INFO:root:about to clone! DEBUG:root:running: git clone --recursive https://github.com/HL7/fhir-military-service --branch master repo DEBUG:root:Time to deadline 35879.997253 seconds Cloning into 'repo'... DEBUG:root:running: wget -q https://github.com/HL7/fhir-ig-publisher/releases/latest/download/publisher.jar -O publisher.jar DEBUG:root:Time to deadline 35878.772599 seconds DEBUG:root:running: npm -g install fsh-sushi DEBUG:root:Time to deadline 35877.448229 seconds npm WARN deprecated glob@7.2.3: Glob versions prior to v9 are no longer supported npm WARN deprecated inflight@1.0.6: This module is not supported, and leaks memory. Do not use it. Check out lru-cache if you want a good and tested way to coalesce async requests by a key value, which is much more comprehensive and powerful. npm WARN deprecated rimraf@2.6.3: Rimraf versions prior to v4 are no longer supported added 139 packages in 8s 14 packages are looking for funding run `npm fund` for details npm notice npm notice New major version of npm available! 9.8.1 -> 11.6.1 npm notice Changelog: npm notice Run `npm install -g npm@11.6.1` to update! npm notice DEBUG:root:running: java -Xms19000m -Xmx19000m -jar ../publisher.jar -ig ig.json -api-key-file /etc/ig.builder.keyfile.ini -fhir-settings /etc/fhir-settings.json -auto-ig-build -tx http://tx.fhir.org -target https://build.fhir.org/ig/HL7/fhir-military-service/ -out /scratch/repo DEBUG:root:Time to deadline 35868.579353 seconds FHIR IG Publisher Version 2.0.19 (Git# e7076c8963f4). Built 2025-10-03T18:07:42.122Z (67 hours old) Detected Java version: 21-ea from /usr/local/openjdk-21 on Linux/amd64 (64bit). 19008MB available dir = /scratch/repo, path = /usr/local/openjdk-21/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin Parameters: -ig ig.json -api-key-file /etc/ig.builder.keyfile.ini -fhir-settings /etc/fhir-settings.json -auto-ig-build -tx http://tx.fhir.org -target https://build.fhir.org/ig/HL7/fhir-military-service/ -out /scratch/repo Character encoding = UTF-8 / UTF-8 Start Clock @ Monday, October 6, 2025, 1:13:59 PM Coordinated Universal Time (2025-10-06T13:13:59Z) Build FHIR IG from /scratch/repo (00:00.038 / 00:00.039, 97Mb) API keys loaded from /etc/fhir-settings.json (00:00.003 / 00:00.042, 97Mb) Package Cache: /var/lib/.fhir/packages (00:00.005 / 00:00.047, 97Mb) Found dependency on hl7.fhir.us.core#5.0.1 in Sushi config. Pre-installing (00:00.005 / 00:00.053, 97Mb) Installing hl7.fhir.us.core#5.0.1 to the package cache  Fetching:  Installing hl7.fhir.us.core#5.0.1  done. Found dependency on hl7.fhir.us.odh#1.2.0 in Sushi config. Pre-installing (00:05.386 / 00:05.439, 89Mb) Installing hl7.fhir.us.odh#1.2.0 to the package cache  Fetching:  Installing hl7.fhir.us.odh#1.2.0  done. Found dependency on hl7.terminology#5.1.0 in Sushi config. Pre-installing (00:00.741 / 00:06.181, 97Mb) Installing hl7.terminology#5.1.0 to the package cache  Fetching:  Installing hl7.terminology#5.1.0  done. Run Sushi on /scratch/repo (00:02.059 / 00:08.240, 225Mb) Sushi: info Running SUSHI v3.16.5 (implements FHIR Shorthand specification v3.0.0) (00:00.833 / 00:09.074, 233Mb) Sushi: info Arguments: (00:00.000 / 00:09.074, 233Mb) Sushi: info --require-latest (00:00.000 / 00:09.075, 233Mb) Sushi: info --out /scratch/repo (00:00.000 / 00:09.075, 233Mb) Sushi: info /scratch/repo (00:00.000 / 00:09.075, 233Mb) Sushi: info Using configuration file: /scratch/repo/sushi-config.yaml (00:00.834 / 00:09.910, 233Mb) Sushi: info Importing FSH text... (00:00.180 / 00:10.090, 233Mb) Sushi: info Preprocessed 6 documents with 7 aliases. (00:00.391 / 00:10.481, 233Mb) Sushi: info Imported 13 definitions and 6 instances. (00:00.032 / 00:10.514, 233Mb) Sushi: info Loaded virtual package sushi-r5forR4#1.0.0 with 7 resources (00:00.201 / 00:10.715, 233Mb) Sushi: info Resolved hl7.fhir.uv.tools.r4#latest to concrete version 0.8.0 (00:00.623 / 00:11.338, 233Mb) Sushi: info Attempting to download hl7.fhir.uv.tools.r4#0.8.0 from https://packages.fhir.org/hl7.fhir.uv.tools.r4/0.8.0 (00:00.001 / 00:11.340, 233Mb) Sushi: info Downloaded hl7.fhir.uv.tools.r4#0.8.0 (00:00.808 / 00:12.148, 233Mb) Sushi: info Cached hl7.fhir.uv.tools.r4#0.8.0 to /home/fhiruser/.fhir/packages/hl7.fhir.uv.tools.r4#0.8.0 (00:00.004 / 00:12.152, 233Mb) Sushi: info Loaded hl7.fhir.uv.tools.r4#0.8.0 with 110 resources (00:00.099 / 00:12.252, 233Mb) Sushi: info Resolved hl7.fhir.uv.extensions.r4#latest to concrete version 5.2.0 (00:00.434 / 00:12.686, 233Mb) Sushi: info Attempting to download hl7.fhir.uv.extensions.r4#5.2.0 from https://packages.fhir.org/hl7.fhir.uv.extensions.r4/5.2.0 (00:00.000 / 00:12.686, 233Mb) Sushi: info Downloaded hl7.fhir.uv.extensions.r4#5.2.0 (00:01.874 / 00:14.561, 233Mb) Sushi: info Cached hl7.fhir.uv.extensions.r4#5.2.0 to /home/fhiruser/.fhir/packages/hl7.fhir.uv.extensions.r4#5.2.0 (00:00.003 / 00:14.564, 233Mb) Sushi: info Loaded hl7.fhir.uv.extensions.r4#5.2.0 with 759 resources (00:00.468 / 00:15.032, 233Mb) Sushi: info Loaded hl7.fhir.us.core#5.0.1 with 194 resources (00:00.157 / 00:15.189, 233Mb) Sushi: info Loaded hl7.fhir.us.odh#1.2.0 with 22 resources (00:00.038 / 00:15.227, 233Mb) Sushi: info Loaded hl7.terminology#5.1.0 with 4216 resources (00:01.727 / 00:16.955, 233Mb) Sushi: info Attempting to download hl7.fhir.r4.core#4.0.1 from https://packages.fhir.org/hl7.fhir.r4.core/4.0.1 (00:00.000 / 00:16.956, 233Mb) Sushi: info Downloaded hl7.fhir.r4.core#4.0.1 (00:04.074 / 00:21.030, 233Mb) Sushi: info Cached hl7.fhir.r4.core#4.0.1 to /home/fhiruser/.fhir/packages/hl7.fhir.r4.core#4.0.1 (00:00.002 / 00:21.032, 233Mb) Sushi: info Loaded hl7.fhir.r4.core#4.0.1 with 4581 resources (00:01.621 / 00:22.654, 233Mb) Sushi: info Loaded virtual package sushi-local#LOCAL with 0 resources (00:00.014 / 00:22.668, 233Mb) Sushi: info Converting FSH to FHIR resources... (00:00.029 / 00:22.698, 233Mb) Sushi: info Converted 5 FHIR StructureDefinitions. (00:00.947 / 00:23.645, 233Mb) Sushi: info