Mb) Sushi: | ------------------------------------------------------------- | (00:00.000 / 00:25.060, 113Mb) Sushi: | | ValueSets | CodeSystems | Instances | | (00:00.000 / 00:25.060, 113Mb) Sushi: | |-------------------------------------------------------------| | (00:00.000 / 00:25.061, 113Mb) Sushi: | | 0 | 0 | 0 | | (00:00.000 / 00:25.061, 113Mb) Sushi: | ------------------------------------------------------------- | (00:00.000 / 00:25.061, 113Mb) Sushi: | | (00:00.000 / 00:25.061, 113Mb) Sushi: =================================================================== (00:00.000 / 00:25.061, 113Mb) Sushi: | You're sailing along smoothly. 0 Errors 0 Warnings | (00:00.000 / 00:25.062, 113Mb) Sushi: =================================================================== (00:00.000 / 00:25.062, 113Mb) Unable to load IG as an r5 IG - try R4 (property code is a class com.google.gson.JsonPrimitive looking for an object) (00:00.626 / 00:25.688, 37Mb) Load Template from who.template.root#current (00:00.472 / 00:26.161, 70Mb) Installing who.template.root#current to the package cache Fetching: Installing who.template.root#current done. Load Template from fhir.base.template#current (00:01.255 / 00:27.416, 144Mb) Installing fhir.base.template#current to the package cache Fetching: Installing fhir.base.template#current done. onLoad.findSpreadsheets: onLoad.updateIg: [xslt] Processing /scratch/repo/template/onLoad-ig-working.xml to /scratch/repo/template/onLoad-ig-updated.xml [xslt] Loading stylesheet /scratch/repo/template/scripts/onLoad.xslt onLoad.extend: onLoad: Root directory: /scratch/repo (00:03.254 / 00:30.671, 142Mb) Terminology Cache is at /scratch/repo/input-cache/txcache. Trimming now (00:00.002 / 00:30.674, 142Mb) Core Package hl7.fhir.r4.core#4.0.1 Running Terminology Log: /tmp/ohfu-fhir-ig-13980946785756903074.log Connect to Terminology Server at http://tx.fhir.org (00:31.153 / 01:01.827, 605Mb) Installing hl7.fhir.pubpack#0.1.8 to the package cache Fetching: Installing hl7.fhir.pubpack#0.1.8 done. Load Package hl7.fhir.pubpack#0.1.8 Installing hl7.fhir.xver-extensions#0.1.0 to the package cache Fetching: Installing hl7.fhir.xver-extensions#0.1.0 done. Load Package hl7.fhir.xver-extensions#0.1.0 Installing hl7.fhir.uv.extensions.r4#1.0.0 to the package cache Fetching: Installing hl7.fhir.uv.extensions.r4#1.0.0 done. Load Package hl7.fhir.uv.extensions.r4#1.0.0 Load Package hl7.terminology#5.5.0 Load Package hl7.fhir.uv.extensions.r4#5.1.0 Load Package hl7.fhir.uv.cql#1.0.0 Load Package hl7.fhir.uv.crmi#1.0.0 Ignore Dependency on Core FHIR hl7.fhir.r4.examples#4.0.1, from package 'hl7.fhir.uv.sdc#3.0.0' (00:10.247 / 01:12.075, 1Gb) Load Package hl7.fhir.uv.sdc#3.0.0 Installing hl7.fhir.uv.tools.r4#0.3.0 to the package cache Fetching: Installing hl7.fhir.uv.tools.r4#0.3.0 done. Load Package hl7.fhir.uv.tools.r4#0.3.0 Load R5 Specials Installing hl7.fhir.r5.core#5.0.0 to the package cache Fetching: Installing hl7.fhir.r5.core#5.0.0 done. Initialization complete (00:05.047 / 01:17.122, 1Gb) Load Content (00:00.000 / 01:17.122, 1Gb) Using en-US as the default narrative language. (no language information in Implementation Guide or command line) (00:00.092 / 01:17.215, 1Gb) Exception in thread "main" java.lang.Error: The version 0.1.0a is not a valid semantic version so cannot be published in the ci-build at org.hl7.fhir.igtools.publisher.Publisher.load(Publisher.java:4520) at org.hl7.fhir.igtools.publisher.Publisher.createIg(Publisher.java:1228) at org.hl7.fhir.igtools.publisher.Publisher.execute(Publisher.java:1072) at org.hl7.fhir.igtools.publisher.Publisher.main(Publisher.java:13893)