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Specimen-example.ttl

Orders and Observations Work GroupMaturity Level: N/AStandards Status: InformativeCompartments: Device, Patient, Practitioner

Raw Turtle (+ also see Turtle/RDF Format Specification)

General Specimen Example

@prefix fhir: <http://hl7.org/fhir/> .
@prefix owl: <http://www.w3.org/2002/07/owl#> .
@prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> .
@prefix sct: <http://snomed.info/id/> .
@prefix xsd: <http://www.w3.org/2001/XMLSchema#> .

# - resource -------------------------------------------------------------------

<http://hl7.org/fhir/Specimen/101> a fhir:Specimen;
  fhir:nodeRole fhir:treeRoot;
  fhir:Resource.id [ fhir:value "101"];
  fhir:DomainResource.text [
     fhir:Narrative.status [ fhir:value "generated" ];
     fhir:Narrative.div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative</b></p><p><b>identifier</b>: id: 23234352356</p><p><b>accessionIdentifier</b>: id: X352356</p><p><b>status</b>: available</p><p><b>type</b>: <span>Venous blood specimen</span></p><p><b>subject</b>: <a>Peter Patient. Generated Summary: Medical record number: 12345 (USUAL); active: true; Peter James Chalmers (OFFICIAL), Jim , Peter James Windsor (MAIDEN); , Phone: (03) 5555 6473, Phone: (03) 3410 5613, Phone: (03) 5555 8834; gender: male; birthDate: 1974-12-25; deceased: false</a></p><p><b>receivedTime</b>: Mar 4, 2011 7:03:00 AM</p><p><b>request</b>: <a>Generated Summary: status: completed; intent: order; <span>Diagnostics Procedure</span>; <span>Computed tomography of head</span></a></p><blockquote><p><b>collection</b></p><p><b>collector</b>: <a>Generated Summary: id: 23; active: true; Adam Careful </a></p><p><b>collected</b>: May 30, 2011 6:15:00 AM</p><p><b>quantity</b>: 6 mL</p><p><b>method</b>: <span>Line, Venous</span></p></blockquote><h3>Containers</h3><table><tr><td>-</td><td><b>Identifier</b></td><td><b>Description</b></td><td><b>Type</b></td><td><b>Capacity</b></td><td><b>SpecimenQuantity</b></td><td><b>Additive[x]</b></td></tr><tr><td>*</td><td>id: 48736-15394-75465</td><td>Green Gel tube</td><td><span>Vacutainer</span></td><td>10 mL</td><td>6 mL</td><td><a> </a><blockquote><p><b>instance</b>: false</p></blockquote></td></tr></table><p><b>note</b>: Specimen is grossly lipemic</p></div>"
  ];
  fhir:DomainResource.contained [
     a fhir:Substance;
     fhir:index 0;
     fhir:Resource.id [ fhir:value "hep" ];
     fhir:Substance.instance [ fhir:value "false"^^xsd:boolean ];
     fhir:Substance.code [
       fhir:CodeableReference.concept [
         fhir:CodeableConcept.coding [
           fhir:index 0;
           fhir:Coding.system [ fhir:value "http://terminology.hl7.org/CodeSystem/v3-EntityCode" ];
           fhir:Coding.code [ fhir:value "HEPL" ]
         ]
       ]
     ]
  ];
  fhir:Specimen.identifier [
     fhir:index 0;
     fhir:Identifier.system [ fhir:value "http://ehr.acme.org/identifiers/collections" ];
     fhir:Identifier.value [ fhir:value "23234352356" ]
  ];
  fhir:Specimen.accessionIdentifier [
     fhir:Identifier.system [ fhir:value "http://lab.acme.org/specimens/2011" ];
     fhir:Identifier.value [ fhir:value "X352356" ]
  ];
  fhir:Specimen.status [ fhir:value "available"];
  fhir:Specimen.type [
     fhir:CodeableConcept.coding [
       fhir:index 0;
       a sct:122555007;
