INFO:root:about to clone! DEBUG:root:running: git clone --recursive https://github.com/medcomdk/dk-medcom-document --branch GitHubPagesMaster-2025-08-21-ECG repo DEBUG:root:Time to deadline 35879.998223 seconds Cloning into 'repo'... DEBUG:root:running: wget -q https://github.com/HL7/fhir-ig-publisher/releases/latest/download/publisher.jar -O publisher.jar DEBUG:root:Time to deadline 35879.581356 seconds DEBUG:root:running: npm -g install fsh-sushi DEBUG:root:Time to deadline 35878.562966 seconds npm WARN deprecated glob@7.2.3: Glob versions prior to v9 are no longer supported npm WARN deprecated inflight@1.0.6: This module is not supported, and leaks memory. Do not use it. Check out lru-cache if you want a good and tested way to coalesce async requests by a key value, which is much more comprehensive and powerful. npm WARN deprecated rimraf@2.6.3: Rimraf versions prior to v4 are no longer supported added 140 packages in 5s 15 packages are looking for funding run `npm fund` for details npm notice npm notice New major version of npm available! 9.8.1 -> 11.5.2 npm notice Changelog: npm notice Run `npm install -g npm@11.5.2` to update! npm notice DEBUG:root:running: java -Xms19000m -Xmx19000m -jar ../publisher.jar -ig ig.json -api-key-file /etc/ig.builder.keyfile.ini -fhir-settings /etc/fhir-settings.json -auto-ig-build -tx http://tx.fhir.org -target https://build.fhir.org/ig/medcomdk/dk-medcom-document/ -out /scratch/repo DEBUG:root:Time to deadline 35872.871092 seconds FHIR IG Publisher Version 2.0.13 (Git# bdf473444570). Built 2025-08-07T03:35:38.89Z (14 days old) Detected Java version: 21-ea from /usr/local/openjdk-21 on Linux/amd64 (64bit). 19008MB available dir = /scratch/repo, path = /usr/local/openjdk-21/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin Parameters: -ig ig.json -api-key-file /etc/ig.builder.keyfile.ini -fhir-settings /etc/fhir-settings.json -auto-ig-build -tx http://tx.fhir.org -target https://build.fhir.org/ig/medcomdk/dk-medcom-document/ -out /scratch/repo Character encoding = UTF-8 / UTF-8 Start Clock @ Thursday, August 21, 2025, 5:46:16 AM Coordinated Universal Time (2025-08-21T05:46:16Z) Build FHIR IG from /scratch/repo (00:00.029 / 00:00.029, 97Mb) API keys loaded from /etc/fhir-settings.json (00:00.002 / 00:00.031, 97Mb) Package Cache: /var/lib/.fhir/packages (00:00.002 / 00:00.034, 97Mb) Found dependency on medcom.fhir.dk.core#2.1.0 in Sushi config. Pre-installing (00:00.005 / 00:00.039, 97Mb) Installing medcom.fhir.dk.core#2.1.0 to the package cache  Fetching:  Installing medcom.fhir.dk.core#2.1.0  done. Found dependency on hl7.fhir.dk.core#2.2.0 in Sushi config. Pre-installing (00:01.425 / 00:01.464, 55Mb) Installing hl7.fhir.dk.core#2.2.0 to the package cache  Fetching:  Installing hl7.fhir.dk.core#2.2.0  done. Run Sushi on /scratch/repo (00:00.558 / 00:02.023, 64Mb) Sushi: info Running SUSHI v3.16.3 (implements FHIR Shorthand specification v3.0.0) (00:00.691 / 00:02.714, 72Mb) Sushi: info Arguments: (00:00.000 / 00:02.715, 72Mb) Sushi: info --require-latest (00:00.000 / 00:02.715, 72Mb) Sushi: info --out /scratch/repo (00:00.000 / 00:02.715, 