Genomics Reporting Implementation Guide
4.0.0-cibuild - CI Build

Genomics Reporting Implementation Guide, published by HL7 International / Clinical Genomics. This guide is not an authorized publication; it is the continuous build for version 4.0.0-cibuild built by the FHIR (HL7® FHIR® Standard) CI Build. This version is based on the current content of https://github.com/HL7/genomics-reporting/ and changes regularly. See the Directory of published versions

## : genotype-hla-a-glstring-r4 - XML Representation

Page standards status: Informative

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    <Observation xmlns="http://hl7.org/fhir">
      <id value="genotype-hla-a-glstring-r4"/>
      <meta>
        <profile
                 value="http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/genotype"/>
      </meta>
      <text>
        <status value="generated"/>
        <div xmlns="http://www.w3.org/1999/xhtml"><p class="res-header-id"><b>Generated Narrative: Observation genotype-hla-a-glstring-r4</b></p><a name="genotype-hla-a-glstring-r4"> </a><a name="hcgenotype-hla-a-glstring-r4"> </a><div style="display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%"><p style="margin-bottom: 0px"/><p style="margin-bottom: 0px">Profile: <a href="StructureDefinition-genotype.html">Genotype</a></p></div><p><b>status</b>: Final</p><p><b>category</b>: <span title="Codes:{http://terminology.hl7.org/CodeSystem/observation-category laboratory}">Laboratory</span>, <span title="Codes:{http://terminology.hl7.org/CodeSystem/v2-0074 GE}">Genetics</span></p><p><b>code</b>: <span title="Codes:{http://loinc.org 84413-4}, {http://loinc.org 57290-9}">Genotype display name</span></p><p><b>subject</b>: <a href="Patient-ExamplePatient.html">Anonymous Patient (no stated gender), DoB Unknown</a></p><p><b>effective</b>: 2018-07-26</p><p><b>performer</b>: aTypingLab, Inc</p><p><b>value</b>: <span title="Codes:{http://glstring.org hla#3.31.0#HLA-A*03:01:01:01+HLA-A*30:01:01}">hla#3.31.0#HLA-A*03:01:01:01+HLA-A*30:01:01</span></p><p><b>method</b>: <span title="Codes:">PACBIO Sequel</span></p><p><b>specimen</b>: <a href="Specimen-specimen-hla-r4.html">Specimen: identifier = http://example.org#001^123456789; type = Buccal smear sample; receivedTime = 2018-05-01</a></p><p><b>derivedFrom</b>: <a href="Observation-haplotype-hla-a-1-r4.html">Observation Haplotype name</a></p><h3>Components</h3><table class="grid"><tr><td style="display: none">-</td><td><b>Code</b></td><td><b>Value[x]</b></td></tr><tr><td style="display: none">*</td><td><span title="Codes:{http://loinc.org 48018-6}">Gene studied [ID]</span></td><td><span title="Codes:{http://www.genenames.org HGNC:4931}">HLA-A</span></td></tr></table></div>
      </text>
      <status value="final"/>
      <category>
        <coding>
          <system
                  value="http://terminology.hl7.org/CodeSystem/observation-category"/>
          <code value="laboratory"/>
        </coding>
      </category>
      <category>
        <coding>
          <system value="http://terminology.hl7.org/CodeSystem/v2-0074"/>
          <code value="GE"/>
        </coding>
      </category>
      <code>
        <coding>
          <system value="http://loinc.org"/>
          <code value="84413-4"/>
          <display value="Genotype display name"/>
        </coding>
        <coding>
          <system value="http://loinc.org"/>
          <code value="57290-9"/>
          <display value="HLA-A [Type] by High resolution"/>
        </coding>
      </code>
      <subject>🔗
        <reference value="Patient/ExamplePatient"/>
      </subject>
      <effectiveDateTime value="2018-07-26"/>
      <performer>
        <type value="Organization"/>
        <display value="aTypingLab, Inc"/>
      </performer>
      <valueCodeableConcept>
        <coding>
          <system value="http://glstring.org"/>
          <version value="1.0"/>
          <code value="hla#3.31.0#HLA-A*03:01:01:01+HLA-A*30:01:01"/>
        </coding>
      </valueCodeableConcept>
      <method>
        <text value="PACBIO Sequel"/>
      </method>
      <specimen>🔗
        <reference value="Specimen/specimen-hla-r4"/>
      </specimen>
      <derivedFrom>🔗
        <reference value="Observation/haplotype-hla-a-1-r4"/>
      </derivedFrom>
      <component>
        <code>
          <coding>
            <system value="http://loinc.org"/>
            <code value="48018-6"/>
            <display value="Gene studied [ID]"/>
          </coding>
        </code>
        <valueCodeableConcept>
          <coding>
            <system value="http://www.genenames.org"/>
            <code value="HGNC:4931"/>
            <display value="HLA-A"/>
          </coding>
        </valueCodeableConcept>
      </component>
    </Observation>