INFO:root:about to clone! DEBUG:root:running: git clone --recursive https://github.com/IHE/PaLM.RPC --branch master repo DEBUG:root:Time to deadline 35879.998335 seconds Cloning into 'repo'... DEBUG:root:running: wget -q https://github.com/HL7/fhir-ig-publisher/releases/latest/download/publisher.jar -O publisher.jar DEBUG:root:Time to deadline 35879.582653 seconds DEBUG:root:running: npm -g install fsh-sushi DEBUG:root:Time to deadline 35877.764562 seconds added 116 packages in 4s 8 packages are looking for funding run `npm fund` for details npm notice npm notice New minor version of npm available! 9.5.1 -> 9.6.7 npm notice Changelog: npm notice Run `npm install -g npm@9.6.7` to update! npm notice DEBUG:root:running: java -Xms19000m -Xmx19000m -jar ../publisher.jar -ig ig.json -api-key-file /etc/ig.builder.keyfile.ini -fhir-settings /etc/fhir-settings.json -auto-ig-build -tx http://tx.fhir.org -target https://build.fhir.org/ig/IHE/PaLM.RPC/ -out /scratch/ig-build-temp-60UPDI/repo DEBUG:root:Time to deadline 35873.736999 seconds FHIR IG Publisher Version 1.3.13 (Git# 822ca088faed). Built 2023-05-29T19:40:43.999Z (8 days old) Detected Java version: 21-ea from /usr/local/openjdk-21 on Linux/amd64 (64bit). 19008MB available dir = /scratch/ig-build-temp-60UPDI/repo, path = /usr/local/openjdk-21/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin Parameters: -ig ig.json -api-key-file /etc/ig.builder.keyfile.ini -fhir-settings /etc/fhir-settings.json -auto-ig-build -tx http://tx.fhir.org -target https://build.fhir.org/ig/IHE/PaLM.RPC/ -out /scratch/ig-build-temp-60UPDI/repo Start Clock @ Tuesday, June 6, 2023, 8:12:52 PM Coordinated Universal Time (2023-06-06T20:12:52Z) Build FHIR IG from /scratch/ig-build-temp-60UPDI/repo (00:00.017) API keys loaded from /etc/fhir-settings.json (00:00.017) Package Cache: var/lib/.fhir/packages (00:00.020) Run Sushi on /scratch/ig-build-temp-60UPDI/repo (00:00.023) Sushi: info Running SUSHI v3.0.0 (implements FHIR Shorthand specification v2.0.0) (00:00.572) Sushi: info Arguments: (00:00.572) Sushi: info --require-latest (00:00.572) Sushi: info --out /scratch/ig-build-temp-60UPDI/repo (00:00.573) Sushi: info /scratch/ig-build-temp-60UPDI/repo (00:00.573) Sushi: info Using configuration file: /scratch/ig-build-temp-60UPDI/repo/sushi-config.yaml (00:01.369) Sushi: warn Configuration property resources has a value with an unexpected type. (00:01.498) Sushi: info Importing FSH text... (00:01.498) Sushi: info Preprocessed 24 documents with 5 aliases. (00:01.576) Sushi: info Imported 1 definitions and 22 instances. (00:01.587) Sushi: info Checking /root/.fhir/packages for hl7.fhir.uv.tools#current... (00:01.589) Sushi: info Did not find hl7.fhir.uv.tools#current in /root/.fhir/packages. (00:01.591) Sushi: info Downloading hl7.fhir.uv.tools#current... https://build.fhir.org/ig/FHIR/fhir-tools-ig/branches/master/package.tgz (00:01.659) Sushi: info Downloaded hl7.fhir.uv.tools#current (00:01.667) Sushi: info Loaded package hl7.fhir.uv.tools#current (00:01.725) Sushi: info Checking /root/.fhir/packages for hl7.terminology.r4#5.0.0... (00:02.275) Sushi: info Did not find hl7.terminology.r4#5.0.0 in /root/.fhir/packages. (00:02.288) Sushi: info Downloading hl7.terminology.r4#5.0.0... https://packages.fhir.org/hl7.terminology.r4/5.0.0 (00:02.289) Sushi: info Downloaded hl7.terminology.r4#5.0.0 (00:04.256) Sushi: info Loaded package hl7.terminology.r4#5.0.0 (00:05.547) Sushi: info Checking /root/.fhir/packages for hl7.fhir.r4.core#4.0.1... (00:05.547) Sushi: info Did not find hl7.fhir.r4.core#4.0.1 in /root/.fhir/packages. (00:05.866) Sushi: info Downloading hl7.fhir.r4.core#4.0.1... https://packages.fhir.org/hl7.fhir.r4.core/4.0.1 (00:05.866) Sushi: info Downloaded