72Mb) Sushi: info /scratch/repo (00:00.000 / 00:02.716, 72Mb) Sushi: info Using configuration file: /scratch/repo/sushi-config.yaml (00:00.721 / 00:03.437, 72Mb) Sushi: info Importing FSH text... (00:00.138 / 00:03.576, 72Mb) Sushi: info Preprocessed 10 documents with 48 aliases. (00:00.162 / 00:03.738, 72Mb) Sushi: info Imported 8 definitions and 3 instances. (00:00.012 / 00:03.750, 72Mb) Sushi: info Loaded virtual package sushi-r5forR4#1.0.0 with 7 resources (00:00.151 / 00:03.902, 72Mb) Sushi: info Resolved hl7.fhir.uv.tools.r4#latest to concrete version 0.8.0 (00:00.659 / 00:04.562, 72Mb) Sushi: info Attempting to download hl7.fhir.uv.tools.r4#0.8.0 from https://packages.fhir.org/hl7.fhir.uv.tools.r4/0.8.0 (00:00.001 / 00:04.563, 72Mb) Sushi: info Downloaded hl7.fhir.uv.tools.r4#0.8.0 (00:00.901 / 00:05.464, 72Mb) Sushi: info Cached hl7.fhir.uv.tools.r4#0.8.0 to /home/fhiruser/.fhir/packages/hl7.fhir.uv.tools.r4#0.8.0 (00:00.003 / 00:05.467, 72Mb) Sushi: info Loaded hl7.fhir.uv.tools.r4#0.8.0 with 110 resources (00:00.077 / 00:05.544, 72Mb) Sushi: info Resolved hl7.terminology.r4#latest to concrete version 6.5.0 (00:00.493 / 00:06.038, 72Mb) Sushi: info Attempting to download hl7.terminology.r4#6.5.0 from https://packages.fhir.org/hl7.terminology.r4/6.5.0 (00:00.000 / 00:06.038, 72Mb) Sushi: info Downloaded hl7.terminology.r4#6.5.0 (00:02.756 / 00:08.795, 72Mb) Sushi: info Cached hl7.terminology.r4#6.5.0 to /home/fhiruser/.fhir/packages/hl7.terminology.r4#6.5.0 (00:00.001 / 00:08.796, 72Mb) Sushi: info Loaded hl7.terminology.r4#6.5.0 with 4392 resources (00:01.444 / 00:10.241, 72Mb) Sushi: info Resolved hl7.fhir.uv.extensions.r4#latest to concrete version 5.2.0 (00:00.462 / 00:10.703, 72Mb) Sushi: info Attempting to download hl7.fhir.uv.extensions.r4#5.2.0 from https://packages.fhir.org/hl7.fhir.uv.extensions.r4/5.2.0 (00:00.000 / 00:10.704, 72Mb) Sushi: info Downloaded hl7.fhir.uv.extensions.r4#5.2.0 (00:01.413 / 00:12.118, 80Mb) Sushi: info Cached hl7.fhir.uv.extensions.r4#5.2.0 to /home/fhiruser/.fhir/packages/hl7.fhir.uv.extensions.r4#5.2.0 (00:00.001 / 00:12.119, 80Mb) Sushi: info Loaded hl7.fhir.uv.extensions.r4#5.2.0 with 759 resources (00:00.274 / 00:12.394, 80Mb) Sushi: info Loaded medcom.fhir.dk.core#2.1.0 with 10 resources (00:00.009 / 00:12.404, 80Mb) Sushi: info Loaded hl7.fhir.dk.core#2.2.0 with 40 resources (00:00.020 / 00:12.424, 80Mb) Sushi: info Attempting to download hl7.fhir.r4.core#4.0.1 from https://packages.fhir.org/hl7.fhir.r4.core/4.0.1 (00:00.000 / 00:12.425, 80Mb) Sushi: info Downloaded hl7.fhir.r4.core#4.0.1 (00:03.022 / 00:15.447, 80Mb) Sushi: info Cached hl7.fhir.r4.core#4.0.1 to /home/fhiruser/.fhir/packages/hl7.fhir.r4.core#4.0.1 (00:00.002 / 00:15.449, 80Mb) Sushi: info Loaded hl7.fhir.r4.core#4.0.1 with 4581 resources (00:01.372 / 00:16.822, 80Mb) Sushi: info Loaded virtual package sushi-local#LOCAL with 0 resources (00:00.017 / 00:16.839, 80Mb) Sushi: info Converting FSH to FHIR resources... (00:00.023 / 00:16.863, 80Mb) Sushi: info Converted 8 FHIR StructureDefinitions. (00:00.733 / 00:17.596, 80Mb) Sushi: info Converted 3 FHIR instances. (00:00.238 / 00:17.835, 80Mb) Sushi: info Exporting FHIR resources as JSON... (00:00.000 / 00:17.836, 80Mb) Sushi: info Exported 11 FHIR resources as JSON. (00:00.054 / 00:17.890, 80Mb) Sushi: info Assembling Implementation Guide sources... (00:00.001 / 00:17.892, 80Mb) Sushi: info Generated ImplementationGuide-medcom.fhir.dk.document.json (00:00.051 / 00:17.944, 80Mb) Sushi: info Assembled Implementation Guide sources; ready for IG Publisher. (00:00.000 / 00:17.944, 80Mb) Sushi: ========================= SUSHI RESULTS =========================== (00:00.001 / 00:17.945, 80Mb) Sushi: | ------------------------------------------------------------- | (00:00.000 / 00:17.946, 80Mb) Sushi: | | Profiles | Extensions | Logicals | Resources | | (00:00.000 / 00:17.946, 80Mb) Sushi: | |-------------------------------------------------------------| | (00:00.000 / 00:17.946, 80Mb) Sushi: | | 6 | 2 | 0 | 0 | | (00:00.000 / 00:17.946, 80Mb) Sushi: | ------------------------------------------------------------- | (00:00.000 / 00:17.947, 80Mb) Sushi: | ------------------------------------------------------------- | (00:00.000 / 00:17.947, 80Mb) Sushi: | | ValueSets | CodeSystems | Instances | | (00:00.000 / 00:17.947, 80Mb) Sushi: | |-------------------------------------------------------------| | (00:00.000 / 00:17.947, 80Mb) Sushi: | | 0 | 0 | 3 | | (00:00.000 / 00:17.948, 80Mb) Sushi: | ------------------------------------------------------------- | (00:00.000 / 00:17.948, 80Mb) Sushi: | | (00:00.000 / 00:17.948, 80Mb) Sushi: =================================================================== (00:00.000 / 00:17.948, 80Mb) Sushi: | That was a big fish to fry! 0 Errors 0 Warnings | (00:00.000 / 00:17.949, 80Mb) Sushi: =================================================================== (00:00.000 / 00:17.949, 80Mb) Root directory: /scratch/repo (00:00.018 / 00:17.968, 80Mb) Unable to load IG as an r5 IG - try R4 (property code is a class com.google.gson.JsonPrimitive looking for an object) (00:00.642 / 00:18.610, 56Mb) Load Template from https://github.com/hl7dk/medcom-ig-template (00:00.553 / 00:19.164, 65Mb) Load Template from fhir.base.template#current (00:00.421 / 00:19.585, 73Mb) Installing fhir.base.template#current to the package cache  Fetching:  Installing fhir.base.template#current  done. Terminology Cache is at /scratch/repo/input-cache/txcache. Trimming now (00:05.111 / 00:24.696, 392Mb) Core Package hl7.fhir.r4.core#4.0.1 (00:00.000 / 00:24.697, 392Mb) Running Terminology Log: /tmp/ohfu-fhir-ig-16026407350966511718.html Connect to Terminology Server at http://tx.fhir.org (00:27.803 / 00:52.500, 262Mb) Installing hl7.fhir.pubpack#0.2.3 to the package cache  Fetching:  Installing hl7.fhir.pubpack#0.2.3  done. Load Package hl7.fhir.pubpack#0.2.3 Installing hl7.fhir.xver-extensions#0.1.0 to the package cache  Fetching:  Installing hl7.fhir.xver-extensions#0.1.0  done. Load Package hl7.fhir.xver-extensions#0.1.0 Load Package hl7.terminology.r4#6.5.0 Load Package hl7.fhir.uv.extensions.r4#5.2.0 Installing hl7.terminology.r4#5.0.0 to the package cache  Fetching:  Installing hl7.terminology.r4#5.0.0  