INFO:root:about to clone! DEBUG:root:running: git clone --recursive https://github.com/HL7/fhir-icsr-ae-reporting --branch main repo DEBUG:root:Time to deadline 35879.998042 seconds Cloning into 'repo'... DEBUG:root:running: wget -q https://github.com/HL7/fhir-ig-publisher/releases/latest/download/publisher.jar -O publisher.jar DEBUG:root:Time to deadline 35879.480104 seconds DEBUG:root:running: npm -g install fsh-sushi DEBUG:root:Time to deadline 35878.460982 seconds npm WARN deprecated rimraf@2.6.3: Rimraf versions prior to v4 are no longer supported npm WARN deprecated inflight@1.0.6: This module is not supported, and leaks memory. Do not use it. Check out lru-cache if you want a good and tested way to coalesce async requests by a key value, which is much more comprehensive and powerful. npm WARN deprecated glob@7.2.3: Glob versions prior to v9 are no longer supported added 140 packages in 6s 15 packages are looking for funding run `npm fund` for details npm notice npm notice New major version of npm available! 9.8.1 -> 11.6.0 npm notice Changelog: npm notice Run `npm install -g npm@11.6.0` to update! npm notice DEBUG:root:running: java -Xms19000m -Xmx19000m -jar ../publisher.jar -ig ig.json -api-key-file /etc/ig.builder.keyfile.ini -fhir-settings /etc/fhir-settings.json -auto-ig-build -tx http://tx.fhir.org -target https://build.fhir.org/ig/HL7/fhir-icsr-ae-reporting/ -out /scratch/repo DEBUG:root:Time to deadline 35871.913523 seconds FHIR IG Publisher Version 2.0.17 (Git# 98facbadd305). Built 2025-09-09T06:53:45.198Z (7 days old) Detected Java version: 21-ea from /usr/local/openjdk-21 on Linux/amd64 (64bit). 19008MB available dir = /scratch/repo, path = /usr/local/openjdk-21/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin Parameters: -ig ig.json -api-key-file /etc/ig.builder.keyfile.ini -fhir-settings /etc/fhir-settings.json -auto-ig-build -tx http://tx.fhir.org -target https://build.fhir.org/ig/HL7/fhir-icsr-ae-reporting/ -out /scratch/repo Character encoding = UTF-8 / UTF-8 Start Clock @ Tuesday, September 16, 2025, 1:56:34 PM Coordinated Universal Time (2025-09-16T13:56:34Z) Build FHIR IG from /scratch/repo (00:00.026 / 00:00.026, 97Mb) API keys loaded from /etc/fhir-settings.json (00:00.002 / 00:00.029, 97Mb) Package Cache: /var/lib/.fhir/packages (00:00.003 / 00:00.032, 97Mb) Found dependency on hl7.fhir.us.core#4.0.0 in Sushi config. Pre-installing (00:00.004 / 00:00.037, 97Mb) Installing hl7.fhir.us.core#4.0.0 to the package cache  Fetching:  Installing hl7.fhir.us.core#4.0.0  done. Found dependency on hl7.fhir.us.medmorph#0.1.0 in Sushi config. Pre-installing (00:02.930 / 00:02.967, 80Mb) Installing hl7.fhir.us.medmorph#0.1.0 to the package cache  Fetching:  Installing hl7.fhir.us.medmorph#0.1.0  done. Found dependency on us.nlm.vsac#0.9.0 in Sushi config. Pre-installing (00:00.699 / 00:03.667, 88Mb) Installing us.nlm.vsac#0.9.0 to the package cache  Fetching:  Installing us.nlm.vsac#0.9.0  done. Run Sushi on /scratch/repo (01:13.808 / 01:17.475, 283Mb) Sushi: info Running SUSHI v3.16.4 (implements FHIR Shorthand specification v3.0.0) (00:00.713 / 01:18.189, 292Mb) Sushi: info Arguments: (00:00.000 / 01:18.190, 292Mb) Sushi: info --require-latest (00:00.000 / 01:18.190, 292Mb) Sushi: info --out /scratch/repo (00:00.000 / 01:18.190, 292Mb) Sushi: info /scratch/repo (00:00.000 / 01:18.191, 292Mb) Sushi: info Using configuration file: /scratch/repo/sushi-config.yaml (00:00.925 / 01:19.117, 292Mb) Sushi: info