hl7.fhir.r4.core#4.0.1 (00:08.230) Sushi: info Loaded package hl7.fhir.r4.core#4.0.1 (00:09.941) Sushi: info Converting FSH to FHIR resources... (00:09.985) Sushi: info Converted 1 FHIR ValueSets. (00:10.036) Sushi: info Converted 22 FHIR instances. (00:10.700) Sushi: info Exporting FHIR resources as JSON... (00:10.700) Sushi: info Exported 23 FHIR resources as JSON. (00:10.706) Sushi: info Assembling Implementation Guide sources... (00:10.707) Sushi: info Generated ImplementationGuide-ihe.palm.rpc.json (00:10.713) Sushi: info Assembled Implementation Guide sources; ready for IG Publisher. (00:10.713) Sushi: (00:10.714) Sushi: ========================= SUSHI RESULTS =========================== (00:10.715) Sushi: | ------------------------------------------------------------- | (00:10.715) Sushi: | | Profiles | Extensions | Logicals | Resources | | (00:10.715) Sushi: | |-------------------------------------------------------------| | (00:10.715) Sushi: | | 0 | 0 | 0 | 0 | | (00:10.715) Sushi: | ------------------------------------------------------------- | (00:10.715) Sushi: | ------------------------------------------------------------- | (00:10.715) Sushi: | | ValueSets | CodeSystems | Instances | | (00:10.715) Sushi: | |-------------------------------------------------------------| | (00:10.715) Sushi: | | 1 | 0 | 22 | | (00:10.715) Sushi: | ------------------------------------------------------------- | (00:10.716) Sushi: | | (00:10.716) Sushi: =================================================================== (00:10.716) Sushi: | Don't get stuck in the doldrums. 0 Errors 1 Warning | (00:10.716) Sushi: =================================================================== (00:10.716) Sushi: (00:10.716) Unable to load IG as an r5 IG - try R4 (property code is a class com.google.gson.JsonPrimitive looking for an object) (00:11.281) Load Template from #ihe-template-no-numbers (00:11.768) Load Template from ihe.fhir.template#current (00:11.778) Installing ihe.fhir.template#current to the package cache Fetching: Installing: done. Load Template from fhir.base.template#current (00:12.199) Installing fhir.base.template#current to the package cache Fetching: .. Installing: .. done. onLoad.findSpreadsheets: onLoad.updateIg: [xslt] Processing /scratch/ig-build-temp-60UPDI/repo/template/onLoad-ig-working.xml to /scratch/ig-build-temp-60UPDI/repo/template/onLoad-ig-updated.xml [xslt] Loading stylesheet /scratch/ig-build-temp-60UPDI/repo/template/scripts/onLoad.xslt onLoad.extend: onLoad: Root directory: /scratch/ig-build-temp-60UPDI/repo (00:14.352) Core Package hl7.fhir.r4.core#4.0.1 Installing hl7.fhir.r4.core#4.0.1 to the package cache Fetching: .................................................................................................... Installing: .................................................................................................... done. Terminology Cache is at /scratch/ig-build-temp-60UPDI/repo/input-cache/txcache. Trimming now (00:26.404) Connect to Terminology Server at http://tx.fhir.org (00:26.405) Installing hl7.fhir.pubpack#0.1.4 to the package cache Fetching: .......... Installing: .......... done. Load Package hl7.fhir.pubpack#0.1.4 Installing hl7.fhir.xver-extensions#0.0.12 to the package cache Fetching: Installing: done. Load Package hl7.fhir.xver-extensions#0.0.12 Installing hl7.terminology.r4#5.0.0 to the package cache Fetching: .................................................................................... Installing: .................................................................................... done. Load Package hl7.terminology.r4#5.0.0 Installing hl7.fhir.uv.extensions.r4#1.0.0 to the package cache Fetching: .................................... Installing: .................................... done. Load Package hl7.fhir.uv.extensions.r4#1.0.0 Installing hl7.fhir.uv.tools#current to the package cache Fetching: .. Installing: .. done. Version mismatch. This IG is version 4.0.1, while the IG 'igtools' is from version 5.0.0 (will try to run anyway) (00:41.439) Load Package hl7.fhir.uv.tools#current Load R5 SpecialsInstalling hl7.fhir.r5.core#5.0.0 to the package cache Fetching: ............................................................................ Installing: ............................................................................ done. Initialization complete (00:51.987) Fetch http://profiles.ihe.net/PaLM/RPC/package-list.json for version check (00:51.989) Load Content (00:52.176) Loaded 24 files from /scratch/ig-build-temp-60UPDI/repo/fsh-generated/resources (00:52.653) loadPrePages from FetchedFile[/scratch/ig-build-temp-60UPDI/repo/fsh-generated/includes] as /scratch/ig-build-temp-60UPDI/repo/fsh-generated/includes loadPrePages from FetchedFile[/scratch/ig-build-temp-60UPDI/repo/input/pagecontent] as /scratch/ig-build-temp-60UPDI/repo/input/pagecontent Processing Conformance Resources (00:52.827) process type: NamingSystem (00:52.827) process type: CodeSystem (00:52.827) process type: ValueSet (00:52.827) process type: ConceptMap (00:52.827) process type: DataElement (00:52.828) process type: StructureDefinition (00:52.828) process type: OperationDefinition (00:52.828) process type: SearchParameter (00:52.828) process type: CapabilityStatement (00:52.828) process type: Conformance (00:52.828) process type: StructureMap (00:52.828) process type: ActivityDefinition (00:52.828) process type: Citation (00:52.828) process type: ChargeItemDefinition (00:52.828) process type: CompartmentDefinition (00:52.828) process type: ConceptMap (00:52.828) process type: ConditionDefinition (00:52.828) process type: EffectEvidenceSynthesis (00:52.828) process type: EventDefinition (00:52.829) process type: Evidence (00:52.829) process type: EvidenceVariable (00:52.829) process type: ExampleScenario (00:52.829) process type: GraphDefinition (00:52.829) process type: ImplementationGuide (00:52.829) process type: Library (00:52.829) process type: Measure (00:52.829) process type: MessageDefinition (00:52.829) process type: PlanDefinition (00:52.829) process type: Questionnaire (00:52.829) process type: ResearchDefinition (00:52.829) process type: ResearchElementDefinition (00:52.829) process type: RiskEvidenceSynthesis (00:52.829) process type: SearchParameter (00:52.830) process type: Statistic (00:52.830) process type: TerminologyCapabilities (00:52.830) process type: TestPlan (00:52.830) process type: TestScript (00:52.830) process type: ActorDefinition (00:52.830) process type: SubscriptionTopic (00:52.830) process type: Requirements (00:52.830) process res: ValueSet/RadPathGleason (00:52.831) process res: CapabilityStatement/IHE.FooBar.server (00:52.842) process res: CapabilityStatement/IHE.FooBar.client (00:52.871) process res: ImplementationGuide/ihe.palm.rpc (00:52.891) process res: Library/ScreeningImmunocompromisedLibrary (00:53.005) process res: Measure/MeasureProstateLesionSize (00:53.023) process res: Measure/MeasureGleason (00:53.040) process res: Measure/MeasureBreastLocationOfLesion (00:53.050) process res: Measure/MeasureBreastQuadrantAndClockFace (00:53.059) process res: Measure/MeasureProstateTumorLocation (00:53.068) process res: Measure/MeasureBreastDistanceFromTheNipple (00:53.077) process res: Measure/MeasureBreastLaterality (00:53.086) process res: Measure/MeasureProstateSize (00:53.095) Generating Snapshots (00:53.104) Generate Snapshots (00:53.104) R4/R4B Check (00:53.105) Propagating status (00:53.113) propagating status (00:53.113) Generating