done. Load Package hl7.terminology.r4#5.0.0 Installing hl7.fhir.dk.core#2.0.0 to the package cache  Fetching:  Installing hl7.fhir.dk.core#2.0.0  done. Installing hl7.terminology.r4#3.1.0 to the package cache  Fetching:  Installing hl7.terminology.r4#3.1.0  done. Load Package hl7.terminology.r4#3.1.0 Load Package hl7.fhir.dk.core#2.0.0 Installing medcom.fhir.dk.terminology#1.1.0 to the package cache  Fetching:  Installing medcom.fhir.dk.terminology#1.1.0  done. Load Package medcom.fhir.dk.terminology#1.1.0 Load Package medcom.fhir.dk.core#2.1.0 Installing hl7.fhir.uv.phd#1.0.0 to the package cache  Fetching:  Installing hl7.fhir.uv.phd#1.0.0  done. Load Package hl7.fhir.uv.phd#1.0.0 Load Package hl7.fhir.dk.core#2.2.0 Installing hl7.fhir.uv.tools.r4#0.7.1 to the package cache  Fetching:  Installing hl7.fhir.uv.tools.r4#0.7.1  done. Load Package hl7.fhir.uv.tools.r4#0.7.1 Load R5 Specials Installing hl7.fhir.r5.core#5.0.0 to the package cache  Fetching:  Installing hl7.fhir.r5.core#5.0.0  done. Initialization complete (00:58.312 / 01:50.812, 677Mb) Load IG (00:00.000 / 01:50.812, 677Mb) Load Content (00:00.000 / 01:50.813, 677Mb) Using en-US as the default narrative language. (no language information in Implementation Guide) (00:00.079 / 01:50.892, 685Mb) Process Loaded Resources (00:00.541 / 01:51.433, 701Mb) Generating Snapshots (00:00.133 / 01:51.566, 717Mb) Exception in thread "main" java.lang.Error: Error in profile http://medcomfhir.dk/ig/document/StructureDefinition/medcom-documentreference at DocumentReference.extension: Base isSummary = false, derived isSummary = true at org.hl7.fhir.r5.conformance.profile.ProfileUtilities.updateFromDefinition(ProfileUtilities.java:2998) at org.hl7.fhir.r5.conformance.profile.ProfilePathProcessor.processSimplePathWithOneMatchingElementInDifferential(ProfilePathProcessor.java:803) at org.hl7.fhir.r5.conformance.profile.ProfilePathProcessor.processSimplePath(ProfilePathProcessor.java:294) at org.hl7.fhir.r5.conformance.profile.ProfilePathProcessor.processPaths(ProfilePathProcessor.java:209) at org.hl7.fhir.r5.conformance.profile.ProfilePathProcessor.processSimplePathDefault(ProfilePathProcessor.java:440) at org.hl7.fhir.r5.conformance.profile.ProfilePathProcessor.processSimplePath(ProfilePathProcessor.java:298) at org.hl7.fhir.r5.conformance.profile.ProfilePathProcessor.processPaths(ProfilePathProcessor.java:209) at org.hl7.fhir.r5.conformance.profile.ProfilePathProcessor.processPaths(ProfilePathProcessor.java:179) at org.hl7.fhir.r5.conformance.profile.ProfileUtilities.generateSnapshot(ProfileUtilities.java:813) at org.hl7.fhir.igtools.publisher.Publisher.generateSnapshot(Publisher.java:8125) at org.hl7.fhir.igtools.publisher.Publisher.generateSnapshots(Publisher.java:7895) at org.hl7.fhir.igtools.publisher.Publisher.loadConformance1(Publisher.java:6397) at org.hl7.fhir.igtools.publisher.Publisher.load(Publisher.java:4904) at org.hl7.fhir.igtools.publisher.Publisher.createIg(Publisher.java:1163) at org.hl7.fhir.igtools.publisher.Publisher.execute(Publisher.java:1026) at org.hl7.fhir.igtools.publisher.Publisher.main(Publisher.java:15790)