INFO:root:about to clone! DEBUG:root:running: git clone --recursive https://github.com/HL7/fhir-directory-query --branch master repo Cloning into 'repo'... DEBUG:root:Time to deadline 35879.994893 seconds DEBUG:root:running: wget -q https://github.com/HL7/fhir-ig-publisher/releases/latest/download/publisher.jar -O publisher.jar DEBUG:root:Time to deadline 35853.690834 seconds DEBUG:root:running: npm -g install fsh-sushi DEBUG:root:Time to deadline 35851.365674 seconds /usr/local/bin/sushi -> /usr/local/lib/node_modules/fsh-sushi/dist/app.js > es5-ext@0.10.61 postinstall /usr/local/lib/node_modules/fsh-sushi/node_modules/es5-ext > node -e "try{require('./_postinstall')}catch(e){}" || exit 0 npm WARN optional SKIPPING OPTIONAL DEPENDENCY: fsevents@2.3.2 (node_modules/fsh-sushi/node_modules/fsevents): npm WARN notsup SKIPPING OPTIONAL DEPENDENCY: Unsupported platform for fsevents@2.3.2: wanted {"os":"darwin","arch":"any"} (current: {"os":"linux","arch":"x64"}) + fsh-sushi@2.7.1 added 952 packages from 491 contributors in 15.262s DEBUG:root:running: java -Xms19000m -Xmx19000m -jar ../publisher.jar -ig ig.json -api-key-file /etc/ig.builder.keyfile.ini -auto-ig-build -tx http://tx.fhir.org/r4 -target https://build.fhir.org/ig/HL7/fhir-directory-query/ -out /scratch/ig-build-temp-HKJF3Q/repo DEBUG:root:Time to deadline 35835.590999 seconds FHIR IG Publisher Version 1.2.22 (Git# d7844d47a7d3). Built 2022-12-01T16:58:05.142Z (7 days old) Detected Java version: 11.0.9 from /usr/local/openjdk-11 on Linux/amd64 (64bit). 18366MB available dir = /scratch/ig-build-temp-HKJF3Q/repo, path = /usr/local/rvm/bin:/usr/local/rvm/rubies/ruby-2.5.1/bin:/usr/local/openjdk-11/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin Parameters: -ig ig.json -api-key-file /etc/ig.builder.keyfile.ini -auto-ig-build -tx http://tx.fhir.org/r4 -target https://build.fhir.org/ig/HL7/fhir-directory-query/ -out /scratch/ig-build-temp-HKJF3Q/repo Start Clock @ Thursday, December 8, 2022 at 10:59:12 PM Coordinated Universal Time (2022-12-08T22:59:12Z) Build FHIR IG from /scratch/ig-build-temp-HKJF3Q/repo (00:00.007) API keys loaded from /etc/ig.builder.keyfile.ini (00:00.008) Package Cache: var/lib/.fhir/packages (00:00.012) Run Sushi on /scratch/ig-build-temp-HKJF3Q/repo (00:00.013) Sushi: info Running SUSHI v2.7.1 (implements FHIR Shorthand specification v2.0.0) (00:00.541) Sushi: info Arguments: (00:00.541) Sushi: info --out /scratch/ig-build-temp-HKJF3Q/repo (00:00.542) Sushi: info /scratch/ig-build-temp-HKJF3Q/repo (00:00.542) Sushi: info Using configuration file: /scratch/ig-build-temp-HKJF3Q/repo/sushi-config.yaml (00:01.567) Sushi: info Importing FSH text... (00:01.580) Sushi: info Preprocessed 18 documents with 55 aliases. (00:02.063) Sushi: info Imported 92 definitions and 130 instances. (00:02.186) Sushi: info Checking local cache for hl7.fhir.us.core#4.0.0... (00:02.188) Sushi: info Did not find hl7.fhir.us.core#4.0.0 in local cache. (00:02.189) Sushi: info Downloading hl7.fhir.us.core#4.0.0... (00:02.189) Sushi: info Checking local cache for hl7.fhir.r4.core#4.0.1... (00:02.208) Sushi: info Did not find hl7.fhir.r4.core#4.0.1 in local cache. (00:02.209) Sushi: info Downloading hl7.fhir.r4.core#4.0.1... (00:02.209) Sushi: info Downloaded hl7.fhir.us.core#4.0.0 (00:03.564) Sushi: info Loaded package hl7.fhir.us.core#4.0.0 (00:03.769) Sushi: info Downloaded hl7.fhir.r4.core#4.0.1 (00:05.106) Sushi: info Loaded package hl7.fhir.r4.core#4.0.1 (00:06.897) Sushi: info Converting