Converted 1 FHIR CodeSystems. (00:00.029 / 00:23.675, 233Mb) Sushi: info Converted 7 FHIR ValueSets. (00:00.180 / 00:23.855, 233Mb) Sushi: info Converted 6 FHIR instances. (00:01.385 / 00:25.241, 233Mb) Sushi: info Exporting FHIR resources as JSON... (00:00.001 / 00:25.242, 233Mb) Sushi: info Exported 19 FHIR resources as JSON. (00:00.048 / 00:25.290, 233Mb) Sushi: info Assembling Implementation Guide sources... (00:00.002 / 00:25.293, 233Mb) Sushi: info Generated ImplementationGuide-hl7.fhir.us.military-service.json (00:00.055 / 00:25.349, 233Mb) Sushi: info Assembled Implementation Guide sources; ready for IG Publisher. (00:00.000 / 00:25.349, 233Mb) Sushi: ========================= SUSHI RESULTS =========================== (00:00.002 / 00:25.351, 233Mb) Sushi: | ------------------------------------------------------------- | (00:00.000 / 00:25.352, 233Mb) Sushi: | | Profiles | Extensions | Logicals | Resources | | (00:00.000 / 00:25.352, 233Mb) Sushi: | |-------------------------------------------------------------| | (00:00.000 / 00:25.352, 233Mb) Sushi: | | 4 | 1 | 0 | 0 | | (00:00.000 / 00:25.352, 233Mb) Sushi: | ------------------------------------------------------------- | (00:00.000 / 00:25.352, 233Mb) Sushi: | ------------------------------------------------------------- | (00:00.000 / 00:25.353, 233Mb) Sushi: | | ValueSets | CodeSystems | Instances | | (00:00.000 / 00:25.353, 233Mb) Sushi: | |-------------------------------------------------------------| | (00:00.000 / 00:25.353, 233Mb) Sushi: | | 7 | 1 | 6 | | (00:00.000 / 00:25.353, 233Mb) Sushi: | ------------------------------------------------------------- | (00:00.000 / 00:25.353, 233Mb) Sushi: | | (00:00.000 / 00:25.354, 233Mb) Sushi: =================================================================== (00:00.000 / 00:25.354, 233Mb) Sushi: | You rock, lobster! 0 Errors 0 Warnings | (00:00.000 / 00:25.354, 233Mb) Sushi: =================================================================== (00:00.000 / 00:25.354, 233Mb) Root directory: /scratch/repo (00:00.026 / 00:25.380, 233Mb) Unable to load IG as an r5 IG - try R4 (property code is a class com.google.gson.JsonPrimitive looking for an object) (00:00.835 / 00:26.216, 56Mb) Load Template from hl7.fhir.template (00:00.729 / 00:26.946, 57Mb) Installing hl7.fhir.template#1.0.0 to the package cache  Fetching:  Installing hl7.fhir.template#1.0.0  done.  Load Template from hl7.base.template#1.0.0 (00:00.517 / 00:27.463, 65Mb) Installing hl7.base.template#1.0.0 to the package cache  Fetching:  Installing hl7.base.template#1.0.0  done.  