GenomeX Data Exchange FHIR IG
0.2.0 - draft

GenomeX Data Exchange FHIR IG, published by MITRE. This guide is not an authorized publication; it is the continuous build for version 0.2.0 built by the FHIR (HL7® FHIR® Standard) CI Build. This version is based on the current content of https://github.com/CodeX-HL7-FHIR-Accelerator/GenomeX-DataExchange/ and changes regularly. See the Directory of published versions

Example Procedure: PrenatalGenomicStudyPatientMale

Generated Narrative: Procedure PrenatalGenomicStudyPatientMale

version: 2; Last updated: 2024-10-02 03:41:29+0000;

Information Source: #DEqMJP5Koyub2naR

Profile: Genomic Study

Genomic Study Analysis Extension: Procedure: extension = Germline,GRCh37,,,Copy number variation analysis in Blood or Tissue by Sequencing,Sequence analysis of select exons; status = completed; performed[x] = 2024-07-09; note = autosomal recessive spastic ataxia of Charlevoix-Saguenay - SACS. Autosomal recessive inheritance. sequencing with copy number analysis. Detection rate: Northern European 99%,No disease-causing mutations were detected in any other gene tested for autosomal recessive spastic ataxia of Charlevoix-Saguenay,Report content approved by PractitionerJane Smith, PhD, FACMG, CGMB on Jul 9, 2024,Report content approved by Krista Moyer, MGC on Jul 9, 2024

Genomic Study Analysis Extension: Procedure: extension = Germline,GRCh37,,,Copy number variation analysis in Blood or Tissue by Sequencing,Sequence analysis of select exons; status = completed; performed[x] = 2024-07-09; note = familial hyperinsulinism, ABCC8-related - ABCC8. Autosomal recessive inheritance. sequencing with copy number analysis. Detection rate: Northern European >99%,No disease-causing mutations were detected in any other gene tested for familial hyperinsulinism, ABCC8-related,Report content approved by PractitionerJane Smith, PhD, FACMG, CGMB on Jul 9, 2024,Report content approved by Krista Moyer, MGC on Jul 9, 2024

Genomic Study Analysis Extension: Procedure: extension = Germline,GRCh37,,,Copy number variation analysis in Blood or Tissue by Sequencing,Sequence analysis of select exons; status = completed; performed[x] = 2024-07-09; note = alpha-1 antitrypsin deficiency - SERPINA1. Autosomal recessive inheritance. sequencing with copy number analysis. Detection rate: Northern European >99%,No disease-causing mutations were detected in any other gene tested for alpha-1 antitrypsin deficiency,Report content approved by PractitionerJane Smith, PhD, FACMG, CGMB on Jul 9, 2024,Report content approved by Krista Moyer, MGC on Jul 9, 2024

status: Completed

category: Laboratory

subject: Higado Sobreviviente (official) Male, DoB: 1996-05-13 ( Patient ID: fec6172efdca41b4a13341e75cb62e0f (use: official, ))

performed: 2024-07-09

reasonCode: Pregnant - planned (finding)

note: The <b>Organization Prenatal Carrier Screen</b> utilizes sequencing, maximizing coverage across all DNA regions tested, to help you learn about your chance to have a child with a genetic disease.