Moleculardefinition-example-sequence-cyp2c19-Concatenated-regions.xml

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Example MolecularDefinition/example-sequence-cyp2c19-Concatenated-regions (XML)

Clinical Genomics Work Group

Maturity Level: N/A

Standards Status: Informative

Compartments: No defined compartments

Raw XML (canonical form + also see XML Format Specification)

Example of Sequence profile of CYP2C19 of concatenated upstream, gene, and downstream regions (id = "example-sequence-cyp2c19-Concatenated-regions")

<?xml version="1.0" encoding="UTF-8"?>

<MolecularDefinition xmlns="http://hl7.org/fhir">
  <id value="example-sequence-cyp2c19-Concatenated-regions"/> 
  <meta> 
    <profile value="http://hl7.org/fhir/StructureDefinition/sequence"/> 
  </meta> 
  <type value="dna"/> 
  <representation> 
    <concatenated> 
      <sequenceElement> 
        <sequence> 
          <reference value="MolecularDefinition/example-sequence-cyp2c19-upstream-region"/> 
          <type value="MolecularDefinition"/> 
          <display value="Sequence CYP2C19 Upstream Region"/> 
        </sequence> 
        <ordinalIndex value="0"/> 
      </sequenceElement> 
      <sequenceElement> 
        <sequence> 
          <reference value="MolecularDefinition/example-sequence-cyp2c19-gene-region"/> 
          <type value="MolecularDefinition"/> 
          <display value="Sequence CYP2C19 Gene Region"/> 
        </sequence> 
        <ordinalIndex value="1"/> 
      </sequenceElement> 
      <sequenceElement> 
        <sequence> 
          <reference value="MolecularDefinition/example-sequence-cyp2c19-downstream-region"/> 
          <type value="MolecularDefinition"/> 
          <display value="Sequence CYP2C19 Downstream Region"/> 
        </sequence> 
        <ordinalIndex value="2"/> 
      </sequenceElement> 
    </concatenated> 
  </representation> 
</MolecularDefinition>

Usage note: every effort has been made to ensure that the examples are correct and useful, but they are not a normative part of the specification.