CanShare models
0.1.0 - ci-build

CanShare models, published by David hay. This guide is not an authorized publication; it is the continuous build for version 0.1.0 built by the FHIR (HL7® FHIR® Standard) CI Build. This version is based on the current content of https://github.com/davidhay25/models/ and changes regularly. See the Directory of published versions

Logical Model: Specimen (soft tissue biopsy histopathology)

Official URL: http://example.org/StructureDefinition/SoftTissueBiopsyHistoSpecimen-cs Version: 0.1.0
Draft as of 2024-03-04 Computable Name: SoftTissueBiopsyHistoSpecimen_cs

Relevant details about the biopsy specimen in a soft tissue histopathology composition.

Usage:

  • This Logical Model Profile is not used by any profiles in this Implementation Guide

Formal Views of Profile Content

Description of Profiles, Differentials, Snapshots and how the different presentations work.

This structure is derived from Base

NameFlagsCard.TypeDescription & Constraintsdoco
.. SoftTissueBiopsyHistoSpecimen-cs 0..*BaseSpecimen (soft tissue biopsy histopathology)
Instances of this logical model are not marked to be the target of a Reference
... Specimen 0..1BackboneElementA sample to be used for analysis.
.... Id 0..*IdentifierAn identifier for the specimen, e.g. a barcode.
.... TumourIdentifier 0..*stringThe number or identifier used to reference the given lesion/tumour.
.... Category 0..1CodeableConceptThe category of specimen, e.g. biopsy specimen
.... Type 0..1CodeableConceptThe type of specimen, e.g. core biopsy specimen, lymph node excision specimen.
.... Qualifier 0..1CodeableConceptA qualifying characteristic of the specimen, e.g. sessile, pedunculated, calcified, non-calcified.
.... Collection 0..1BackboneElementDetails about the collection of the specimen.
..... CollectionDate 0..1dateTimeThe date and/or time that the sample/specimen was collected.
..... BodySite 0..1BackboneElementThe site from which the sample/specimen was collected.
...... BodyStructure 1..1CodeableConceptThe anatomical structure being described
Binding: https://nzhts.digital.health.nz/fhir/ValueSet/canshare-topography (preferred)
...... Comments 0..1CodeableConceptFree text comments describing the body site.
...... newElement 0..1stringSoftTissueBiopsyHistoSpecimen.Specimen.Collection.BodySite.newElement
..... Technique 0..*CodeableConceptThe technique used to collect the specimen, e.g. Random specimen collection.
.... ContainerQuantity 0..1QuantityA count of the number of containers (e.g. 3 tubes, 4 slides, 1 bottle) in which the specimen is placed after collection.
.... Comments 0..1stringFree text comments about the specimen.
... SpecimenContainer 0..*BackboneElementAn individual container (e.g. a specific tube) in which the specimen is placed.
.... ContainerId 0..1IdentifierAn identifier for the individual specimen container.
.... SpecimenId 0..1IdentifierAn identifier for the specimen in the container.
.... SpecimenQualifier 0..1CodeableConceptA qualifying characteristic of the specimen, e.g. sessile, pedunculated, calcified, non-calcified.
.... PreparationTechnique 0..*CodeableConceptSoftTissueBiopsyHistoSpecimen.SpecimenContainer.PreparationTechnique
.... MediumStatus 0..1CodeableConceptWhether or not the specimen is fresh or in a medium.
.... MediumType 0..1CodeableConceptThe type of medium used for the specimen in the container.
.... Quantity 0..1QuantityThe quantity of specimen (volume, weight or count of pieces/fragments) placed in this individual container.
... ClinicalImpression 0..1BackboneElementThe suspected behaviour of the specimen, e.g. benign, in situ, malignant.
.... Status 1..1CodeableConceptThe status of the observation
.... Code 1..1CodeableConceptThe type of observation made.
Binding: https://nzhts.digital.health.nz/fhir/ValueSet/canshare-observation (preferred)
.... SpecimenId 0..1IdentifierAn identifier of the specimen being observed.
.... Value 1..1CodeableConceptThe suspected behaviour of the specimen, e.g. benign, in situ, malignant.
.... Status 1..1CodeableConceptThe status of the observation
.... Code 1..1CodeableConceptThe type of observation made.
Binding: https://nzhts.digital.health.nz/fhir/ValueSet/canshare-observation (preferred)
.... SpecimenId 0..1IdentifierAn identifier of the specimen being observed.
.... SpecimenSentForObservation 0..1booleanWhether or not the specimen has been sent for ancillary study.