Load Template from fhir.base.template#1.0.0 (00:00.399 / 00:27.862, 73Mb) Installing fhir.base.template#1.0.0 to the package cache  Fetching:  Installing fhir.base.template#1.0.0  done. Terminology Cache is at /scratch/repo/input-cache/txcache. Trimming now (00:05.889 / 00:33.752, 361Mb) Core Package hl7.fhir.r4.core#4.0.1 (00:00.000 / 00:33.752, 361Mb) Running Terminology Log: /tmp/ohfu-fhir-ig-12029970655475847358.html Connect to Terminology Server at http://tx.fhir.org (00:45.381 / 01:19.134, 350Mb) Installing hl7.fhir.pubpack#0.2.3 to the package cache  Fetching:  Installing hl7.fhir.pubpack#0.2.3  done. Load Package hl7.fhir.pubpack#0.2.3 Installing hl7.fhir.xver-extensions#0.1.0 to the package cache  Fetching:  Installing hl7.fhir.xver-extensions#0.1.0  done. Load Package hl7.fhir.xver-extensions#0.1.0 Load Package hl7.fhir.uv.extensions.r4#5.2.0 Installing hl7.terminology.r4#3.1.0 to the package cache  Fetching:  Installing hl7.terminology.r4#3.1.0  done. Load Package hl7.terminology.r4#3.1.0 Installing hl7.fhir.uv.bulkdata#2.0.0 to the package cache  Fetching:  Installing hl7.fhir.uv.bulkdata#2.0.0  done. Load Package hl7.fhir.uv.bulkdata#2.0.0 Installing hl7.fhir.uv.smart-app-launch#2.0.0 to the package cache  Fetching:  Installing hl7.fhir.uv.smart-app-launch#2.0.0  done. Load Package hl7.fhir.uv.smart-app-launch#2.0.0 Installing us.nlm.vsac#0.7.0 to the package cache  Fetching:  Installing us.nlm.vsac#0.7.0  done. Load Package us.nlm.vsac#0.7.0 Installing hl7.fhir.uv.sdc#3.0.0 to the package cache  Fetching:  Installing hl7.fhir.uv.sdc#3.0.0  done. Ignore Dependency on Core FHIR hl7.fhir.r4.examples#4.0.1, from package 'hl7.fhir.uv.sdc#3.0.0' (02:26.960 / 03:46.095, 1Gb) Load Package hl7.fhir.uv.sdc#3.0.0 Load Package hl7.fhir.us.core#5.0.1 Installing hl7.fhir.us.core#3.1.1 to the package cache  Fetching:  Installing hl7.fhir.us.core#3.1.1  done. Load Package hl7.fhir.us.core#3.1.1 Installing us.cdc.phinvads#0.12.0 to the package cache  Fetching:  Installing us.cdc.phinvads#0.12.0  done. Load Package us.cdc.phinvads#0.12.0 Load Package hl7.fhir.us.odh#1.2.0 Load Package hl7.terminology#5.1.0 Load Package hl7.fhir.uv.tools.r4#0.8.0 Load R5 Specials Installing hl7.fhir.r5.core#5.0.0 to the package cache  Fetching:  Installing hl7.fhir.r5.core#5.0.0  done. Initialization complete (00:27.827 / 04:13.922, 1Gb) Load IG (00:00.000 / 04:13.923, 1Gb) Load Content (00:00.000 / 04:13.923, 1Gb) Using en-US as the default narrative language. (no language information in Implementation Guide) (00:00.103 / 04:14.027, 1Gb) Process Loaded Resources (00:00.989 / 04:15.016, 1Gb) Generating Snapshots (00:00.439 / 04:15.455, 470Mb) Signing Certificate: RSA key for Subject: OU=IG Publisher, L=Ann Arbor, CN=hl7.org, O=HL7, ST=Missouri, C=us from: OU=IG Publisher, L=Ann Arbor, CN=hl7.org, O=HL7, ST=Missouri, C=us Fetch http://hl7.org/fhir/us/military-service/package-list.json for version check (00:00.887 / 04:16.342, 646Mb) Processing Conformance Resources (00:00.103 / 04:16.446, 646Mb) Checking Language (00:00.000 / 04:16.446, 646Mb) Load Dependency Info (00:00.001 / 04:16.447, 646Mb) Load Info (00:00.001 / 04:16.448, 646Mb) Load Paths (00:00.000 / 04:16.448, 650Mb) Check R4 / R4B (00:00.000 / 04:16.449, 650Mb) Assign Comparison Ids (00:00.044 / 04:16.493, 650Mb) Propagating status (00:00.000 / 04:16.493, 650Mb) Generating Narratives (00:00.000 / 04:16.494, 650Mb) Validating Conformance Resources (00:02.395 / 04:18.889, 524Mb) Check profiles & code systems (00:14.680 / 04:33.569, 1Gb) Check realm rules (00:00.003 / 04:33.573, 1Gb) Installing hl7.fhir.us.core#8.0.0 to the package cache  Fetching:  Installing hl7.fhir.us.core#8.0.0  done. US Core Comparisons Finished Previous Version Comparison (00:15.463 / 04:49.037, 2Gb) Checking for Bundles to sign (00:00.023 / 04:49.060, 2Gb) Validating Resources (00:00.000 / 04:49.060, 2Gb) Processing Provenance Records (00:01.976 / 04:51.036, 3Gb) Generating Outputs in /scratch/repo/output (00:00.000 / 04:51.036, 3Gb) Generate Native Outputs (00:00.322 / 04:51.359, 3Gb) Run Template (00:04.665 / 04:56.025, 3Gb) Generate HTML Outputs (00:03.019 / 04:59.044, 791Mb) Generate Spreadsheets (00:11.548 / 05:10.593, 2Gb) Generate Summaries (00:02.826 / 05:13.419, 3Gb) Generating Summary Outputs (00:00.000 / 05:13.419, 3Gb) DB Cumulative Time invested: 00:00:03.340 Sending Usage Stats to Server (00:14.851 / 05:28.271, 5Gb) ## Memory (MB): Use = 5919, Free = 13088, Total = 19008, Max = 19008 (00:00.010 / 05:28.282, 5Gb) Reclaiming memory... (00:00.001 / 05:28.283, 5Gb) ## Memory (MB): Use = 666, Free = 18341, Total = 19008, Max = 19008 (00:01.099 / 05:29.383, 674Mb) Run jekyll: jekyll build --destination "/scratch/repo/output" (in folder /scratch/repo/temp/pages) (00:00.002 / 05:29.385, 674Mb) Troubleshooting Note: usual cases for Jekyll to fail are: (00:00.000 / 05:29.385, 674Mb) * A failure to produce a fragment that is already logged in the output above (00:00.000 / 05:29.385, 674Mb) * A reference to a manually edited file that hasn't been provided (00:00.000 / 05:29.385, 674Mb) Jekyll: Source: /scratch/repo/temp/pages (00:00.589 / 05:29.974, 714Mb) Jekyll: Generating... (00:00.000 / 05:29.974, 714Mb) Jekyll: done in 1.759 seconds. (00:01.758 / 05:31.733, 714Mb) Checking Output HTML (00:02.106 / 05:33.840, 1Gb) found 842 files (00:00.005 / 05:33.846, 1Gb) ........................................ ........................................ ... 842 html files, 0 pages invalid xhtml (0%) (00:19.025 / 05:52.871, 4Gb) ... 92028 links, 0 broken links (0%) (00:00.000 / 05:52.871, 4Gb) Generate fragment-usage-analysis.csv (00:00.000 / 05:52.871, 4Gb) Build final .zip (00:00.010 / 05:52.882, 4Gb) Final .zip built (00:04.171 / 05:57.054, 4Gb) Installing hl7.fhir.r4.examples#4.0.1 to the package cache  Fetching:  Installing hl7.fhir.r4.examples#4.0.1  done. Built. Times: loading: 00:02.522, generate: 02:32.891, narrative generation: 00:02.394, realm-rules: 00:15.464, previous-version: 00:00.000, jekyll: 00:02.362, validation: 00:16.644 (#20), template: 00:03.029 (#3) (00:52.283 / 06:49.338, 6Gb) Generating QA (00:00.000 / 06:49.338, 6Gb) Validation output in /scratch/repo/output/qa.html Errors: 16, Warnings: 36, Info: 16, Broken Links: 0 (00:00.414 / 06:49.753, 6Gb) Finished @ 10/6/25, 1:20 PM. Max Memory Used = 6Gb (00:00.031 / 06:49.784, 6Gb)