INFO:root:about to clone! DEBUG:root:running: git clone --recursive https://github.com/hl7-be/vaccination --branch master repo DEBUG:root:Time to deadline 35879.997736 seconds Cloning into 'repo'... DEBUG:root:running: wget -q https://github.com/HL7/fhir-ig-publisher/releases/latest/download/publisher.jar -O publisher.jar DEBUG:root:Time to deadline 35879.680861 seconds DEBUG:root:running: npm -g install fsh-sushi DEBUG:root:Time to deadline 35878.459766 seconds npm WARN deprecated inflight@1.0.6: This module is not supported, and leaks memory. Do not use it. Check out lru-cache if you want a good and tested way to coalesce async requests by a key value, which is much more comprehensive and powerful. npm WARN deprecated glob@7.2.3: Glob versions prior to v9 are no longer supported npm WARN deprecated rimraf@2.6.3: Rimraf versions prior to v4 are no longer supported added 139 packages in 5s 14 packages are looking for funding run `npm fund` for details npm notice npm notice New major version of npm available! 9.8.1 -> 11.6.4 npm notice Changelog: npm notice Run `npm install -g npm@11.6.4` to update! npm notice DEBUG:root:running: java -Xms19000m -Xmx19000m -jar ../publisher.jar -ig ig.json -api-key-file /etc/ig.builder.keyfile.ini -fhir-settings /etc/fhir-settings.json -auto-ig-build -tx http://tx.fhir.org -target https://build.fhir.org/ig/hl7-be/vaccination/ -out /scratch/repo DEBUG:root:Time to deadline 35873.169375 seconds FHIR IG Publisher Version 2.0.27 (Git# 07050daf807f). Built 2025-11-28T20:03:59.255Z (3 days old) Detected Java version: 21-ea from /usr/local/openjdk-21 on Linux/amd64 (64bit). 19008MB available dir = /scratch/repo, path = /usr/local/openjdk-21/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin Parameters: -ig ig.json -api-key-file /etc/ig.builder.keyfile.ini -fhir-settings /etc/fhir-settings.json -auto-ig-build -tx http://tx.fhir.org -target https://build.fhir.org/ig/hl7-be/vaccination/ -out /scratch/repo Character encoding = UTF-8 / UTF-8 Start Clock @ Tuesday, December 2, 2025, 8:49:46 AM Coordinated Universal Time (2025-12-02T08:49:46Z) Build FHIR IG from /scratch/repo (00:00.022 / 00:00.022, 97Mb) API keys loaded from /etc/fhir-settings.json (00:00.002 / 00:00.024, 97Mb) Package Cache: /var/lib/.fhir/packages (00:00.002 / 00:00.027, 97Mb) Found dependency on hl7.fhir.be.core#2.1.2 in Sushi config. Pre-installing (00:00.007 / 00:00.035, 97Mb) Installing hl7.fhir.be.core#2.1.2 to the package cache  Fetching:  Installing hl7.fhir.be.core#2.1.2  done. Found dependency on hl7.fhir.be.medication#1.0.0 in Sushi config. Pre-installing (00:01.285 / 00:01.321, 55Mb) Installing hl7.fhir.be.medication#1.0.0 to the package cache  Fetching:  Installing hl7.fhir.be.medication#1.0.0  done. Found dependency on hl7.fhir.be.core-clinical#1.0.0 in Sushi config. Pre-installing (00:00.398 / 00:01.719, 56Mb) Installing hl7.fhir.be.core-clinical#1.0.0 to the package cache  Fetching:  Installing hl7.fhir.be.core-clinical#1.0.0  done. Run Sushi on /scratch/repo (00:00.417 / 00:02.137, 68Mb) Sushi: info Running SUSHI v3.16.5 (implements FHIR Shorthand specification v3.0.0) (00:00.561 / 00:02.699, 72Mb) Sushi: info Arguments: (00:00.000 / 00:02.699, 72Mb) Sushi: info --require-latest (00:00.000 / 00:02.699, 72Mb) Sushi: info --out /scratch/repo (00:00.000 / 00:02.700, 72Mb) Sushi: info /scratch/repo (00:00.000 / 00:02.700, 72Mb) Sushi: info Using configuration file: /scratch/repo/sushi-config.yaml (00:00.543 / 00:03.244, 72Mb) Sushi: info Importing FSH text... (00:00.121 / 00:03.365, 72Mb) Sushi: info Preprocessed 50 documents with 4 aliases. (00:00.351 / 00:03.716, 72Mb) Sushi: info Imported 24 definitions and 54 instances. (00:00.045 / 00:03.762, 72Mb) Sushi: info Loaded virtual package sushi-r5forR4#1.0.0 with 7 resources (00:00.124 / 00:03.886, 72Mb) Sushi: info Resolved hl7.fhir.uv.tools.r4#latest to concrete version 0.8.0 (00:00.571 / 00:04.458, 72Mb) Sushi: info Attempting to download hl7.fhir.uv.tools.r4#0.8.0 from https://packages.fhir.org/hl7.fhir.uv.tools.r4/0.8.0 (00:00.000 / 00:04.459, 72Mb) Sushi: info Downloaded hl7.fhir.uv.tools.r4#0.8.0 (00:00.832 / 00:05.291, 72Mb) Sushi: info Cached hl7.fhir.uv.tools.r4#0.8.0 to /home/fhiruser/.fhir/packages/hl7.fhir.uv.tools.r4#0.8.0 (00:00.003 / 00:05.295, 72Mb) Sushi: info Loaded hl7.fhir.uv.tools.r4#0.8.0 with 110 resources (00:00.062 / 00:05.357, 72Mb) Sushi: info Resolved hl7.terminology.r4#latest to concrete version 7.0.0 (00:00.477 / 00:05.834, 72Mb) Sushi: info Attempting to download hl7.terminology.r4#7.0.0 from https://packages.fhir.org/hl7.terminology.r4/7.0.0 (00:00.000 / 00:05.834, 72Mb) Sushi: info Downloaded hl7.terminology.r4#7.0.0 (00:02.906 / 00:08.740, 79Mb) Sushi: info Cached hl7.terminology.r4#7.0.0 to /home/fhiruser/.fhir/packages/hl7.terminology.r4#7.0.0 (00:00.001 / 00:08.742, 79Mb) Sushi: info Loaded hl7.terminology.r4#7.0.0 with 4096 resources (00:01.148 / 00:09.890, 79Mb) Sushi: info Resolved hl7.fhir.uv.extensions.r4#latest to concrete version 5.2.0 (00:00.461 / 00:10.352, 79Mb) Sushi: info Attempting to download hl7.fhir.uv.extensions.r4#5.2.0 from https://packages.fhir.org/hl7.fhir.uv.extensions.r4/5.2.0 (00:00.000 / 00:10.353, 79Mb) Sushi: info Downloaded hl7.fhir.uv.extensions.r4#5.2.0 (00:01.509 / 00:11.862, 79Mb) Sushi: info Cached hl7.fhir.uv.extensions.r4#5.2.0 to /home/fhiruser/.fhir/packages/hl7.fhir.uv.extensions.r4#5.2.0 (00:00.001 / 00:11.863, 79Mb) Sushi: info Loaded hl7.fhir.uv.extensions.r4#5.2.0 with 759 resources (00:00.223 / 00:12.086, 79Mb) Sushi: info Loaded hl7.fhir.be.core#2.1.2 with 37 resources (00:00.016 / 00:12.103, 79Mb) Sushi: info Loaded hl7.fhir.be.medication#1.0.0 with 9 resources (00:00.004 / 00:12.107, 79Mb) Sushi: info Loaded hl7.fhir.be.core-clinical#1.0.0 with 21 resources (00:00.008 / 00:12.115, 79Mb) Sushi: info Attempting to download hl7.fhir.r4.core#4.0.1 from https://packages.fhir.org/hl7.fhir.r4.core/4.0.1 (00:00.000 / 00:12.115, 79Mb) Sushi: info Downloaded hl7.fhir.r4.core#4.0.1 (00:03.289 / 00:15.405, 79Mb) Sushi: info Cached hl7.fhir.r4.core#4.0.1 to /home/fhiruser/.fhir/packages/hl7.fhir.r4.core#4.0.1 (00:00.002 / 00:15.407, 79Mb) Sushi: info Loaded hl7.fhir.r4.core#4.0.1 with 4581 resources (00:01.170 / 00:16.578, 79Mb) Sushi: info Found 1 non-JSON / non-XML file(s) in directory: /scratch/repo/input/examples. Only resource files with JSON or XML extensions are supported. To see the skipped files in the logs, use debug logging. (00:00.012 / 00:16.590, 79Mb) Sushi: info Found 1 non-JSON / non-XML file(s) in directory: /scratch/repo/input/extensions. Only resource files with JSON or XML extensions are supported. To see the skipped files in the logs, use debug logging. (00:00.000 / 00:16.591, 