doco Documentation for this format

Terminology Bindings (Differential)

PathConformanceValueSetURI
SoftTissueBiopsyHistoSpecimen-cs.Specimen.Collection.BodySite.BodyStructurepreferredhttps://nzhts.digital.health.nz/fhir/ValueSet/canshare-topography
https://nzhts.digital.health.nz/fhir/ValueSet/canshare-topography
SoftTissueBiopsyHistoSpecimen-cs.ClinicalImpression.Codepreferredhttps://nzhts.digital.health.nz/fhir/ValueSet/canshare-observation
https://nzhts.digital.health.nz/fhir/ValueSet/canshare-observation
SoftTissueBiopsyHistoSpecimen-cs.AncillaryStudies.Codepreferredhttps://nzhts.digital.health.nz/fhir/ValueSet/canshare-observation
https://nzhts.digital.health.nz/fhir/ValueSet/canshare-observation
NameFlagsCard.TypeDescription & Constraintsdoco
.. SoftTissueBiopsyHistoSpecimen-cs 0..*BaseSpecimen (soft tissue biopsy histopathology)
Instances of this logical model are not marked to be the target of a Reference
... Specimen 0..1BackboneElementA sample to be used for analysis.
.... modifierExtension ?!Σ0..*ExtensionExtensions that cannot be ignored even if unrecognized
.... Id 0..*IdentifierAn identifier for the specimen, e.g. a barcode.
.... TumourIdentifier 0..*stringThe number or identifier used to reference the given lesion/tumour.
.... Category 0..1CodeableConceptThe category of specimen, e.g. biopsy specimen
.... Type 0..1CodeableConceptThe type of specimen, e.g. core biopsy specimen, lymph node excision specimen.
.... Qualifier 0..1CodeableConceptA qualifying characteristic of the specimen, e.g. sessile, pedunculated, calcified, non-calcified.
.... Collection 0..1BackboneElementDetails about the collection of the specimen.
..... modifierExtension ?!Σ0..*ExtensionExtensions that cannot be ignored even if unrecognized
..... CollectionDate 0..1dateTimeThe date and/or time that the sample/specimen was collected.
..... BodySite 0..1BackboneElementThe site from which the sample/specimen was collected.
...... modifierExtension ?!Σ0..*ExtensionExtensions that cannot be ignored even if unrecognized
...... BodyStructure 1..1CodeableConceptThe anatomical structure being described
Binding: https://nzhts.digital.health.nz/fhir/ValueSet/canshare-topography (preferred)
...... Comments 0..1CodeableConceptFree text comments describing the body site.
...... newElement 0..1stringSoftTissueBiopsyHistoSpecimen.Specimen.Collection.BodySite.newElement
..... Technique 0..*CodeableConceptThe technique used to collect the specimen, e.g. Random specimen collection.
.... ContainerQuantity 0..1QuantityA count of the number of containers (e.g. 3 tubes, 4 slides, 1 bottle) in which the specimen is placed after collection.
.... Comments 0..1stringFree text comments about the specimen.
... SpecimenContainer 0..*BackboneElementAn individual container (e.g. a specific tube) in which the specimen is placed.
.... modifierExtension ?!Σ0..*ExtensionExtensions that cannot be ignored even if unrecognized
.... ContainerId 0..1IdentifierAn identifier for the individual specimen container.
.... SpecimenId 0..1IdentifierAn identifier for the specimen in the container.
.... SpecimenQualifier 0..1CodeableConceptA qualifying characteristic of the specimen, e.g. sessile, pedunculated, calcified, non-calcified.
.... PreparationTechnique 0..*CodeableConceptSoftTissueBiopsyHistoSpecimen.SpecimenContainer.PreparationTechnique
.... MediumStatus 0..1CodeableConceptWhether or not the specimen is fresh or in a medium.
.... MediumType 0..1CodeableConceptThe type of medium used for the specimen in the container.
.... Quantity 0..1QuantityThe quantity of specimen (volume, weight or count of pieces/fragments) placed in this individual container.
... ClinicalImpression 0..1BackboneElementThe suspected behaviour of the specimen, e.g. benign, in situ, malignant.
.... modifierExtension ?!Σ0..*ExtensionExtensions that cannot be ignored even if unrecognized
.... Status 1..1CodeableConceptThe status of the observation
.... Code 1..1CodeableConceptThe type of observation made.
Binding: https://nzhts.digital.health.nz/fhir/ValueSet/canshare-observation (preferred)
.... SpecimenId 0..1IdentifierAn identifier of the specimen being observed.
.... Value 1..1CodeableConceptThe suspected behaviour of the specimen, e.g. benign, in situ, malignant.
.... modifierExtension ?!Σ0..*ExtensionExtensions that cannot be ignored even if unrecognized
.... Status 1..1CodeableConceptThe status of the observation
.... Code 1..1CodeableConceptThe type of observation made.
Binding: https://nzhts.digital.health.nz/fhir/ValueSet/canshare-observation (preferred)
.... SpecimenId 0..1IdentifierAn identifier of the specimen being observed.
.... SpecimenSentForObservation 0..1booleanWhether or not the specimen has been sent for ancillary study.

