Genomics Reporting Implementation Guide
4.0.0-cibuild - CI Build

Genomics Reporting Implementation Guide, published by HL7 International / Clinical Genomics. This guide is not an authorized publication; it is the continuous build for version 4.0.0-cibuild built by the FHIR (HL7® FHIR® Standard) CI Build. This version is based on the current content of https://github.com/HL7/genomics-reporting/ and changes regularly. See the Directory of published versions

## : genomicSpecimen - TTL Representation

Page standards status: Informative

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    @prefix fhir: <http://hl7.org/fhir/> .
    @prefix owl: <http://www.w3.org/2002/07/owl#> .
    @prefix rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#> .
    @prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> .
    @prefix sct: <http://snomed.info/id/> .
    @prefix xsd: <http://www.w3.org/2001/XMLSchema#> .

    # - resource -------------------------------------------------------------------

     a fhir:Specimen ;
      fhir:nodeRole fhir:treeRoot ;
      fhir:id [ fhir:v "genomicSpecimen"] ; #
      fhir:text [
    fhir:status [ fhir:v "generated" ] ;
    fhir:div [ fhir:v "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p class=\"res-header-id\"><b>Generated Narrative: Specimen genomicSpecimen</b></p><a name=\"genomicSpecimen\"> </a><a name=\"hcgenomicSpecimen\"> </a><p><b>identifier</b>: <code>http://example.org/identifiers/specimens</code>/4</p><p><b>status</b>: Available</p><p><b>type</b>: <span title=\"Codes:{http://snomed.info/sct 122610009}\">Specimen from lung obtained by biopsy (specimen)</span></p><p><b>subject</b>: <a href=\"Patient-genomicPatient.html\">John Doe</a></p><p><b>receivedTime</b>: 2019-03-01 01:01:01+0000</p><p><b>request</b>: <a href=\"ServiceRequest-genomicServiceRequest.html\">ServiceRequest Molecular genetic test (procedure)</a></p><h3>Collections</h3><table class=\"grid\"><tr><td style=\"display: none\">-</td><td><b>Collector</b></td><td><b>Collected[x]</b></td><td><b>Quantity</b></td><td><b>Method</b></td></tr><tr><td style=\"display: none\">*</td><td><a href=\"Practitioner-practitioner02.html\">Practitioner Jane Doel </a></td><td>2019-03-01 01:01:00+0000</td><td>1 mm2</td><td><span title=\"Codes:{http://snomed.info/sct 129314006}\">Biopsy - action</span></td></tr></table></div>"^^rdf:XMLLiteral ]
      ] ; #
      fhir:identifier ( [
    fhir:system [
    fhir:v "http://example.org/identifiers/specimens"^^xsd:anyURI ;
    fhir:l <http://example.org/identifiers/specimens>     ] ;
    fhir:value [ fhir:v "4" ]
      ] ) ; #
      fhir:status [ fhir:v "available"] ; #
      fhir:type [
        ( fhir:coding [
    a sct:122610009 ;
    fhir:system [
    fhir:v "http://snomed.info/sct"^^xsd:anyURI ;
    fhir:l <http://snomed.info/sct>       ] ;
    fhir:code [ fhir:v "122610009" ] ;
    fhir:display [ fhir:v "Specimen from lung obtained by biopsy (specimen)" ]     ] )
      ] ; #
      fhir:subject [
    fhir:l fhir:Patient/genomicPatient ;
    fhir:reference [ fhir:v "Patient/genomicPatient" ] ;
    fhir:display [ fhir:v "John Doe" ]
      ] ; #
      fhir:receivedTime [ fhir:v "2019-03-01T01:01:01Z"^^xsd:dateTime] ; #
      fhir:request ( [
    fhir:l fhir:ServiceRequest/genomicServiceRequest ;
    fhir:reference [ fhir:v "ServiceRequest/genomicServiceRequest" ]
      ] ) ; #
      fhir:collection [
    fhir:collector [
    fhir:l fhir:Practitioner/practitioner02 ;
    fhir:reference [ fhir:v "Practitioner/practitioner02" ]     ] ;
    fhir:collected [
    a fhir:DateTime ;
    fhir:v "2019-03-01T01:01:00Z"^^xsd:dateTime     ] ;
    fhir:quantity [
    fhir:value [ fhir:v "1"^^xsd:decimal ] ;
    fhir:unit [ fhir:v "mm2" ]     ] ;
    fhir:method [
          ( fhir:coding [
    a sct:129314006 ;
    fhir:system [
    fhir:v "http://snomed.info/sct"^^xsd:anyURI ;
    fhir:l <http://snomed.info/sct>         ] ;
    fhir:code [ fhir:v "129314006" ] ;
    fhir:display [ fhir:v "Biopsy - action" ]       ] )     ]
      ] . #