FSH to FHIR resources... (00:06.997) Sushi: info Converted 39 FHIR StructureDefinitions. (00:09.492) Sushi: info Converted 22 FHIR CodeSystems. (00:09.835) Sushi: info Converted 31 FHIR ValueSets. (00:10.056) Sushi: info Converted 130 FHIR instances. (00:18.092) Sushi: info Exporting FHIR resources as JSON... (00:18.093) Sushi: info Exported 222 FHIR resources as JSON. (00:18.225) Sushi: info Assembling Implementation Guide sources... (00:18.226) Sushi: info Generated ImplementationGuide-hl7.fhir.us.directory-query.json (00:18.243) Sushi: info Assembled Implementation Guide sources; ready for IG Publisher. (00:18.243) Sushi: (00:18.244) Sushi: ========================= SUSHI RESULTS =========================== (00:18.245) Sushi: | ------------------------------------------------------------- | (00:18.246) Sushi: | | Profiles | Extensions | Logicals | Resources | | (00:18.246) Sushi: | |-------------------------------------------------------------| | (00:18.246) Sushi: | | 12 | 27 | 0 | 0 | | (00:18.246) Sushi: | ------------------------------------------------------------- | (00:18.246) Sushi: | ------------------------------------------------------------- | (00:18.247) Sushi: | | ValueSets | CodeSystems | Instances | | (00:18.247) Sushi: | |-------------------------------------------------------------| | (00:18.247) Sushi: | | 31 | 22 | 130 | | (00:18.247) Sushi: | ------------------------------------------------------------- | (00:18.248) Sushi: | | (00:18.248) Sushi: =================================================================== (00:18.248) Sushi: | Well hooked and landed! 0 Errors 0 Warnings | (00:18.248) Sushi: =================================================================== (00:18.248) Sushi: (00:18.249) Unable to load IG as an r5 IG - try R4 (property code is a class com.google.gson.JsonPrimitive looking for an object) (00:19.102) Load Template from hl7.fhir.template#current (00:19.908) Installing hl7.fhir.template#current to the package cache Fetching: Installing: done. Load Template from hl7.base.template#current (00:20.459) Installing hl7.base.template#current to the package cache Fetching: Installing: done. Load Template from fhir.base.template#current (00:20.481) Installing fhir.base.template#current to the package cache Fetching: .. Installing: .. done. onLoad.findSpreadsheets: onLoad.updateIg: [xslt] Processing /scratch/ig-build-temp-HKJF3Q/repo/template/onLoad-ig-working.xml to /scratch/ig-build-temp-HKJF3Q/repo/template/onLoad-ig-updated.xml [xslt] Loading stylesheet /scratch/ig-build-temp-HKJF3Q/repo/template/scripts/onLoad.xslt onLoad.extend: onLoad: Root directory: /scratch/ig-build-temp-HKJF3Q/repo (00:24.406) Core Package hl7.fhir.r4.core#4.0.1 Installing hl7.fhir.r4.core#4.0.1 to the package cache Fetching: .................................................................................................... Installing: .................................................................................................... done. .:Terminology Cache is at /scratch/ig-build-temp-HKJF3Q/repo/input-cache/txcache. Trimming now (00:37.467) Connect to Terminology Server at http://tx.fhir.org/r4 (00:37.470) Installing hl7.fhir.pubpack#0.1.4 to the package cache Fetching: .......... Installing: .......... done. Load Package hl7.fhir.pubpack#0.1.4 Installing hl7.fhir.xver-extensions#0.0.11 to the package cache Fetching: Installing: done. Load Package hl7.fhir.xver-extensions#0.0.11 Installing hl7.terminology.r4#5.0.0 to the package