doco Documentation for this format

Terminology Bindings

PathConformanceValueSetURI
SoftTissueBiopsyHistoSpecimen-cs.Specimen.Collection.BodySite.BodyStructurepreferredhttps://nzhts.digital.health.nz/fhir/ValueSet/canshare-topography
https://nzhts.digital.health.nz/fhir/ValueSet/canshare-topography
SoftTissueBiopsyHistoSpecimen-cs.ClinicalImpression.Codepreferredhttps://nzhts.digital.health.nz/fhir/ValueSet/canshare-observation
https://nzhts.digital.health.nz/fhir/ValueSet/canshare-observation
SoftTissueBiopsyHistoSpecimen-cs.AncillaryStudies.Codepreferredhttps://nzhts.digital.health.nz/fhir/ValueSet/canshare-observation
https://nzhts.digital.health.nz/fhir/ValueSet/canshare-observation

Constraints

IdGradePath(s)DetailsRequirements
ele-1error**ALL** elementsAll FHIR elements must have a @value or children
: hasValue() or (children().count() > id.count())
ext-1error**ALL** extensionsMust have either extensions or value[x], not both
: extension.exists() != value.exists()
NameFlagsCard.TypeDescription & Constraintsdoco
.. SoftTissueBiopsyHistoSpecimen-cs 0..*BaseSpecimen (soft tissue biopsy histopathology)
Instances of this logical model are not marked to be the target of a Reference
... Specimen 0..1BackboneElementA sample to be used for analysis.
.... @id 0..1stringUnique id for inter-element referencing
.... extension 0..*ExtensionAdditional content defined by implementations
Slice: Unordered, Open by value:url
.... modifierExtension ?!Σ0..*ExtensionExtensions that cannot be ignored even if unrecognized
.... Id 0..*IdentifierAn identifier for the specimen, e.g. a barcode.
.... TumourIdentifier 0..*stringThe number or identifier used to reference the given lesion/tumour.
.... Category 0..1CodeableConceptThe category of specimen, e.g. biopsy specimen
.... Type 0..1CodeableConceptThe type of specimen, e.g. core biopsy specimen, lymph node excision specimen.
.... Qualifier 0..1CodeableConceptA qualifying characteristic of the specimen, e.g. sessile, pedunculated, calcified, non-calcified.
.... Collection 0..1BackboneElementDetails about the collection of the specimen.
..... @id 0..1stringUnique id for inter-element referencing
..... extension 0..*ExtensionAdditional content defined by implementations
Slice: Unordered, Open by value:url
..... modifierExtension ?!Σ0..*ExtensionExtensions that cannot be ignored even if unrecognized
..... CollectionDate 0..1dateTimeThe date and/or time that the sample/specimen was collected.
..... BodySite 0..1BackboneElementThe site from which the sample/specimen was collected.
...... @id 0..1stringUnique id for inter-element referencing
...... extension 0..*ExtensionAdditional content defined by implementations
Slice: Unordered, Open by value:url
...... modifierExtension ?!Σ0..*ExtensionExtensions that cannot be ignored even if unrecognized
...... BodyStructure 1..1CodeableConceptThe anatomical structure being described
Binding: https://nzhts.digital.health.nz/fhir/ValueSet/canshare-topography (preferred)
...... Comments 0..1CodeableConceptFree text comments describing the body site.
...... newElement 0..1stringSoftTissueBiopsyHistoSpecimen.Specimen.Collection.BodySite.newElement
..... Technique 0..*CodeableConceptThe technique used to collect the specimen, e.g. Random specimen collection.
.... ContainerQuantity 0..1QuantityA count of the number of containers (e.g. 3 tubes, 4 slides, 1 bottle) in which the specimen is placed after collection.