79Mb) Sushi: info Found 1 non-JSON / non-XML file(s) in directory: /scratch/repo/input/models. Only resource files with JSON or XML extensions are supported. To see the skipped files in the logs, use debug logging. (00:00.000 / 00:16.591, 79Mb) Sushi: info Found 1 non-JSON / non-XML file(s) in directory: /scratch/repo/input/profiles. Only resource files with JSON or XML extensions are supported. To see the skipped files in the logs, use debug logging. (00:00.000 / 00:16.591, 79Mb) Sushi: info Found 1 non-JSON / non-XML file(s) in directory: /scratch/repo/input/resources. Only resource files with JSON or XML extensions are supported. To see the skipped files in the logs, use debug logging. (00:00.000 / 00:16.591, 79Mb) Sushi: info Found 1 non-JSON / non-XML file(s) in directory: /scratch/repo/input/vocabulary. Only resource files with JSON or XML extensions are supported. To see the skipped files in the logs, use debug logging. (00:00.000 / 00:16.592, 79Mb) Sushi: info Loaded virtual package sushi-local#LOCAL with 0 resources (00:00.000 / 00:16.592, 79Mb) Sushi: info Converting FSH to FHIR resources... (00:00.026 / 00:16.618, 79Mb) Sushi: info Converted 9 FHIR StructureDefinitions. (00:00.878 / 00:17.496, 79Mb) Sushi: info Converted 6 FHIR CodeSystems. (00:00.687 / 00:18.184, 79Mb) Sushi: info Converted 9 FHIR ValueSets. (00:02.546 / 00:20.731, 79Mb) Sushi: info Converted 54 FHIR instances. (00:04.739 / 00:25.470, 79Mb) Sushi: info Exporting FHIR resources as JSON... (00:00.002 / 00:25.473, 79Mb) Sushi: info Exported 72 FHIR resources as JSON. (00:00.027 / 00:25.501, 79Mb) Sushi: info Assembling Implementation Guide sources... (00:00.002 / 00:25.503, 79Mb) Sushi: info Generated ImplementationGuide-hl7.fhir.be.vaccination.json (00:00.032 / 00:25.535, 79Mb) Sushi: info Assembled Implementation Guide sources; ready for IG Publisher. (00:00.000 / 00:25.536, 79Mb) Sushi: ========================= SUSHI RESULTS =========================== (00:00.000 / 00:25.537, 79Mb) Sushi: | ------------------------------------------------------------- | (00:00.000 / 00:25.537, 79Mb) Sushi: | | Profiles | Extensions | Logicals | Resources | | (00:00.000 / 00:25.537, 79Mb) Sushi: | |-------------------------------------------------------------| | (00:00.000 / 00:25.537, 79Mb) Sushi: | | 1 | 6 | 2 | 0 | | (00:00.000 / 00:25.537, 79Mb) Sushi: | ------------------------------------------------------------- | (00:00.000 / 00:25.537, 79Mb) Sushi: | ------------------------------------------------------------- | (00:00.000 / 00:25.537, 79Mb) Sushi: | | ValueSets | CodeSystems | Instances | | (00:00.000 / 00:25.538, 79Mb) Sushi: | |-------------------------------------------------------------| | (00:00.000 / 00:25.538, 79Mb) Sushi: | | 9 | 6 | 54 | | (00:00.000 / 00:25.538, 79Mb) Sushi: | ------------------------------------------------------------- | (00:00.000 / 00:25.538, 79Mb) Sushi: | | (00:00.000 / 00:25.538, 79Mb) Sushi: =================================================================== (00:00.000 / 00:25.539, 79Mb) Sushi: | You're in the swim of things now! 0 Errors 0 Warnings | (00:00.000 / 00:25.539, 79Mb) Sushi: =================================================================== (00:00.000 / 00:25.539, 79Mb) Root directory: /scratch/repo (00:00.027 / 00:25.567, 79Mb) Unable to load IG as an r5 IG - try R4 (property code is a class com.google.gson.JsonPrimitive looking for an object) (00:00.519 / 00:26.086, 56Mb) Load Template from hl7.be.fhir.template.ehealth#current (00:00.466 / 00:26.553, 57Mb) Installing hl7.be.fhir.template.ehealth#current to the package cache  Fetching:  Installing hl7.be.fhir.template.ehealth#current  done.  