cache Fetching: .................................................................................... Installing: .................................................................................... done. Load Package hl7.terminology.r4#5.0.0 Installing hl7.fhir.us.core#4.0.0 to the package cache Fetching: ..... Installing: ..... done. Installing hl7.fhir.uv.bulkdata#1.0.1 to the package cache Fetching: Installing: done. Load Package hl7.fhir.uv.bulkdata#1.0.1 Installing us.nlm.vsac#0.3.0 to the package cache Fetching: ............................................................................................................ ...................................................................... Installing: ........................................................................................................................ .......................................................... done. Load Package us.nlm.vsac#0.3.0 Load Package hl7.fhir.us.core#4.0.0 Installing hl7.fhir.uv.tools#current to the package cache Fetching: . Installing: . done. Load Package hl7.fhir.uv.tools#0.1.0 Load R5 ExtensionsInstalling hl7.fhir.r5.core#current to the package cache Fetching: ................................................................................................ Installing: ................................................................................................ done. - 128 resources (01:18.358) Initialization complete (01:18.457) Load Content (01:18.460) loadPrePages from FetchedFile[/scratch/ig-build-temp-HKJF3Q/repo/fsh-generated/includes] as /scratch/ig-build-temp-HKJF3Q/repo/fsh-generated/includes loadPrePages from FetchedFile[/scratch/ig-build-temp-HKJF3Q/repo/input/pagecontent] as /scratch/ig-build-temp-HKJF3Q/repo/input/pagecontent Processing Conformance Resources (01:20.549) Generating Snapshots (01:21.554) ..........Propagating status (01:23.231) Generating Narratives (01:23.231) ......Validating Conformance Resources (01:30.870) Installing hl7.fhir.us.core#current to the package cache Fetching: ......... Installing: ......... done. US Core Comparison: compare StructureDefinition[http://hl7.org/fhir/us/directory-query/StructureDefinition/NatlDirEndpointQry-CareTeam|1.0.0-ballot] to StructureDefinition[http://hl7.org/fhir/us/core/StructureDefinition/us-core-careteam|6.0.0-ballot] US Core Comparison: compare StructureDefinition[http://hl7.org/fhir/us/directory-query/StructureDefinition/NatlDirEndpointQry-PractitionerRole|1.0.0-ballot] to StructureDefinition[http://hl7.org/fhir/us/core/StructureDefinition/us-core-practitionerrole|6.0.0-ballot] US Core Comparisons Finished Validating Resources (02:09.084) Processing Provenance Records (02:20.108) Generating Outputs in /scratch/ig-build-temp-HKJF3Q/repo/output (02:20.108) Run Template (02:24.513) onGenerate.checkVersions: [xslt] Processing /scratch/ig-build-temp-HKJF3Q/repo/template/onGenerate-ig-working.xml to /scratch/ig-build-temp-HKJF3Q/repo/template/versions.txt [xslt] Loading stylesheet /scratch/ig-build-temp-HKJF3Q/repo/template/scripts/onGenerate.getVersions.xslt [mkdir] Created dir: /scratch/ig-build-temp-HKJF3Q/repo/input-cache/schemas onGenerate.r5-schemas: [mkdir] Created dir: /scratch/ig-build-temp-HKJF3Q/repo/input-cache/schemas/R5 [get] Getting: http://build.fhir.org/fhir-single.xsd [get] To: /scratch/ig-build-temp-HKJF3Q/repo/input-cache/schemas/R5/fhir-single.xsd [get] Getting: http://build.fhir.org/fhir-xhtml.xsd [get] To: /scratch/ig-build-temp-HKJF3Q/repo/input-cache/schemas/R5/fhir-xhtml.xsd [get] Getting: http://build.fhir.org/xml.xsd [get] To: /scratch/ig-build-temp-HKJF3Q/repo/input-cache/schemas/R5/xml.xsd [get] Getting: http://build.fhir.org/xmldsig-core-schema.xsd [get] To: /scratch/ig-build-temp-HKJF3Q/repo/input-cache/schemas/R5/xmldsig-core-schema.xsd onGenerate.r4-schemas: [mkdir] Created dir: /scratch/ig-build-temp-HKJF3Q/repo/input-cache/schemas/R4 [get] Getting: http://hl7.org/fhir/R4/fhir-single.xsd [get] To: /scratch/ig-build-temp-HKJF3Q/repo/input-cache/schemas/R4/fhir-single.xsd [get] Getting: http://hl7.org/fhir/R4/fhir-xhtml.xsd [get] To: /scratch/ig-build-temp-HKJF3Q/repo/input-cache/schemas/R4/fhir-xhtml.xsd [get] Getting: http://hl7.org/fhir/R4/xml.xsd [get] To: /scratch/ig-build-temp-HKJF3Q/repo/input-cache/schemas/R4/xml.xsd [get] Getting: http://hl7.org/fhir/R4/xmldsig-core-schema.xsd [get] To: /scratch/ig-build-temp-HKJF3Q/repo/input-cache/schemas/R4/xmldsig-core-schema.xsd onGenerate.r3-schemas: onGenerate.r2b-schemas: onGenerate.r2-schemas: onGenerate.schemas: onGenerate.data: [xslt] Processing /scratch/ig-build-temp-HKJF3Q/repo/template/onGenerate-ig-working.xml to /scratch/ig-build-temp-HKJF3Q/repo/temp/pages/_data/artifacts.json [xslt] Loading stylesheet /scratch/ig-build-temp-HKJF3Q/repo/template/scripts/onGenerate.data.xslt onGenerate.setup: onGenerate.infoFile: [xslt] Processing /scratch/ig-build-temp-HKJF3Q/repo/template/onGenerate-ig-working.xml to /scratch/ig-build-temp-HKJF3Q/repo/temp/pages/_data/info.json [xslt] Loading stylesheet /scratch/ig-build-temp-HKJF3Q/repo/template/scripts/onGenerate.genJson.xslt onGenerate.processIncludes: [copy] Copying 17 files to /scratch/ig-build-temp-HKJF3Q/repo/temp/pages/_includes onGenerate.processIg: [xslt] Processing /scratch/ig-build-temp-HKJF3Q/repo/template/onGenerate-ig-working.xml to /scratch/ig-build-temp-HKJF3Q/repo/template/onGenerate-ig-working.1.xml [xslt] Loading stylesheet /scratch/ig-build-temp-HKJF3Q/repo/template/scripts/onGenerate.group.xslt [xslt] Processing /scratch/ig-build-temp-HKJF3Q/repo/template/onGenerate-ig-working.1.xml to /scratch/ig-build-temp-HKJF3Q/repo/template/onGenerate-ig-updated.xml [xslt] Loading stylesheet /scratch/ig-build-temp-HKJF3Q/repo/template/scripts/onGenerate.final.xslt onGenerate.igQa: [xslt] Processing /scratch/ig-build-temp-HKJF3Q/repo/template/onGenerate-ig-updated.xml to /scratch/ig-build-temp-HKJF3Q/repo/template/ongenerate-validation-igqa.json [xslt] Loading stylesheet /scratch/ig-build-temp-HKJF3Q/repo/template/scripts/onGenerate.qa.xslt onGenerate.artifactList: [xslt] Processing /scratch/ig-build-temp-HKJF3Q/repo/template/onGenerate-ig-updated.xml to /scratch/ig-build-temp-HKJF3Q/repo/temp/pages/_includes/artifacts.xml [xslt] Loading stylesheet /scratch/ig-build-temp-HKJF3Q/repo/template/scripts/createArtifactSummary.xslt check-plantumlfiles: onGenerate.plantUml.ig: onGenerate.plantUml.template: onGenerate.plantUml: onGenerate.copyDataFiles: onGenerate.jira.setup: [xslt] Processing /scratch/ig-build-temp-HKJF3Q/repo/template/onGenerate-ig-updated.xml to /scratch/ig-build-temp-HKJF3Q/repo/template/properties.txt [xslt] Loading stylesheet /scratch/ig-build-temp-HKJF3Q/repo/template/scripts/onGenerate.genProperties.xslt [get] Getting: https://github.com/HL7/JIRA-Spec-Artifacts/raw/master/xml/_workgroups.xml [get] To: /scratch/ig-build-temp-HKJF3Q/repo/input-cache/workgroups.xml [get] https://github.com/HL7/JIRA-Spec-Artifacts/raw/master/xml/_workgroups.xml moved to