.... Comments 0..1stringFree text comments about the specimen.
... SpecimenContainer 0..*BackboneElementAn individual container (e.g. a specific tube) in which the specimen is placed.
.... @id 0..1stringUnique id for inter-element referencing
.... extension 0..*ExtensionAdditional content defined by implementations
Slice: Unordered, Open by value:url
.... modifierExtension ?!Σ0..*ExtensionExtensions that cannot be ignored even if unrecognized
.... ContainerId 0..1IdentifierAn identifier for the individual specimen container.
.... SpecimenId 0..1IdentifierAn identifier for the specimen in the container.
.... SpecimenQualifier 0..1CodeableConceptA qualifying characteristic of the specimen, e.g. sessile, pedunculated, calcified, non-calcified.
.... PreparationTechnique 0..*CodeableConceptSoftTissueBiopsyHistoSpecimen.SpecimenContainer.PreparationTechnique
.... MediumStatus 0..1CodeableConceptWhether or not the specimen is fresh or in a medium.
.... MediumType 0..1CodeableConceptThe type of medium used for the specimen in the container.
.... Quantity 0..1QuantityThe quantity of specimen (volume, weight or count of pieces/fragments) placed in this individual container.
... ClinicalImpression 0..1BackboneElementThe suspected behaviour of the specimen, e.g. benign, in situ, malignant.
.... @id 0..1stringUnique id for inter-element referencing
.... extension 0..*ExtensionAdditional content defined by implementations
Slice: Unordered, Open by value:url
.... modifierExtension ?!Σ0..*ExtensionExtensions that cannot be ignored even if unrecognized
.... Status 1..1CodeableConceptThe status of the observation
.... Code 1..1CodeableConceptThe type of observation made.
Binding: https://nzhts.digital.health.nz/fhir/ValueSet/canshare-observation (preferred)
.... SpecimenId 0..1IdentifierAn identifier of the specimen being observed.
.... Value 1..1CodeableConceptThe suspected behaviour of the specimen, e.g. benign, in situ, malignant.
.... @id 0..1stringUnique id for inter-element referencing
.... extension 0..*ExtensionAdditional content defined by implementations
Slice: Unordered, Open by value:url
.... modifierExtension ?!Σ0..*ExtensionExtensions that cannot be ignored even if unrecognized
.... Status 1..1CodeableConceptThe status of the observation
.... Code 1..1CodeableConceptThe type of observation made.
Binding: https://nzhts.digital.health.nz/fhir/ValueSet/canshare-observation (preferred)
.... SpecimenId 0..1IdentifierAn identifier of the specimen being observed.
.... SpecimenSentForObservation 0..1booleanWhether or not the specimen has been sent for ancillary study.

doco Documentation for this format

Terminology Bindings

PathConformanceValueSetURI
SoftTissueBiopsyHistoSpecimen-cs.Specimen.Collection.BodySite.BodyStructurepreferredhttps://nzhts.digital.health.nz/fhir/ValueSet/canshare-topography
https://nzhts.digital.health.nz/fhir/ValueSet/canshare-topography
SoftTissueBiopsyHistoSpecimen-cs.ClinicalImpression.Codepreferredhttps://nzhts.digital.health.nz/fhir/ValueSet/canshare-observation
https://nzhts.digital.health.nz/fhir/ValueSet/canshare-observation
SoftTissueBiopsyHistoSpecimen-cs.AncillaryStudies.Codepreferredhttps://nzhts.digital.health.nz/fhir/ValueSet/canshare-observation
https://nzhts.digital.health.nz/fhir/ValueSet/canshare-observation