Load Template from fhir.base.template#1.0.0 (00:00.599 / 00:27.152, 97Mb) Installing fhir.base.template#1.0.0 to the package cache  Fetching:  Installing fhir.base.template#1.0.0  done. Scanning directory: /scratch/repo/template ====================================================================== Terminology Cache is at /scratch/repo/input-cache/txcache. Trimming now (00:03.808 / 00:30.961, 393Mb) Core Package hl7.fhir.r4.core#4.0.1 (00:00.000 / 00:30.961, 393Mb) Running Terminology Log: /tmp/ohfu-fhir-ig-9140857497824767332.html Connect to Terminology Server at http://tx.fhir.org (00:31.800 / 01:02.761, 621Mb) Installing hl7.fhir.pubpack#0.2.3 to the package cache  Fetching:  Installing hl7.fhir.pubpack#0.2.3  done. Load Package hl7.fhir.pubpack#0.2.3 Installing hl7.fhir.xver-extensions#0.1.0 to the package cache  Fetching:  Installing hl7.fhir.xver-extensions#0.1.0  done. Load Package hl7.fhir.xver-extensions#0.1.0 Load Package hl7.terminology.r4#7.0.0 Load Package hl7.fhir.uv.extensions.r4#5.2.0 Installing hl7.terminology.r4#6.0.2 to the package cache  Fetching:  Installing hl7.terminology.r4#6.0.2  done. Load Package hl7.terminology.r4#6.0.2 Installing hl7.fhir.uv.extensions.r4#5.1.0 to the package cache  Fetching:  Installing hl7.fhir.uv.extensions.r4#5.1.0  done. Load Package hl7.fhir.uv.extensions.r4#5.1.0 Load Package hl7.fhir.be.core#2.1.2 Installing hl7.fhir.be.core#2.0.0 to the package cache  Fetching:  Installing hl7.fhir.be.core#2.0.0  done. Load Package hl7.fhir.be.core#2.0.0 Installing hl7.terminology#3.1.0 to the package cache  Fetching:  Installing hl7.terminology#3.1.0  done. Load Package hl7.terminology#3.1.0 Load Package hl7.fhir.be.medication#1.0.0 Installing hl7.terminology.r4#3.1.0 to the package cache  Fetching:  Installing hl7.terminology.r4#3.1.0  done. Load Package hl7.terminology.r4#3.1.0 Load Package hl7.fhir.be.core-clinical#1.0.0 Load Package hl7.fhir.uv.tools.r4#0.8.0 Load R5 Specials Installing hl7.fhir.r5.core#5.0.0 to the package cache  Fetching:  Installing hl7.fhir.r5.core#5.0.0  done. Initialization complete (01:12.435 / 02:15.197, 2Gb) Load IG (00:00.000 / 02:15.198, 2Gb) Load Content (00:00.003 / 02:15.201, 2Gb) Using en-US as the default narrative language. (no language information in Implementation Guide) (00:00.102 / 02:15.303, 2Gb) Process Loaded Resources (00:01.071 / 02:16.375, 2Gb) Generating Snapshots (00:00.223 / 02:16.599, 3Gb) Signing Certificate: RSA key for Subject: OU=IG Publisher, L=Ann Arbor, CN=hl7.org, O=HL7, ST=Missouri, C=us from: OU=IG Publisher, L=Ann Arbor, CN=hl7.org, O=HL7, ST=Missouri, C=us Fetch https://www.ehealth.fgov.be/standards/fhir/vaccination/package-list.json for version check (00:00.492 / 02:17.091, 3Gb) Checking Language (00:00.990 / 02:18.082, 3Gb) Load Dependency Info (00:00.002 / 02:18.085, 3Gb) Load Info (00:00.001 / 02:18.086, 3Gb) Load Paths (00:00.000 / 02:18.086, 3Gb) Check R4 / R4B (00:00.000 / 02:18.087, 3Gb) Assign Comparison Ids (00:00.118 / 02:18.206, 486Mb) Propagating status (00:00.000 / 02:18.206, 486Mb) Generating