Narratives (00:53.113) gen narratives (00:53.113) narrative for /scratch/ig-build-temp-60UPDI/repo/fsh-generated/resources/ImplementationGuide-ihe.palm.rpc : ihe.palm.rpc (00:53.113) narrative for /scratch/ig-build-temp-60UPDI/repo/fsh-generated/resources/DiagnosticReport-eCCDiagnosticReport0 : eCCDiagnosticReport0 (00:53.253) narrative for /scratch/ig-build-temp-60UPDI/repo/fsh-generated/resources/Observation-PathEPE : PathEPE (00:53.291) narrative for /scratch/ig-build-temp-60UPDI/repo/fsh-generated/resources/Measure-MeasureProstateLesionSize : MeasureProstateLesionSize (00:53.306) narrative for /scratch/ig-build-temp-60UPDI/repo/fsh-generated/resources/Observation-PathObsSeminalVesicleInvasion : PathObsSeminalVesicleInvasion (00:53.358) narrative for /scratch/ig-build-temp-60UPDI/repo/fsh-generated/resources/Measure-MeasureGleason : MeasureGleason (00:53.372) narrative for /scratch/ig-build-temp-60UPDI/repo/fsh-generated/resources/Observation-RadEPE : RadEPE (00:53.386) narrative for /scratch/ig-build-temp-60UPDI/repo/fsh-generated/resources/Measure-MeasureBreastLocationOfLesion : MeasureBreastLocationOfLesion (00:53.399) narrative for /scratch/ig-build-temp-60UPDI/repo/fsh-generated/resources/Observation-PathGleason : PathGleason (00:53.412) narrative for /scratch/ig-build-temp-60UPDI/repo/fsh-generated/resources/Observation-PathLesionSize : PathLesionSize (00:53.425) narrative for /scratch/ig-build-temp-60UPDI/repo/fsh-generated/resources/Library-ScreeningImmunocompromisedLibrary : ScreeningImmunocompromisedLibrary (00:53.479) narrative for /scratch/ig-build-temp-60UPDI/repo/fsh-generated/resources/CapabilityStatement-IHE.FooBar.server : IHE.FooBar.server (00:53.482) narrative for /scratch/ig-build-temp-60UPDI/repo/fsh-generated/resources/Observation-RadSeminalVesicleInvasion : RadSeminalVesicleInvasion (00:53.482) narrative for /scratch/ig-build-temp-60UPDI/repo/fsh-generated/resources/MeasureReport-RadObsMeasureReport : RadObsMeasureReport (00:53.492) narrative for /scratch/ig-build-temp-60UPDI/repo/fsh-generated/resources/Measure-MeasureBreastQuadrantAndClockFace : MeasureBreastQuadrantAndClockFace (00:53.500) narrative for /scratch/ig-build-temp-60UPDI/repo/fsh-generated/resources/CapabilityStatement-IHE.FooBar.client : IHE.FooBar.client (00:53.509) narrative for /scratch/ig-build-temp-60UPDI/repo/fsh-generated/resources/Measure-MeasureProstateTumorLocation : MeasureProstateTumorLocation (00:53.509) narrative for /scratch/ig-build-temp-60UPDI/repo/fsh-generated/resources/Observation-RadLeasionSize : RadLeasionSize (00:53.517) narrative for /scratch/ig-build-temp-60UPDI/repo/fsh-generated/resources/Measure-MeasureBreastDistanceFromTheNipple : MeasureBreastDistanceFromTheNipple (00:53.526) narrative for /scratch/ig-build-temp-60UPDI/repo/fsh-generated/resources/ValueSet-RadPathGleason : RadPathGleason (00:53.533) narrative for /scratch/ig-build-temp-60UPDI/repo/fsh-generated/resources/Measure-MeasureBreastLaterality : MeasureBreastLaterality (00:53.630) narrative for /scratch/ig-build-temp-60UPDI/repo/fsh-generated/resources/DiagnosticReport-RadDiagnosticReport0 : RadDiagnosticReport0 (00:53.638) narrative for /scratch/ig-build-temp-60UPDI/repo/fsh-generated/resources/Measure-MeasureProstateSize : MeasureProstateSize (00:53.652) narrative for /scratch/ig-build-temp-60UPDI/repo/fsh-generated/resources/Observation-RadGleason : RadGleason (00:53.659) Validating Conformance Resources (00:53.667) validate res: ValueSet/RadPathGleason (00:53.667) validate res: CapabilityStatement/IHE.FooBar.server (00:54.175) validate res: CapabilityStatement/IHE.FooBar.client (00:54.276) validate res: ImplementationGuide/ihe.palm.rpc (00:54.299) validate res: Library/ScreeningImmunocompromisedLibrary (00:55.114) validate res: Measure/MeasureProstateLesionSize (00:55.185) validate res: Measure/MeasureGleason (00:55.198) validate res: Measure/MeasureBreastLocationOfLesion (00:55.224) validate res: Measure/MeasureBreastQuadrantAndClockFace (00:55.232) validate res: Measure/MeasureProstateTumorLocation (00:55.239) validate res: Measure/MeasureBreastDistanceFromTheNipple (00:55.246) validate res: Measure/MeasureBreastLaterality (00:55.253) validate res: Measure/MeasureProstateSize (00:55.260) check profiles & code systems (00:55.267) check profiles & code systems (00:55.267) check profiles & code systems (00:55.267) validate Expressions (00:55.273) scanForUsageStats (00:55.273) Validating Resources (00:55.275) .. validate /scratch/ig-build-temp-60UPDI/repo/fsh-generated/resources/ImplementationGuide-ihe.palm.rpc (00:55.275) .. /scratch/ig-build-temp-60UPDI/repo/fsh-generated/resources/ImplementationGuide-ihe.palm.rpc (00:55.275) .. validate /scratch/ig-build-temp-60UPDI/repo/fsh-generated/resources/DiagnosticReport-eCCDiagnosticReport0 (00:55.275) .. /scratch/ig-build-temp-60UPDI/repo/fsh-generated/resources/DiagnosticReport-eCCDiagnosticReport0 (00:55.275) validating DiagnosticReport/eCCDiagnosticReport0 (00:55.275) .. validate /scratch/ig-build-temp-60UPDI/repo/fsh-generated/resources/Observation-PathEPE (00:55.407) .. /scratch/ig-build-temp-60UPDI/repo/fsh-generated/resources/Observation-PathEPE (00:55.407) validating Observation/PathEPE (00:55.407) .. validate /scratch/ig-build-temp-60UPDI/repo/fsh-generated/resources/Measure-MeasureProstateLesionSize (00:55.477) .. /scratch/ig-build-temp-60UPDI/repo/fsh-generated/resources/Measure-MeasureProstateLesionSize (00:55.477) .. validate /scratch/ig-build-temp-60UPDI/repo/fsh-generated/resources/Observation-PathObsSeminalVesicleInvasion (00:55.477) .. /scratch/ig-build-temp-60UPDI/repo/fsh-generated/resources/Observation-PathObsSeminalVesicleInvasion (00:55.477) validating Observation/PathObsSeminalVesicleInvasion (00:55.477) .. validate /scratch/ig-build-temp-60UPDI/repo/fsh-generated/resources/Measure-MeasureGleason (00:55.500) .. /scratch/ig-build-temp-60UPDI/repo/fsh-generated/resources/Measure-MeasureGleason (00:55.500) .. validate /scratch/ig-build-temp-60UPDI/repo/fsh-generated/resources/Observation-RadEPE (00:55.500) .. /scratch/ig-build-temp-60UPDI/repo/fsh-generated/resources/Observation-RadEPE (00:55.500) validating Observation/RadEPE (00:55.501) .. validate /scratch/ig-build-temp-60UPDI/repo/fsh-generated/resources/Measure-MeasureBreastLocationOfLesion (00:55.506) .. /scratch/ig-build-temp-60UPDI/repo/fsh-generated/resources/Measure-MeasureBreastLocationOfLesion (00:55.506) .. validate /scratch/ig-build-temp-60UPDI/repo/fsh-generated/resources/Observation-PathGleason (00:55.506) .. /scratch/ig-build-temp-60UPDI/repo/fsh-generated/resources/Observation-PathGleason (00:55.507) validating Observation/PathGleason (00:55.507) .. validate /scratch/ig-build-temp-60UPDI/repo/fsh-generated/resources/Observation-PathLesionSize (00:55.533) .. /scratch/ig-build-temp-60UPDI/repo/fsh-generated/resources/Observation-PathLesionSize (00:55.533) validating Observation/PathLesionSize (00:55.533) .. validate /scratch/ig-build-temp-60UPDI/repo/fsh-generated/resources/Library-ScreeningImmunocompromisedLibrary (00:55.585) .. /scratch/ig-build-temp-60UPDI/repo/fsh-generated/resources/Library-ScreeningImmunocompromisedLibrary (00:55.585) .. validate /scratch/ig-build-temp-60UPDI/repo/fsh-generated/resources/CapabilityStatement-IHE.FooBar.server (00:55.585) .. /scratch/ig-build-temp-60UPDI/repo/fsh-generated/resources/CapabilityStatement-IHE.FooBar.server (00:55.586) .. validate /scratch/ig-build-temp-60UPDI/repo/fsh-generated/resources/Observation-RadSeminalVesicleInvasion (00:55.586) .. /scratch/ig-build-temp-60UPDI/repo/fsh-generated/resources/Observation-RadSeminalVesicleInvasion (00:55.586) validating Observation/RadSeminalVesicleInvasion (00:55.586) .. validate /scratch/ig-build-temp-60UPDI/repo/fsh-generated/resources/MeasureReport-RadObsMeasureReport (00:55.592) .. /scratch/ig-build-temp-60UPDI/repo/fsh-generated/resources/MeasureReport-RadObsMeasureReport (00:55.592) validating MeasureReport/RadObsMeasureReport (00:55.592) .. validate /scratch/ig-build-temp-60UPDI/repo/fsh-generated/resources/Measure-MeasureBreastQuadrantAndClockFace (00:55.632) .. /scratch/ig-build-temp-60UPDI/repo/fsh-generated/resources/Measure-MeasureBreastQuadrantAndClockFace (00:55.632) .. validate /scratch/ig-build-temp-60UPDI/repo/fsh-generated/resources/CapabilityStatement-IHE.FooBar.client (00:55.632) .. /scratch/ig-build-temp-60UPDI/repo/fsh-generated/resources/CapabilityStatement-IHE.FooBar.client (00:55.632) .. validate /scratch/ig-build-temp-60UPDI/repo/fsh-generated/resources/Measure-MeasureProstateTumorLocation (00:55.632) .. /scratch/ig-build-temp-60UPDI/repo/fsh-generated/resources/Measure-MeasureProstateTumorLocation (00:55.632) .. validate /scratch/ig-build-temp-60UPDI/repo/fsh-generated/resources/Observation-RadLeasionSize (00:55.632) .. /scratch/ig-build-temp-60UPDI/repo/fsh-generated/resources/Observation-RadLeasionSize (00:55.632) validating Observation/RadLeasionSize (00:55.632) .. validate /scratch/ig-build-temp-60UPDI/repo/fsh-generated/resources/Measure-MeasureBreastDistanceFromTheNipple (00:55.640) .. /scratch/ig-build-temp-60UPDI/repo/fsh-generated/resources/Measure-MeasureBreastDistanceFromTheNipple (00:55.640) .. validate /scratch/ig-build-temp-60UPDI/repo/fsh-generated/resources/ValueSet-RadPathGleason (00:55.640) .. /scratch/ig-build-temp-60UPDI/repo/fsh-generated/resources/ValueSet-RadPathGleason (00:55.640) .. validate /scratch/ig-build-temp-60UPDI/repo/fsh-generated/resources/Measure-MeasureBreastLaterality (00:55.640) .. /scratch/ig-build-temp-60UPDI/repo/fsh-generated/resources/Measure-MeasureBreastLaterality (00:55.640) .. validate /scratch/ig-build-temp-60UPDI/repo/fsh-generated/resources/DiagnosticReport-RadDiagnosticReport0 (00:55.640) .. /scratch/ig-build-temp-60UPDI/repo/fsh-generated/resources/DiagnosticReport-RadDiagnosticReport0 (00:55.640) validating DiagnosticReport/RadDiagnosticReport0 (00:55.640) .. validate /scratch/ig-build-temp-60UPDI/repo/fsh-generated/resources/Measure-MeasureProstateSize (00:55.713) .. /scratch/ig-build-temp-60UPDI/repo/fsh-generated/resources/Measure-MeasureProstateSize (00:55.714) .. validate /scratch/ig-build-temp-60UPDI/repo/fsh-generated/resources/Observation-RadGleason (00:55.714) .. /scratch/ig-build-temp-60UPDI/repo/fsh-generated/resources/Observation-RadGleason (00:55.714) validating Observation/RadGleason (00:55.714) .. check Profile Examples (00:55.720) gen narratives (00:55.720) Processing Provenance Records (00:55.720) Generating Outputs in /scratch/ig-build-temp-60UPDI/repo/output (00:55.720) Generate 1 (00:55.801) Produce resources for ImplementationGuide/ihe.palm.rpc (00:55.801) Produce resources for DiagnosticReport/eCCDiagnosticReport0 (00:55.903) Produce resources for Observation/PathEPE (00:55.914) Produce resources for Measure/MeasureProstateLesionSize (00:55.922) Produce resources for Observation/PathObsSeminalVesicleInvasion (00:55.933) Produce resources for Measure/MeasureGleason (00:55.940) Produce resources for Observation/RadEPE (00:55.952) Produce resources for Measure/MeasureBreastLocationOfLesion (00:55.959) Produce resources for Observation/PathGleason (00:55.970) Produce resources for Observation/PathLesionSize (00:55.978) Produce resources for