Constraints

IdGradePath(s)DetailsRequirements
ele-1error**ALL** elementsAll FHIR elements must have a @value or children
: hasValue() or (children().count() > id.count())
ext-1error**ALL** extensionsMust have either extensions or value[x], not both
: extension.exists() != value.exists()

This structure is derived from Base

Summary

Mandatory: 0 element (6 nested mandatory elements)

Differential View

This structure is derived from Base

NameFlagsCard.TypeDescription & Constraintsdoco
.. SoftTissueBiopsyHistoSpecimen-cs 0..*BaseSpecimen (soft tissue biopsy histopathology)
Instances of this logical model are not marked to be the target of a Reference
... Specimen 0..1BackboneElementA sample to be used for analysis.
.... Id 0..*IdentifierAn identifier for the specimen, e.g. a barcode.
.... TumourIdentifier 0..*stringThe number or identifier used to reference the given lesion/tumour.
.... Category 0..1CodeableConceptThe category of specimen, e.g. biopsy specimen
.... Type 0..1CodeableConceptThe type of specimen, e.g. core biopsy specimen, lymph node excision specimen.
.... Qualifier 0..1CodeableConceptA qualifying characteristic of the specimen, e.g. sessile, pedunculated, calcified, non-calcified.
.... Collection 0..1BackboneElementDetails about the collection of the specimen.
..... CollectionDate 0..1dateTimeThe date and/or time that the sample/specimen was collected.
..... BodySite 0..1BackboneElementThe site from which the sample/specimen was collected.
...... BodyStructure 1..1CodeableConceptThe anatomical structure being described
Binding: https://nzhts.digital.health.nz/fhir/ValueSet/canshare-topography (preferred)
...... Comments 0..1CodeableConceptFree text comments describing the body site.
...... newElement 0..1stringSoftTissueBiopsyHistoSpecimen.Specimen.Collection.BodySite.newElement
..... Technique 0..*CodeableConceptThe technique used to collect the specimen, e.g. Random specimen collection.
.... ContainerQuantity 0..1QuantityA count of the number of containers (e.g. 3 tubes, 4 slides, 1 bottle) in which the specimen is placed after collection.
.... Comments 0..1stringFree text comments about the specimen.
... SpecimenContainer 0..*BackboneElementAn individual container (e.g. a specific tube) in which the specimen is placed.
.... ContainerId 0..1IdentifierAn identifier for the individual specimen container.
.... SpecimenId 0..1IdentifierAn identifier for the specimen in the container.
.... SpecimenQualifier 0..1CodeableConceptA qualifying characteristic of the specimen, e.g. sessile, pedunculated, calcified, non-calcified.
.... PreparationTechnique 0..*CodeableConceptSoftTissueBiopsyHistoSpecimen.SpecimenContainer.PreparationTechnique
.... MediumStatus 0..1CodeableConceptWhether or not the specimen is fresh or in a medium.
.... MediumType 0..1CodeableConceptThe type of medium used for the specimen in the container.
.... Quantity 0..1QuantityThe quantity of specimen (volume, weight or count of pieces/fragments) placed in this individual container.
... ClinicalImpression 0..1BackboneElementThe suspected behaviour of the specimen, e.g. benign, in situ, malignant.
.... Status 1..1CodeableConceptThe status of the observation
.... Code 1..1CodeableConceptThe type of observation made.
Binding: https://nzhts.digital.health.nz/fhir/ValueSet/canshare-observation (preferred)
.... SpecimenId 0..1IdentifierAn identifier of the specimen being observed.
.... Value 1..1CodeableConceptThe suspected behaviour of the specimen, e.g. benign, in situ, malignant.
.... Status 1..1CodeableConceptThe status of the observation
.... Code 1..1CodeableConceptThe type of observation made.
Binding: https://nzhts.digital.health.nz/fhir/ValueSet/canshare-observation (preferred)
.... SpecimenId 0..1IdentifierAn identifier of the specimen being observed.
.... SpecimenSentForObservation 0..1booleanWhether or not the specimen has been sent for ancillary study.

doco Documentation for this format

Terminology Bindings (Differential)