Importing FSH text... (00:00.141 / 01:19.258, 292Mb) Sushi: info Preprocessed 16 documents with 49 aliases. (00:00.403 / 01:19.662, 292Mb) Sushi: info Imported 57 definitions and 42 instances. (00:00.053 / 01:19.715, 292Mb) Sushi: info Loaded virtual package sushi-r5forR4#1.0.0 with 7 resources (00:00.182 / 01:19.898, 292Mb) Sushi: info Resolved hl7.fhir.uv.tools.r4#latest to concrete version 0.8.0 (00:00.609 / 01:20.507, 292Mb) Sushi: info Attempting to download hl7.fhir.uv.tools.r4#0.8.0 from https://packages.fhir.org/hl7.fhir.uv.tools.r4/0.8.0 (00:00.000 / 01:20.508, 292Mb) Sushi: info Downloaded hl7.fhir.uv.tools.r4#0.8.0 (00:01.146 / 01:21.655, 292Mb) Sushi: info Cached hl7.fhir.uv.tools.r4#0.8.0 to /home/fhiruser/.fhir/packages/hl7.fhir.uv.tools.r4#0.8.0 (00:00.002 / 01:21.658, 292Mb) Sushi: info Loaded hl7.fhir.uv.tools.r4#0.8.0 with 110 resources (00:00.081 / 01:21.739, 292Mb) Sushi: info Resolved hl7.terminology.r4#latest to concrete version 6.5.0 (00:00.517 / 01:22.257, 292Mb) Sushi: info Attempting to download hl7.terminology.r4#6.5.0 from https://packages.fhir.org/hl7.terminology.r4/6.5.0 (00:00.000 / 01:22.257, 292Mb) Sushi: info Downloaded hl7.terminology.r4#6.5.0 (00:02.620 / 01:24.878, 292Mb) Sushi: info Cached hl7.terminology.r4#6.5.0 to /home/fhiruser/.fhir/packages/hl7.terminology.r4#6.5.0 (00:00.001 / 01:24.879, 292Mb) Sushi: info Loaded hl7.terminology.r4#6.5.0 with 4392 resources (00:01.723 / 01:26.603, 292Mb) Sushi: info Resolved hl7.fhir.uv.extensions.r4#latest to concrete version 5.2.0 (00:00.573 / 01:27.176, 292Mb) Sushi: info Attempting to download hl7.fhir.uv.extensions.r4#5.2.0 from https://packages.fhir.org/hl7.fhir.uv.extensions.r4/5.2.0 (00:00.000 / 01:27.177, 292Mb) Sushi: info Downloaded hl7.fhir.uv.extensions.r4#5.2.0 (00:01.506 / 01:28.683, 292Mb) Sushi: info Cached hl7.fhir.uv.extensions.r4#5.2.0 to /home/fhiruser/.fhir/packages/hl7.fhir.uv.extensions.r4#5.2.0 (00:00.001 / 01:28.684, 292Mb) Sushi: info Loaded hl7.fhir.uv.extensions.r4#5.2.0 with 759 resources (00:00.317 / 01:29.002, 292Mb) Sushi: info Loaded hl7.fhir.us.core#4.0.0 with 148 resources (00:00.093 / 01:29.096, 292Mb) Sushi: info Loaded hl7.fhir.us.medmorph#0.1.0 with 40 resources (00:00.021 / 01:29.117, 292Mb) Sushi: info Loaded us.nlm.vsac#0.9.0 with 13259 resources (00:05.489 / 01:34.606, 292Mb) Sushi: info Attempting to download hl7.fhir.r4.core#4.0.1 from https://packages.fhir.org/hl7.fhir.r4.core/4.0.1 (00:00.001 / 01:34.607, 292Mb) Sushi: info Downloaded hl7.fhir.r4.core#4.0.1 (00:03.232 / 01:37.840, 292Mb) Sushi: info Cached hl7.fhir.r4.core#4.0.1 to /home/fhiruser/.fhir/packages/hl7.fhir.r4.core#4.0.1 (00:00.001 / 01:37.842, 292Mb) Sushi: info Loaded hl7.fhir.r4.core#4.0.1 with 4581 resources (00:01.521 / 01:39.363, 292Mb) Sushi: info Loaded virtual package sushi-local#LOCAL with 0 resources (00:00.018 / 01:39.382, 292Mb) Sushi: info Converting FSH to FHIR resources... (00:00.046 / 01:39.428, 292Mb) Sushi: info Converted 42 FHIR StructureDefinitions. (00:02.819 / 01:42.247, 292Mb) Sushi: info Converted 2 FHIR CodeSystems. (00:00.035 / 01:42.282, 292Mb) Sushi: info Converted 13 FHIR ValueSets. (00:00.483 / 01:42.765, 292Mb) Sushi: info Converted 42 FHIR instances. (00:04.794 / 01:47.560, 292Mb) Sushi: info Exporting FHIR resources as JSON... (00:00.000 / 01:47.560, 292Mb) Sushi: info Exported 99 FHIR resources as JSON. (00:00.175 / 01:47.736, 292Mb) Sushi: info Assembling Implementation Guide sources... (00:00.004 / 01:47.740, 