Moleculardefinition-example-sequence-cyp2c19-Concatenated-regions.json

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Example MolecularDefinition/example-sequence-cyp2c19-Concatenated-regions (JSON)

Clinical Genomics Work Group

Maturity Level: N/A

Standards Status: Informative

Compartments: No defined compartments

Raw JSON (canonical form + also see JSON Format Specification)

Example of Sequence of CYP2C19 of concatenated upstream, gene, and downstream regions

{
  "resourceType" : "MolecularDefinition",
  "id" : "example-sequence-cyp2c19-Concatenated-regions",
  "moleculeType" : {
    "coding" : [{
      "system" : "http://hl7.org/fhir/sequence-type",
      "code" : "dna",
      "display" : "DNA Sequence"
    }]
  },
  "representation" : [{
    "concatenated" : {
      "sequenceElement" : [{
        "sequence" : {
          "reference" : "MolecularDefinition/example-sequence-cyp2c19-upstream-region",
          "type" : "MolecularDefinition",
          "display" : "Sequence CYP2C19 Upstream Region"
        },
        "ordinalIndex" : 0
      },
      {
        "sequence" : {
          "reference" : "MolecularDefinition/example-sequence-cyp2c19-gene-region",
          "type" : "MolecularDefinition",
          "display" : "Sequence CYP2C19 Gene Region"
        },
        "ordinalIndex" : 1
      },
      {
        "sequence" : {
          "reference" : "MolecularDefinition/example-sequence-cyp2c19-downstream-region",
          "type" : "MolecularDefinition",
          "display" : "Sequence CYP2C19 Downstream Region"
        },
        "ordinalIndex" : 2
      }]
    }
  }]
}

Usage note: every effort has been made to ensure that the examples are correct and useful, but they are not a normative part of the specification.