PathConformanceValueSetURI
SoftTissueBiopsyHistoSpecimen-cs.Specimen.Collection.BodySite.BodyStructurepreferredhttps://nzhts.digital.health.nz/fhir/ValueSet/canshare-topography
https://nzhts.digital.health.nz/fhir/ValueSet/canshare-topography
SoftTissueBiopsyHistoSpecimen-cs.ClinicalImpression.Codepreferredhttps://nzhts.digital.health.nz/fhir/ValueSet/canshare-observation
https://nzhts.digital.health.nz/fhir/ValueSet/canshare-observation
SoftTissueBiopsyHistoSpecimen-cs.AncillaryStudies.Codepreferredhttps://nzhts.digital.health.nz/fhir/ValueSet/canshare-observation
https://nzhts.digital.health.nz/fhir/ValueSet/canshare-observation

Key Elements View

NameFlagsCard.TypeDescription & Constraintsdoco
.. SoftTissueBiopsyHistoSpecimen-cs 0..*BaseSpecimen (soft tissue biopsy histopathology)
Instances of this logical model are not marked to be the target of a Reference
... Specimen 0..1BackboneElementA sample to be used for analysis.
.... modifierExtension ?!Σ0..*ExtensionExtensions that cannot be ignored even if unrecognized
.... Id 0..*IdentifierAn identifier for the specimen, e.g. a barcode.
.... TumourIdentifier 0..*stringThe number or identifier used to reference the given lesion/tumour.
.... Category 0..1CodeableConceptThe category of specimen, e.g. biopsy specimen
.... Type 0..1CodeableConceptThe type of specimen, e.g. core biopsy specimen, lymph node excision specimen.
.... Qualifier 0..1CodeableConceptA qualifying characteristic of the specimen, e.g. sessile, pedunculated, calcified, non-calcified.
.... Collection 0..1BackboneElementDetails about the collection of the specimen.
..... modifierExtension ?!Σ0..*ExtensionExtensions that cannot be ignored even if unrecognized
..... CollectionDate 0..1dateTimeThe date and/or time that the sample/specimen was collected.
..... BodySite 0..1BackboneElementThe site from which the sample/specimen was collected.
...... modifierExtension ?!Σ0..*ExtensionExtensions that cannot be ignored even if unrecognized
...... BodyStructure 1..1CodeableConceptThe anatomical structure being described
Binding: https://nzhts.digital.health.nz/fhir/ValueSet/canshare-topography (preferred)
...... Comments 0..1CodeableConceptFree text comments describing the body site.
...... newElement 0..1stringSoftTissueBiopsyHistoSpecimen.Specimen.Collection.BodySite.newElement
..... Technique 0..*CodeableConceptThe technique used to collect the specimen, e.g. Random specimen collection.
.... ContainerQuantity 0..1QuantityA count of the number of containers (e.g. 3 tubes, 4 slides, 1 bottle) in which the specimen is placed after collection.
.... Comments 0..1stringFree text comments about the specimen.
... SpecimenContainer 0..*BackboneElementAn individual container (e.g. a specific tube) in which the specimen is placed.
.... modifierExtension ?!Σ0..*ExtensionExtensions that cannot be ignored even if unrecognized
.... ContainerId 0..1IdentifierAn identifier for the individual specimen container.
.... SpecimenId 0..1IdentifierAn identifier for the specimen in the container.
.... SpecimenQualifier 0..1CodeableConceptA qualifying characteristic of the specimen, e.g. sessile, pedunculated, calcified, non-calcified.
.... PreparationTechnique 0..*CodeableConceptSoftTissueBiopsyHistoSpecimen.SpecimenContainer.PreparationTechnique
.... MediumStatus 0..1CodeableConceptWhether or not the specimen is fresh or in a medium.
.... MediumType 0..1CodeableConceptThe type of medium used for the specimen in the container.
.... Quantity 0..1QuantityThe quantity of specimen (volume, weight or count of pieces/fragments) placed in this individual container.
... ClinicalImpression 0..1BackboneElementThe suspected behaviour of the specimen, e.g. benign, in situ, malignant.
.... modifierExtension ?!Σ0..*ExtensionExtensions that cannot be ignored even if unrecognized
.... Status 1..1CodeableConceptThe status of the observation
.... Code 1..1CodeableConceptThe type of observation made.
Binding: https://nzhts.digital.health.nz/fhir/ValueSet/canshare-observation (preferred)
.... SpecimenId 0..1IdentifierAn identifier of the specimen being observed.
.... Value 1..1CodeableConceptThe suspected behaviour of the specimen, e.g. benign, in situ, malignant.
.... modifierExtension ?!Σ0..*ExtensionExtensions that cannot be ignored even if unrecognized
.... Status 1..1CodeableConceptThe status of the observation
.... Code 1..1CodeableConceptThe type of observation made.
Binding: https://nzhts.digital.health.nz/fhir/ValueSet/canshare-observation (preferred)
.... SpecimenId 0..1IdentifierAn identifier of the specimen being observed.
.... SpecimenSentForObservation 0..1booleanWhether or not the specimen has been sent for ancillary study.