292Mb) Sushi: info Generated ImplementationGuide-hl7.fhir.us.icsr-ae-reporting.json (00:00.051 / 01:47.792, 292Mb) Sushi: info Assembled Implementation Guide sources; ready for IG Publisher. (00:00.000 / 01:47.792, 292Mb) Sushi: ========================= SUSHI RESULTS =========================== (00:00.001 / 01:47.793, 292Mb) Sushi: | ------------------------------------------------------------- | (00:00.000 / 01:47.793, 292Mb) Sushi: | | Profiles | Extensions | Logicals | Resources | | (00:00.000 / 01:47.794, 292Mb) Sushi: | |-------------------------------------------------------------| | (00:00.000 / 01:47.794, 292Mb) Sushi: | | 22 | 20 | 0 | 0 | | (00:00.000 / 01:47.794, 292Mb) Sushi: | ------------------------------------------------------------- | (00:00.000 / 01:47.794, 292Mb) Sushi: | ------------------------------------------------------------- | (00:00.000 / 01:47.794, 292Mb) Sushi: | | ValueSets | CodeSystems | Instances | | (00:00.000 / 01:47.795, 292Mb) Sushi: | |-------------------------------------------------------------| | (00:00.000 / 01:47.795, 292Mb) Sushi: | | 13 | 2 | 42 | | (00:00.000 / 01:47.795, 292Mb) Sushi: | ------------------------------------------------------------- | (00:00.000 / 01:47.795, 292Mb) Sushi: | | (00:00.000 / 01:47.795, 292Mb) Sushi: =================================================================== (00:00.000 / 01:47.796, 292Mb) Sushi: | Swish! Nothing but fishnet. 0 Errors 0 Warnings | (00:00.000 / 01:47.796, 292Mb) Sushi: =================================================================== (00:00.000 / 01:47.796, 292Mb) Root directory: /scratch/repo (00:00.027 / 01:47.824, 292Mb) Unable to load IG as an r5 IG - try R4 (property code is a class com.google.gson.JsonPrimitive looking for an object) (00:00.677 / 01:48.501, 57Mb) Load Template from hl7.fhir.template#current (00:00.634 / 01:49.136, 57Mb) Installing hl7.fhir.template#current to the package cache  Fetching:  Installing hl7.fhir.template#current  done.  Load Template from hl7.base.template#current (00:00.638 / 01:49.773, 97Mb) Installing hl7.base.template#current to the package cache  Fetching:  Installing hl7.base.template#current  done.  Load Template from fhir.base.template#current (00:00.173 / 01:49.947, 97Mb) Installing fhir.base.template#current to the package cache  Fetching:  Installing fhir.base.template#current  done. Terminology Cache is at /scratch/repo/input-cache/txcache. Trimming now (00:04.217 / 01:54.164, 393Mb) Core Package hl7.fhir.r4.core#4.0.1 (00:00.000 / 01:54.165, 393Mb) Running Terminology Log: /tmp/ohfu-fhir-ig-8551724820585362711.html Connect to Terminology Server at http://tx.fhir.org (00:26.944 / 02:21.110, 605Mb) Installing hl7.fhir.pubpack#0.2.3 to the package cache  Fetching:  Installing hl7.fhir.pubpack#0.2.3  done. Load Package hl7.fhir.pubpack#0.2.3 Installing hl7.fhir.xver-extensions#0.1.0 to the package cache  Fetching:  Installing hl7.fhir.xver-extensions#0.1.0  done. Load Package hl7.fhir.xver-extensions#0.1.0 Load Package hl7.terminology.r4#6.5.0 Load Package hl7.fhir.uv.extensions.r4#5.2.0 Installing hl7.fhir.uv.bulkdata#1.0.1 to the package cache  Fetching:  Installing hl7.fhir.uv.bulkdata#1.0.1  done. Load Package hl7.fhir.uv.bulkdata#1.0.1 Installing us.nlm.vsac#0.3.0 to the package cache  Fetching:  Installing us.nlm.vsac#0.3.0  done. Load Package us.nlm.vsac#0.3.0 Load Package hl7.fhir.us.core#4.0.0 Installing hl7.fhir.us.core#3.1.0 to the package cache  Fetching:  Installing