https://raw.githubusercontent.com/HL7/JIRA-Spec-Artifacts/master/xml/_workgroups.xml [get] Getting: https://github.com/HL7/JIRA-Spec-Artifacts/raw/master/xml/FHIR-us-directory-query.xml [get] To: /scratch/ig-build-temp-HKJF3Q/repo/input-cache/jiraspec.xml [get] https://github.com/HL7/JIRA-Spec-Artifacts/raw/master/xml/FHIR-us-directory-query.xml moved to https://raw.githubusercontent.com/HL7/JIRA-Spec-Artifacts/master/xml/FHIR-us-directory-query.xml onGenerate.jira.packagelistcopy: [copy] Copying 1 file to /scratch/ig-build-temp-HKJF3Q/repo/template onGenerate.jira.packagelistget: onGenerate.jira.packagelistProcess: [xslt] Processing /scratch/ig-build-temp-HKJF3Q/repo/template/onGenerate.jira.package-list.tmp.xml to /scratch/ig-build-temp-HKJF3Q/repo/template/onGenerate.jira.package-list.xml [xslt] Loading stylesheet /scratch/ig-build-temp-HKJF3Q/repo/template/scripts/onGenerate.package-list.xslt onGenerate.jira.packagelistSkip: onGenerate.jira.pubrequestProcess: onGenerate.jira.pubrequestSkip: onGenerate.jira.generate: [xslt] Processing /scratch/ig-build-temp-HKJF3Q/repo/template/onGenerate.jira.tmp.xml to /scratch/ig-build-temp-HKJF3Q/repo/template/onGenerate.jira.tmp2.xml [xslt] Loading stylesheet /scratch/ig-build-temp-HKJF3Q/repo/template/scripts/onGenerate.process-pkg-list.xslt [xslt] Processing /scratch/ig-build-temp-HKJF3Q/repo/template/onGenerate.jira.tmp2.xml to /scratch/ig-build-temp-HKJF3Q/repo/template/onGenerate.jira.xml [xslt] Loading stylesheet /scratch/ig-build-temp-HKJF3Q/repo/template/scripts/onGenerate.jira.xslt [xslt] Processing /scratch/ig-build-temp-HKJF3Q/repo/template/onGenerate.jira.xml to /scratch/ig-build-temp-HKJF3Q/repo/template/jira-new.xml [xslt] Loading stylesheet /scratch/ig-build-temp-HKJF3Q/repo/template/scripts/onGenerate.normalize.xslt [xslt] Processing /scratch/ig-build-temp-HKJF3Q/repo/input-cache/jiraspec.xml to /scratch/ig-build-temp-HKJF3Q/repo/template/jira-current.xml [xslt] Loading stylesheet /scratch/ig-build-temp-HKJF3Q/repo/template/scripts/onGenerate.normalize.xslt [copy] Copying 1 file to /scratch/ig-build-temp-HKJF3Q/repo onGenerate.jira.check: onGenerate.jira.skip-offline: onGenerate.jira.skip-missing: onGenerate.jira: onGenerate.extend: onGenerate: Template Done (02:27.275) Generating Summary Outputs (03:26.803) Sending Usage Stats to Server (05:38.750) ## Memory (MB): Use = 5151, Free = 13214, Total = 18366, Max =18366 Reclaiming memory... ## Memory (MB): Use = 2236, Free = 16130, Total = 18366, Max =18366 Run jekyll: jekyll build --destination "/scratch/ig-build-temp-HKJF3Q/repo/output" (in folder /scratch/ig-build-temp-HKJF3Q/repo/temp/pages) (05:45.195) Jekyll: Source: /scratch/ig-build-temp-HKJF3Q/repo/temp/pages (05:45.965) Jekyll: Generating... (05:45.966) Jekyll: done in 7.632 seconds. (05:53.597) Checking Output HTML (05:58.241) found 2768 files (05:58.259) ........................................ ........................................ ... 2768 html files, 0 pages invalid xhtml (0%) (06:24.490) ... 348189 links, 0 broken links (0%) (06:24.490) Build final .zip (06:24.490) Final .zip built (06:28.199) Built. Times: loading: 00:02.089, generate: 05:09.107, narrative generation: 00:07.638, realm-rules: 00:04.898, previous-version: 00:00.000, jekyll: 00:08.471, validation: 00:43.285 (#223), template: 00:02.761 (#3) (06:29.955) Validation output in /scratch/ig-build-temp-HKJF3Q/repo/output/qa.html Errors: 211, Warnings: 10, Info: 0, Broken Links: 0 (06:31.145) Finished (06:31.145) Done (06:31.145)