doco Documentation for this format

Terminology Bindings

PathConformanceValueSetURI
SoftTissueBiopsyHistoSpecimen-cs.Specimen.Collection.BodySite.BodyStructurepreferredhttps://nzhts.digital.health.nz/fhir/ValueSet/canshare-topography
https://nzhts.digital.health.nz/fhir/ValueSet/canshare-topography
SoftTissueBiopsyHistoSpecimen-cs.ClinicalImpression.Codepreferredhttps://nzhts.digital.health.nz/fhir/ValueSet/canshare-observation
https://nzhts.digital.health.nz/fhir/ValueSet/canshare-observation
SoftTissueBiopsyHistoSpecimen-cs.AncillaryStudies.Codepreferredhttps://nzhts.digital.health.nz/fhir/ValueSet/canshare-observation
https://nzhts.digital.health.nz/fhir/ValueSet/canshare-observation

Constraints

IdGradePath(s)DetailsRequirements
ele-1error**ALL** elementsAll FHIR elements must have a @value or children
: hasValue() or (children().count() > id.count())
ext-1error**ALL** extensionsMust have either extensions or value[x], not both
: extension.exists() != value.exists()

Snapshot View

NameFlagsCard.TypeDescription & Constraintsdoco
.. SoftTissueBiopsyHistoSpecimen-cs 0..*BaseSpecimen (soft tissue biopsy histopathology)
Instances of this logical model are not marked to be the target of a Reference
... Specimen 0..1BackboneElementA sample to be used for analysis.
.... @id 0..1stringUnique id for inter-element referencing
.... extension 0..*ExtensionAdditional content defined by implementations
Slice: Unordered, Open by value:url
.... modifierExtension ?!Σ0..*ExtensionExtensions that cannot be ignored even if unrecognized
.... Id 0..*IdentifierAn identifier for the specimen, e.g. a barcode.
.... TumourIdentifier 0..*stringThe number or identifier used to reference the given lesion/tumour.
.... Category 0..1CodeableConceptThe category of specimen, e.g. biopsy specimen
.... Type 0..1CodeableConceptThe type of specimen, e.g. core biopsy specimen, lymph node excision specimen.
.... Qualifier 0..1CodeableConceptA qualifying characteristic of the specimen, e.g. sessile, pedunculated, calcified, non-calcified.
.... Collection 0..1BackboneElementDetails about the collection of the specimen.
..... @id 0..1stringUnique id for inter-element referencing
..... extension 0..*ExtensionAdditional content defined by implementations
Slice: Unordered, Open by value:url
..... modifierExtension ?!Σ0..*ExtensionExtensions that cannot be ignored even if unrecognized
..... CollectionDate 0..1dateTimeThe date and/or time that the sample/specimen was collected.
..... BodySite 0..1BackboneElementThe site from which the sample/specimen was collected.
...... @id 0..1stringUnique id for inter-element referencing
...... extension 0..*ExtensionAdditional content defined by implementations
Slice: Unordered, Open by value:url
...... modifierExtension ?!Σ0..*ExtensionExtensions that cannot be ignored even if unrecognized
...... BodyStructure 1..1CodeableConceptThe anatomical structure being described
Binding: https://nzhts.digital.health.nz/fhir/ValueSet/canshare-topography (preferred)
...... Comments 0..1CodeableConceptFree text comments describing the body site.
...... newElement 0..1stringSoftTissueBiopsyHistoSpecimen.Specimen.Collection.BodySite.newElement
..... Technique 0..*CodeableConceptThe technique used to collect the specimen, e.g. Random specimen collection.
.... ContainerQuantity 0..1QuantityA count of the number of containers (e.g. 3 tubes, 4 slides, 1 bottle) in which the specimen is placed after collection.
.... Comments 0..1stringFree text comments about the specimen.
... SpecimenContainer 0..*BackboneElementAn individual container (e.g. a specific tube) in which the specimen is placed.