Library/ScreeningImmunocompromisedLibrary (00:55.984) Produce resources for CapabilityStatement/IHE.FooBar.server (00:55.994) Produce resources for Observation/RadSeminalVesicleInvasion (00:56.007) Produce resources for MeasureReport/RadObsMeasureReport (00:56.014) Produce resources for Measure/MeasureBreastQuadrantAndClockFace (00:56.023) Produce resources for CapabilityStatement/IHE.FooBar.client (00:56.034) Produce resources for Measure/MeasureProstateTumorLocation (00:56.046) Produce resources for Observation/RadLeasionSize (00:56.057) Produce resources for Measure/MeasureBreastDistanceFromTheNipple (00:56.063) Produce resources for ValueSet/RadPathGleason (00:56.074) Produce resources for Measure/MeasureBreastLaterality (00:56.079) Produce resources for DiagnosticReport/RadDiagnosticReport0 (00:56.089) Produce resources for Measure/MeasureProstateSize (00:56.098) Produce resources for Observation/RadGleason (00:56.108) Run Template (00:56.115) onGenerate.checkVersions: [xslt] Processing /scratch/ig-build-temp-60UPDI/repo/template/onGenerate-ig-working.xml to /scratch/ig-build-temp-60UPDI/repo/template/versions.txt [xslt] Loading stylesheet /scratch/ig-build-temp-60UPDI/repo/template/scripts/onGenerate.getVersions.xslt [mkdir] Created dir: /scratch/ig-build-temp-60UPDI/repo/input-cache/schemas onGenerate.r5-schemas: [mkdir] Created dir: /scratch/ig-build-temp-60UPDI/repo/input-cache/schemas/R5 [get] Getting: http://build.fhir.org/fhir-single.xsd [get] To: /scratch/ig-build-temp-60UPDI/repo/input-cache/schemas/R5/fhir-single.xsd [get] Getting: http://build.fhir.org/fhir-xhtml.xsd [get] To: /scratch/ig-build-temp-60UPDI/repo/input-cache/schemas/R5/fhir-xhtml.xsd [get] Getting: http://build.fhir.org/xml.xsd [get] To: /scratch/ig-build-temp-60UPDI/repo/input-cache/schemas/R5/xml.xsd [get] Getting: http://build.fhir.org/xmldsig-core-schema.xsd [get] To: /scratch/ig-build-temp-60UPDI/repo/input-cache/schemas/R5/xmldsig-core-schema.xsd onGenerate.r4-schemas: [mkdir] Created dir: /scratch/ig-build-temp-60UPDI/repo/input-cache/schemas/R4 [get] Getting: http://hl7.org/fhir/R4/fhir-single.xsd [get] To: /scratch/ig-build-temp-60UPDI/repo/input-cache/schemas/R4/fhir-single.xsd [get] Getting: http://hl7.org/fhir/R4/fhir-xhtml.xsd [get] To: /scratch/ig-build-temp-60UPDI/repo/input-cache/schemas/R4/fhir-xhtml.xsd [get] Getting: http://hl7.org/fhir/R4/xml.xsd [get] To: /scratch/ig-build-temp-60UPDI/repo/input-cache/schemas/R4/xml.xsd [get] Getting: http://hl7.org/fhir/R4/xmldsig-core-schema.xsd [get] To: /scratch/ig-build-temp-60UPDI/repo/input-cache/schemas/R4/xmldsig-core-schema.xsd onGenerate.r3-schemas: onGenerate.r2b-schemas: onGenerate.r2-schemas: onGenerate.schemas: onGenerate.data: [xslt] Processing /scratch/ig-build-temp-60UPDI/repo/template/onGenerate-ig-working.xml to /scratch/ig-build-temp-60UPDI/repo/temp/pages/_data/artifacts.json [xslt] Loading stylesheet /scratch/ig-build-temp-60UPDI/repo/template/scripts/onGenerate.data.xslt onGenerate.setup: onGenerate.infoFile: [xslt] Processing /scratch/ig-build-temp-60UPDI/repo/template/onGenerate-ig-working.xml to /scratch/ig-build-temp-60UPDI/repo/temp/pages/_data/info.json [xslt] Loading stylesheet /scratch/ig-build-temp-60UPDI/repo/template/scripts/onGenerate.genJson.xslt onGenerate.processIncludes: [copy] Copying 17 files to /scratch/ig-build-temp-60UPDI/repo/temp/pages/_includes onGenerate.processIg: [xslt] Processing /scratch/ig-build-temp-60UPDI/repo/template/onGenerate-ig-working.xml to /scratch/ig-build-temp-60UPDI/repo/template/onGenerate-ig-working.1.xml [xslt] Loading stylesheet /scratch/ig-build-temp-60UPDI/repo/template/scripts/onGenerate.group.xslt [xslt] Processing /scratch/ig-build-temp-60UPDI/repo/template/onGenerate-ig-working.1.xml to /scratch/ig-build-temp-60UPDI/repo/template/onGenerate-ig-updated.xml [xslt] Loading stylesheet /scratch/ig-build-temp-60UPDI/repo/template/scripts/onGenerate.final.xslt onGenerate.igQa: [xslt] Processing /scratch/ig-build-temp-60UPDI/repo/template/onGenerate-ig-updated.xml to /scratch/ig-build-temp-60UPDI/repo/template/ongenerate-validation-igqa.json [xslt] Loading stylesheet /scratch/ig-build-temp-60UPDI/repo/template/scripts/onGenerate.qa.xslt onGenerate.artifactList: [xslt] Processing /scratch/ig-build-temp-60UPDI/repo/template/onGenerate-ig-updated.xml to /scratch/ig-build-temp-60UPDI/repo/temp/pages/_includes/artifacts.xml [xslt] Loading stylesheet /scratch/ig-build-temp-60UPDI/repo/template/scripts/createArtifactSummary.xslt check-plantumlfiles: onGenerate.plantUml.ig: onGenerate.plantUml.template: onGenerate.plantUml: onGenerate.copyDataFiles: onGenerate.extend: onGenerate: Template Done (00:57.946) Generate 2 (00:57.947) Produce outputs for ImplementationGuide/ihe.palm.rpc (00:57.948) Produce outputs for DiagnosticReport/eCCDiagnosticReport0 (00:58.059) Produce outputs for Observation/PathEPE (00:58.076) Produce outputs for Measure/MeasureProstateLesionSize (00:58.089) Produce outputs for Observation/PathObsSeminalVesicleInvasion (00:58.117) Produce outputs for Measure/MeasureGleason (00:58.125) Produce outputs for Observation/RadEPE (00:58.145) Produce outputs for Measure/MeasureBreastLocationOfLesion (00:58.153) Produce outputs for Observation/PathGleason (00:58.169) Produce outputs for Observation/PathLesionSize (00:58.177) Produce outputs for Library/ScreeningImmunocompromisedLibrary (00:58.185) Produce outputs for CapabilityStatement/IHE.FooBar.server (00:58.193) Produce outputs for Observation/RadSeminalVesicleInvasion (00:58.224) Produce outputs for MeasureReport/RadObsMeasureReport (00:58.232) Produce outputs for Measure/MeasureBreastQuadrantAndClockFace (00:58.246) Produce outputs for CapabilityStatement/IHE.FooBar.client (00:58.262) Produce outputs for Measure/MeasureProstateTumorLocation (00:58.273) Produce outputs for Observation/RadLeasionSize (00:58.288) Produce outputs for Measure/MeasureBreastDistanceFromTheNipple (00:58.296) Produce outputs for ValueSet/RadPathGleason (00:58.311) Produce outputs for Measure/MeasureBreastLaterality (01:05.037) Produce outputs for DiagnosticReport/RadDiagnosticReport0 (01:05.057) Produce outputs for Measure/MeasureProstateSize (01:05.073) Produce outputs for Observation/RadGleason (01:05.089) Generate Summaries (01:05.106) Generating Summary Outputs (01:05.107) Sending Usage Stats to Server (01:07.501) ## Memory (MB): Use = 1092, Free = 17907, Total = 19008, Max =19008 Reclaiming memory... ## Memory (MB): Use = 631, Free = 18376, Total = 19008, Max =19008 Run jekyll: jekyll build --destination "/scratch/ig-build-temp-60UPDI/repo/output" (in folder /scratch/ig-build-temp-60UPDI/repo/temp/pages) (01:07.777) Jekyll: Source: /scratch/ig-build-temp-60UPDI/repo/temp/pages (01:08.085) Jekyll: Generating... (01:08.085) Jekyll: done in 0.471 seconds. (01:08.556) Checking Output HTML (01:09.323) found 726 files (01:09.327) ........................................ ........................................ ... 726 html files, 0 pages invalid xhtml (0%) (01:11.088) ... 10584 links, 161 broken links (1%) (01:11.088) Build final .zip (01:11.088) Final .zip built (01:11.334) Built. Times: loading: 00:00.650, generate: 00:20.011, narrative generation: 00:00.553, realm-rules: 00:00.000, previous-version: 00:00.000, jekyll: 00:00.784, validation: 00:02.038 (#24), template: 00:01.831 (#3) (01:12.845) Validation output in /scratch/ig-build-temp-60UPDI/repo/output/qa.html Errors: 47, Warnings: 95, Info: 1, Broken Links: 161 (01:13.192) Finished (01:13.198) Done (01:13.198)