Narratives (00:00.000 / 02:18.206, 486Mb) Validating Conformance Resources (00:14.057 / 02:32.264, 655Mb) Check profiles & code systems (00:10.701 / 02:42.965, 987Mb) Check realm rules (00:00.001 / 02:42.967, 987Mb) Previous Version Comparison (00:00.000 / 02:42.967, 987Mb) Checking for Bundles to sign (00:00.018 / 02:42.986, 987Mb) Validating Resources (00:00.000 / 02:42.986, 987Mb) Processing Provenance Records (00:07.713 / 02:50.700, 1Gb) Generating Outputs in /scratch/repo/output (00:00.000 / 02:50.700, 1Gb) Generate Native Outputs (00:00.279 / 02:50.980, 1Gb) Run Template (00:02.831 / 02:53.811, 1Gb) Generate HTML Outputs (00:01.173 / 02:54.984, 1Gb) Generate Spreadsheets (00:08.563 / 03:03.548, 1Gb) Generate Summaries (00:01.725 / 03:05.274, 2Gb) Generating Summary Outputs (00:00.000 / 03:05.274, 2Gb) DB Cumulative Time invested: 00:00:01.769 Sending Usage Stats to Server (00:11.425 / 03:16.699, 1Gb) ## Memory (MB): Use = 1573, Free = 17434, Total = 19008, Max = 19008 (00:00.008 / 03:16.707, 1Gb) Reclaiming memory... (00:00.000 / 03:16.707, 1Gb) ## Memory (MB): Use = 842, Free = 18165, Total = 19008, Max = 19008 (00:00.648 / 03:17.356, 858Mb) Run jekyll: jekyll build --destination "/scratch/repo/output" (in folder /scratch/repo/temp/pages) (00:00.002 / 03:17.358, 858Mb) Troubleshooting Note: usual cases for Jekyll to fail are: (00:00.000 / 03:17.358, 858Mb) * A failure to produce a fragment that is already logged in the output above (00:00.000 / 03:17.358, 858Mb) * A reference to a manually edited file that hasn't been provided (00:00.000 / 03:17.358, 858Mb) Jekyll: Source: /scratch/repo/temp/pages (00:00.417 / 03:17.775, 874Mb) Jekyll: Generating... (00:00.000 / 03:17.776, 874Mb) Jekyll: done in 1.463 seconds. (00:01.462 / 03:19.238, 874Mb) Checking Output HTML (00:01.393 / 03:20.632, 1Gb) Processed /scratch/repo/output - % reduction = 99 (18934942 ==> 375003) found 1330 files (00:00.703 / 03:21.336, 1Gb) ........................................ ........................................ ... 1330 html files, 0 pages invalid xhtml (0%) (00:07.610 / 03:28.946, 7Gb) ... 75505 links, 0 broken links (0%) (00:00.000 / 03:28.946, 7Gb) Generate fragment-usage-analysis.csv (00:00.000 / 03:28.946, 7Gb) Build final .zip (00:00.005 / 03:28.952, 7Gb) Final .zip built (00:00.890 / 03:29.842, 7Gb) Built. Times: loading: 00:02.881, generate: 01:16.264, narrative generation: 00:14.057, realm-rules: 00:00.000, previous-version: 00:00.000, jekyll: 00:01.909, validation: 00:18.397 (#73), template: 00:01.083 (#3) (00:04.505 / 03:34.348, 7Gb) Generating QA (00:00.000 / 03:34.348, 7Gb) Internal error in location for message: 'Error @1, 2: Found / expecting a token name', loc = '/scratch/repo/output/StructureDefinition-be-model-vaccination-mappings.html', err = 'The html source has duplicate anchor Ids: be-model-vaccination,be-model-vaccination.administeredProd' Internal error in location for message: 'Error @1, 2: Found / expecting a token name', loc = '/scratch/repo/output/StructureDefinition-be-vaccination-mappings.html', err = 'The html source has duplicate anchor Ids: Immunization,Immunization.contained,Immunization.doseQuant' Validation output in /scratch/repo/output/qa.html Errors: 9, Warnings: 209, Info: 9, Broken Links: 0 (00:00.427 / 03:34.775, 7Gb) Finished @ 12/2/25, 8:53 AM. Max Memory Used = 7Gb (00:00.028 / 03:34.804, 7Gb)