FHIR CI-Build

This is the Continuous Integration Build of FHIR (will be incorrect/inconsistent at times).
See the Directory of published versions

Example CodeSystem/sequence-type (XML)

Clinical Genomics Work GroupMaturity Level: N/AStandards Status: Informative

Raw XML (canonical form + also see XML Format Specification)

Definition for Code SystemSequenceType

<?xml version="1.0" encoding="UTF-8"?>

<CodeSystem xmlns="http://hl7.org/fhir">
  <id value="sequence-type"/> 
  <meta> 
    <lastUpdated value="2024-11-10T01:23:12.156+00:00"/> 
    <profile value="http://hl7.org/fhir/StructureDefinition/shareablecodesystem"/> 
  </meta> 
  <text> 
    <status value="generated"/> 
    <div xmlns="http://www.w3.org/1999/xhtml">
      <p class="res-header-id">
        <b> Generated Narrative: CodeSystem sequence-type</b> 
      </p> 
      <a name="sequence-type"> </a> 
      <a name="hcsequence-type"> </a> 
      <a name="sequence-type-en-US"> </a> 
      <p> This case-sensitive code system 
        <code> http://hl7.org/fhir/sequence-type</code>  defines the following codes:
      </p> 
      <table class="codes">
        <tr> 
          <td style="white-space:nowrap">
            <b> Code</b> 
          </td> 
          <td> 
            <b> Display</b> 
          </td> 
          <td> 
            <b> Definition</b> 
          </td> 
        </tr> 
        <tr> 
          <td style="white-space:nowrap">aa
            <a name="sequence-type-aa"> </a> 
          </td> 
          <td> AA Sequence</td> 
          <td> Amino acid sequence.</td> 
        </tr> 
        <tr> 
          <td style="white-space:nowrap">dna
            <a name="sequence-type-dna"> </a> 
          </td> 
          <td> DNA Sequence</td> 
          <td> DNA Sequence.</td> 
        </tr> 
        <tr> 
          <td style="white-space:nowrap">rna
            <a name="sequence-type-rna"> </a> 
          </td> 
          <td> RNA Sequence</td> 
          <td> RNA Sequence.</td> 
        </tr> 
      </table> 
    </div> 
  </text> 
  <extension url="http://hl7.org/fhir/StructureDefinition/structuredefinition-wg">
    <valueCode value="cg"/> 
  </extension> 
  <extension url="http://hl7.org/fhir/StructureDefinition/structuredefinition-standards-status">
    <valueCode value="trial-use"/> 
  </extension> 
  <extension url="http://hl7.org/fhir/StructureDefinition/structuredefinition-fmm">
    <valueInteger value="1"/> 
  </extension> 
  <url value="http://hl7.org/fhir/sequence-type"/> 
  <identifier> 
    <system value="urn:ietf:rfc:3986"/> 
    <value value="urn:oid:2.16.840.1.113883.4.642.4.220"/> 
  </identifier> 
  <identifier> 
    <use value="old"/> 
    <system value="urn:ietf:rfc:3986"/> 
    <value value="urn:oid:2.16.840.1.113883.4.642.1.215"/> 
  </identifier> 
  <version value="6.0.0-ballot2"/> 
  <name value="SequenceType"/> 
  <title value="sequence Type"/> 
  <status value="active"/> 
  <experimental value="false"/> 
  <date value="2021-01-05T10:01:24+11:00"/> 
  <publisher value="HL7 (FHIR Project)"/> 
  <contact> 
    <telecom> 
      <system value="url"/> 
      <value value="http://hl7.org/fhir"/> 
    </telecom> 
    <telecom> 
      <system value="email"/> 
      <value value="fhir@lists.hl7.org"/> 
    </telecom> 
  </contact> 
  <description value="Type if a sequence -- DNA, RNA, or amino acid sequence."/> 
  <jurisdiction> 
    <coding> 
      <system value="http://unstats.un.org/unsd/methods/m49/m49.htm"/> 
      <code value="001"/> 
      <display value="World"/> 
    </coding> 
  </jurisdiction> 
  <caseSensitive value="true"/> 
  <valueSet value="http://hl7.org/fhir/ValueSet/sequence-type"/> 
  <content value="complete"/> 
  <concept> 
    <code value="aa"/> 
    <display value="AA Sequence"/> 
    <definition value="Amino acid sequence."/> 
  </concept> 
  <concept> 
    <code value="dna"/> 
    <display value="DNA Sequence"/> 
    <definition value="DNA Sequence."/> 
  </concept> 
  <concept> 
    <code value="rna"/> 
    <display value="RNA Sequence"/> 
    <definition value="RNA Sequence."/> 
  </concept> 
</CodeSystem> 

Usage note: every effort has been made to ensure that the examples are correct and useful, but they are not a normative part of the specification.