       fhir:Coding.system [ fhir:value "http://snomed.info/sct" ];
       fhir:Coding.code [ fhir:value "122555007" ];
       fhir:Coding.display [ fhir:value "Venous blood specimen" ]
     ]
  ];
  fhir:Specimen.subject [
     fhir:link <http://hl7.org/fhir/Patient/example>;
     fhir:Reference.reference [ fhir:value "Patient/example" ];
     fhir:Reference.display [ fhir:value "Peter Patient" ]
  ];
  fhir:Specimen.receivedTime [ fhir:value "2011-03-04T07:03:00Z"^^xsd:dateTime];
  fhir:Specimen.request [
     fhir:index 0;
     fhir:link <http://hl7.org/fhir/ServiceRequest/example>;
     fhir:Reference.reference [ fhir:value "ServiceRequest/example" ]
  ];
  fhir:Specimen.collection [
     fhir:Specimen.collection.collector [
       fhir:link <http://hl7.org/fhir/Practitioner/example>;
       fhir:Reference.reference [ fhir:value "Practitioner/example" ]
     ];
     fhir:Specimen.collection.collectedDateTime [ fhir:value "2011-05-30T06:15:00Z"^^xsd:dateTime ];
     fhir:Specimen.collection.quantity [
       fhir:Quantity.value [ fhir:value "6"^^xsd:decimal ];
       fhir:Quantity.unit [ fhir:value "mL" ]
     ];
     fhir:Specimen.collection.method [
       fhir:CodeableConcept.coding [
         fhir:index 0;
         fhir:Coding.system [ fhir:value "http://terminology.hl7.org/CodeSystem/v2-0488" ];
         fhir:Coding.code [ fhir:value "LNV" ]
       ]
     ];
     fhir:Specimen.collection.bodySite [
       fhir:CodeableReference.concept [
         fhir:CodeableConcept.coding [
           fhir:index 0;
           a sct:49852007;
           fhir:Coding.system [ fhir:value "http://snomed.info/sct" ];
           fhir:Coding.code [ fhir:value "49852007" ];
           fhir:Coding.display [ fhir:value "Structure of median cubital vein (body structure)" ]
         ]
       ]
     ]
  ];
  fhir:Specimen.container [
     fhir:index 0;
     fhir:Specimen.container.identifier [
       fhir:index 0;
       fhir:Identifier.value [ fhir:value "48736-15394-75465" ]
     ];
     fhir:Specimen.container.description [ fhir:value "Green Gel tube" ];
     fhir:Specimen.container.type [
       fhir:CodeableConcept.text [ fhir:value "Vacutainer" ]
     ];
     fhir:Specimen.container.capacity [
       fhir:Quantity.value [ fhir:value "10"^^xsd:decimal ];
       fhir:Quantity.unit [ fhir:value "mL" ]
     ];
     fhir:Specimen.container.specimenQuantity [
       fhir:Quantity.value [ fhir:value "6"^^xsd:decimal ];
       fhir:Quantity.unit [ fhir:value "mL" ]
     ];
     fhir:Specimen.container.additiveReference [
       fhir:Reference.reference [ fhir:value "#hep" ]
     ]
  ];
  fhir:Specimen.note [
     fhir:index 0;
     fhir:Annotation.text [ fhir:value "Specimen is grossly lipemic" ]
  ] .

<http://hl7.org/fhir/Patient/example> a fhir:Patient .

<http://hl7.org/fhir/ServiceRequest/example> a fhir:ServiceRequest .

<http://hl7.org/fhir/Practitioner/example> a fhir:Practitioner .

# - ontology header ------------------------------------------------------------

<http://hl7.org/fhir/Specimen/101.ttl> a owl:Ontology;
  owl:imports fhir:fhir.ttl;
  owl:versionIRI <http://build.fhir.org/Specimen/101.ttl> .

# -------------------------------------------------------------------------------------


Usage note: every effort has been made to ensure that the examples are correct and useful, but they are not a normative part of the specification.