Genomics Reporting Implementation Guide
4.0.0-cibuild - CI Build

Genomics Reporting Implementation Guide, published by HL7 International / Clinical Genomics. This guide is not an authorized publication; it is the continuous build for version 4.0.0-cibuild built by the FHIR (HL7® FHIR® Standard) CI Build. This version is based on the current content of https://github.com/HL7/genomics-reporting/ and changes regularly. See the Directory of published versions

## ValueSet: Molecular Biomarker Categories (Experimental)

Official URL: http://hl7.org/fhir/uv/genomics-reporting/ValueSet/molecular-biomarker-category-vs | Version: 4.0.0-cibuild
Standards status: Informative | Computable Name: MolecularBiomarkerCategoryVS

This value set is drawn from the Molecular Biomarker Ontology code system, which provides codes that characterize a molecular biomarker.

References

- Molecular Biomarker

### Logical Definition (CLD)

- Include all codes defined in `http://hl7.org/fhir/uv/genomics-reporting/CodeSystem/molecular-biomarker-ontology-cs` version 📦4.0.0-cibuild

### Expansion

Expansion performed internally based on codesystem Molecular Biomarker Ontology Codes v4.0.0-cibuild (CodeSystem)

This value set contains 17 concepts

Level | System | Code | Display (en) | JSON | XML
1 | `http://hl7.org/fhir/uv/genomics-reporting/CodeSystem/molecular-biomarker-ontology-cs` | _physiologyBiomarkerCategory | Molecular biomarker physiologic role category |  |
2 | `http://hl7.org/fhir/uv/genomics-reporting/CodeSystem/molecular-biomarker-ontology-cs` | antibody | antibody category |  |
2 | `http://hl7.org/fhir/uv/genomics-reporting/CodeSystem/molecular-biomarker-ontology-cs` | antgen | antigen category |  |
2 | `http://hl7.org/fhir/uv/genomics-reporting/CodeSystem/molecular-biomarker-ontology-cs` | cellReceptor | cell receptor category |  |
2 | `http://hl7.org/fhir/uv/genomics-reporting/CodeSystem/molecular-biomarker-ontology-cs` | cellReceptorLigand | cell receptor ligand category |  |
1 | `http://hl7.org/fhir/uv/genomics-reporting/CodeSystem/molecular-biomarker-ontology-cs` | _moleculeTypeBiomarkerCategory | Molecular biomarker molecular type category |  |
2 | `http://hl7.org/fhir/uv/genomics-reporting/CodeSystem/molecular-biomarker-ontology-cs` | carbohydrate | carbohydrate category |  |
2 | `http://hl7.org/fhir/uv/genomics-reporting/CodeSystem/molecular-biomarker-ontology-cs` | lipid | lipid category |  |
2 | `http://hl7.org/fhir/uv/genomics-reporting/CodeSystem/molecular-biomarker-ontology-cs` | nucleicAcid | nucleic acid category |  |
2 | `http://hl7.org/fhir/uv/genomics-reporting/CodeSystem/molecular-biomarker-ontology-cs` | protein | protein category |  |
1 | `http://hl7.org/fhir/uv/genomics-reporting/CodeSystem/molecular-biomarker-ontology-cs` | _methodBiomarkerCategory | Molecular biomarker method type category |  |
2 | `http://hl7.org/fhir/uv/genomics-reporting/CodeSystem/molecular-biomarker-ontology-cs` | enzymeAssay | enzyme assay category |  |
2 | `http://hl7.org/fhir/uv/genomics-reporting/CodeSystem/molecular-biomarker-ontology-cs` | flowCytometry | flow cytometry category |  |
2 | `http://hl7.org/fhir/uv/genomics-reporting/CodeSystem/molecular-biomarker-ontology-cs` | immuneStain | immune stain category |  |
2 | `http://hl7.org/fhir/uv/genomics-reporting/CodeSystem/molecular-biomarker-ontology-cs` | immunoassay | immunoassay category |  |
2 | `http://hl7.org/fhir/uv/genomics-reporting/CodeSystem/molecular-biomarker-ontology-cs` | methylationAnalysis | methylation analysis category |  |
2 | `http://hl7.org/fhir/uv/genomics-reporting/CodeSystem/molecular-biomarker-ontology-cs` | molgen | molecular sequence adjacent category |  |

Explanation of the columns that may appear on this page:

Level | A few code lists that FHIR defines are hierarchical - each code is assigned a level. In this scheme, some codes are under other codes, and imply that the code they are under also applies
System | The source of the definition of the code (when the value set draws in codes defined elsewhere)
Code | The code (used as the code in the resource instance)
Display | The display (used in the display element of a Coding). If there is no display, implementers should not simply display the code, but map the concept into their application
Definition | An explanation of the meaning of the concept
Comments | Additional notes about how to use the code