hl7.fhir.us.core#3.1.0  done. Load Package hl7.fhir.us.core#3.1.0 Load Package hl7.fhir.us.medmorph#0.1.0 Load Package us.nlm.vsac#0.9.0 Load Package hl7.fhir.uv.tools.r4#0.8.0 Load R5 Specials Installing hl7.fhir.r5.core#5.0.0 to the package cache  Fetching:  Installing hl7.fhir.r5.core#5.0.0  done. Initialization complete (01:00.286 / 03:21.396, 1Gb) Load IG (00:00.001 / 03:21.397, 1Gb) Load Content (00:00.001 / 03:21.398, 1Gb) Using en-US as the default narrative language. (no language information in Implementation Guide) (00:00.151 / 03:21.550, 1Gb) Process Loaded Resources (00:01.391 / 03:22.941, 433Mb) Generating Snapshots (00:01.048 / 03:23.990, 697Mb) The slice definition for MessageHeader.extension has a minimum of 0 but the slices add up to a minimum of 1 Signing Certificate: RSA key for Subject: OU=IG Publisher, L=Ann Arbor, CN=hl7.org, O=HL7, ST=Missouri, C=us from: OU=IG Publisher, L=Ann Arbor, CN=hl7.org, O=HL7, ST=Missouri, C=us Fetch http://hl7.org/fhir/us/icsr-ae-reporting/package-list.json for version check (00:02.598 / 03:26.588, 897Mb) Processing Conformance Resources (00:00.139 / 03:26.728, 897Mb) Checking Language (00:00.000 / 03:26.728, 897Mb) Load Dependency Info (00:00.003 / 03:26.731, 897Mb) Load Info (00:00.002 / 03:26.734, 901Mb) Load Paths (00:00.001 / 03:26.735, 901Mb) Check R4 / R4B (00:00.000 / 03:26.736, 901Mb) Assign Comparison Ids (00:00.059 / 03:26.796, 913Mb) Propagating status (00:00.000 / 03:26.796, 913Mb) Generating Narratives (00:00.000 / 03:26.796, 913Mb) Validating Conformance Resources (02:07.627 / 05:34.424, 1Gb) Publishing Content Failed: Invalid candidate version: null (00:05.689 / 05:40.113, 978Mb) (00:00.000 / 05:40.113, 978Mb) Use -? to get command line help (00:00.000 / 05:40.113, 978Mb) (00:00.000 / 05:40.113, 978Mb) Stack Dump (for debugging): (00:00.000 / 05:40.113, 978Mb) org.hl7.fhir.exceptions.FHIRException: Invalid candidate version: null at org.hl7.fhir.utilities.VersionUtilities.checkVersionNotNullAndValid(VersionUtilities.java:1169) at org.hl7.fhir.utilities.VersionUtilities.isThisOrLater(VersionUtilities.java:534) at org.hl7.fhir.validation.instance.type.ValueSetValidator.validateValueSetInclude(ValueSetValidator.java:458) at org.hl7.fhir.validation.instance.type.ValueSetValidator.validateValueSetCompose(ValueSetValidator.java:289) at org.hl7.fhir.validation.instance.type.ValueSetValidator.validateValueSet(ValueSetValidator.java:243) at org.hl7.fhir.validation.instance.InstanceValidator.checkSpecials(InstanceValidator.java:6513) at org.hl7.fhir.validation.instance.InstanceValidator.startInner(InstanceValidator.java:6443) at org.hl7.fhir.validation.instance.InstanceValidator.start(InstanceValidator.java:6188) at org.hl7.fhir.validation.instance.InstanceValidator.validateResource(InstanceValidator.java:8247) at org.hl7.fhir.validation.instance.InstanceValidator.validate(InstanceValidator.java:955) at org.hl7.fhir.igtools.publisher.PublisherProcessor.validate(PublisherProcessor.java:546) at org.hl7.fhir.igtools.publisher.PublisherProcessor.validate(PublisherProcessor.java:1728) at org.hl7.fhir.igtools.publisher.PublisherProcessor.validate(PublisherProcessor.java:1953) at org.hl7.fhir.igtools.publisher.PublisherProcessor.loadConformance2(PublisherProcessor.java:99) at org.hl7.fhir.igtools.publisher.Publisher.createIg(Publisher.java:366) at org.hl7.fhir.igtools.publisher.Publisher.execute(Publisher.java:218) at org.hl7.fhir.igtools.publisher.Publisher.main(Publisher.java:1482)