.... @id 0..1stringUnique id for inter-element referencing
.... extension 0..*ExtensionAdditional content defined by implementations
Slice: Unordered, Open by value:url
.... modifierExtension ?!Σ0..*ExtensionExtensions that cannot be ignored even if unrecognized
.... ContainerId 0..1IdentifierAn identifier for the individual specimen container.
.... SpecimenId 0..1IdentifierAn identifier for the specimen in the container.
.... SpecimenQualifier 0..1CodeableConceptA qualifying characteristic of the specimen, e.g. sessile, pedunculated, calcified, non-calcified.
.... PreparationTechnique 0..*CodeableConceptSoftTissueBiopsyHistoSpecimen.SpecimenContainer.PreparationTechnique
.... MediumStatus 0..1CodeableConceptWhether or not the specimen is fresh or in a medium.
.... MediumType 0..1CodeableConceptThe type of medium used for the specimen in the container.
.... Quantity 0..1QuantityThe quantity of specimen (volume, weight or count of pieces/fragments) placed in this individual container.
... ClinicalImpression 0..1BackboneElementThe suspected behaviour of the specimen, e.g. benign, in situ, malignant.
.... @id 0..1stringUnique id for inter-element referencing
.... extension 0..*ExtensionAdditional content defined by implementations
Slice: Unordered, Open by value:url
.... modifierExtension ?!Σ0..*ExtensionExtensions that cannot be ignored even if unrecognized
.... Status 1..1CodeableConceptThe status of the observation
.... Code 1..1CodeableConceptThe type of observation made.
Binding: https://nzhts.digital.health.nz/fhir/ValueSet/canshare-observation (preferred)
.... SpecimenId 0..1IdentifierAn identifier of the specimen being observed.
.... Value 1..1CodeableConceptThe suspected behaviour of the specimen, e.g. benign, in situ, malignant.
.... @id 0..1stringUnique id for inter-element referencing
.... extension 0..*ExtensionAdditional content defined by implementations
Slice: Unordered, Open by value:url
.... modifierExtension ?!Σ0..*ExtensionExtensions that cannot be ignored even if unrecognized
.... Status 1..1CodeableConceptThe status of the observation
.... Code 1..1CodeableConceptThe type of observation made.
Binding: https://nzhts.digital.health.nz/fhir/ValueSet/canshare-observation (preferred)
.... SpecimenId 0..1IdentifierAn identifier of the specimen being observed.
.... SpecimenSentForObservation 0..1booleanWhether or not the specimen has been sent for ancillary study.

doco Documentation for this format

Terminology Bindings

PathConformanceValueSetURI
SoftTissueBiopsyHistoSpecimen-cs.Specimen.Collection.BodySite.BodyStructurepreferredhttps://nzhts.digital.health.nz/fhir/ValueSet/canshare-topography
https://nzhts.digital.health.nz/fhir/ValueSet/canshare-topography
SoftTissueBiopsyHistoSpecimen-cs.ClinicalImpression.Codepreferredhttps://nzhts.digital.health.nz/fhir/ValueSet/canshare-observation
https://nzhts.digital.health.nz/fhir/ValueSet/canshare-observation
SoftTissueBiopsyHistoSpecimen-cs.AncillaryStudies.Codepreferredhttps://nzhts.digital.health.nz/fhir/ValueSet/canshare-observation
https://nzhts.digital.health.nz/fhir/ValueSet/canshare-observation

Constraints

IdGradePath(s)DetailsRequirements
ele-1error**ALL** elementsAll FHIR elements must have a @value or children
: hasValue() or (children().count() > id.count())
ext-1error**ALL** extensionsMust have either extensions or value[x], not both
: extension.exists() != value.exists()

This structure is derived from Base

Summary

Mandatory: 0 element (6 nested mandatory elements)

 

Other representations of profile: CSV, Excel