INFO:root:about to clone! DEBUG:root:running: git clone --recursive https://github.com/HL7/dicom-sr --branch main repo DEBUG:root:Time to deadline 35879.998076 seconds Cloning into 'repo'... DEBUG:root:running: wget -q https://github.com/HL7/fhir-ig-publisher/releases/latest/download/publisher.jar -O publisher.jar DEBUG:root:Time to deadline 35879.380399 seconds DEBUG:root:running: npm -g install fsh-sushi DEBUG:root:Time to deadline 35878.361086 seconds npm WARN deprecated inflight@1.0.6: This module is not supported, and leaks memory. Do not use it. Check out lru-cache if you want a good and tested way to coalesce async requests by a key value, which is much more comprehensive and powerful. npm WARN deprecated rimraf@2.6.3: Rimraf versions prior to v4 are no longer supported npm WARN deprecated glob@7.2.3: Glob versions prior to v9 are no longer supported added 139 packages in 8s 14 packages are looking for funding run `npm fund` for details npm notice npm notice New major version of npm available! 9.8.1 -> 11.6.2 npm notice Changelog: npm notice Run `npm install -g npm@11.6.2` to update! npm notice DEBUG:root:running: java -Xms19000m -Xmx19000m -jar ../publisher.jar -ig ig.json -api-key-file /etc/ig.builder.keyfile.ini -fhir-settings /etc/fhir-settings.json -auto-ig-build -tx http://tx.fhir.org -target https://build.fhir.org/ig/HL7/dicom-sr/ -out /scratch/repo DEBUG:root:Time to deadline 35870.35995 seconds FHIR IG Publisher Version 2.0.24 (Git# f67b3ab6b4f9). Built 2025-10-28T17:45:50.25Z (20 hours old) Detected Java version: 21-ea from /usr/local/openjdk-21 on Linux/amd64 (64bit). 19008MB available dir = /scratch/repo, path = /usr/local/openjdk-21/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin Parameters: -ig ig.json -api-key-file /etc/ig.builder.keyfile.ini -fhir-settings /etc/fhir-settings.json -auto-ig-build -tx http://tx.fhir.org -target https://build.fhir.org/ig/HL7/dicom-sr/ -out /scratch/repo Character encoding = UTF-8 / UTF-8 Start Clock @ Wednesday, October 29, 2025, 1:52:03 PM Coordinated Universal Time (2025-10-29T13:52:03Z) Build FHIR IG from /scratch/repo (00:00.028 / 00:00.028, 97Mb) API keys loaded from /etc/fhir-settings.json (00:00.002 / 00:00.031, 97Mb) Package Cache: /var/lib/.fhir/packages (00:00.003 / 00:00.034, 97Mb) Found dependency on fhir.dicom#2025.2.20250411 in Sushi config. Pre-installing (00:00.004 / 00:00.038, 97Mb) Installing fhir.dicom#2025.2.20250411 to the package cache  Fetching:  Installing fhir.dicom#2025.2.20250411  done. Run Sushi on /scratch/repo (00:07.749 / 00:07.788, 152Mb) Sushi: info Running SUSHI v3.16.5 (implements FHIR Shorthand specification v3.0.0) (00:00.726 / 00:08.515, 161Mb) Sushi: info Arguments: (00:00.000 / 00:08.515, 161Mb) Sushi: info --require-latest (00:00.000 / 00:08.515, 161Mb) Sushi: info --out /scratch/repo (00:00.000 / 00:08.515, 161Mb) Sushi: info /scratch/repo (00:00.000 / 00:08.516, 161Mb) Sushi: info Using configuration file: /scratch/repo/sushi-config.yaml (00:00.718 / 00:09.234, 161Mb) Sushi: info Importing FSH text... (00:00.156 / 00:09.391, 161Mb) Sushi: info Preprocessed 33 documents with 5 aliases. (00:00.481 / 00:09.873, 161Mb) Sushi: info Imported 23 definitions and 34 instances. (00:00.046 / 00:09.920, 161Mb) Sushi: info Resolved hl7.fhir.uv.tools.r5#latest to concrete version 0.8.0 (00:00.775 / 00:10.695, 161Mb) Sushi: info Attempting to download hl7.fhir.uv.tools.r5#0.8.0 from https://packages.fhir.org/hl7.fhir.uv.tools.r5/0.8.0 (00:00.001 / 00:10.697, 161Mb) Sushi: info Downloaded hl7.fhir.uv.tools.r5#0.8.0 (00:00.949 / 00:11.646, 161Mb) Sushi: info Cached hl7.fhir.uv.tools.r5#0.8.0 to /home/fhiruser/.fhir/packages/hl7.fhir.uv.tools.r5#0.8.0 (00:00.003 / 00:11.649, 161Mb) Sushi: info Loaded hl7.fhir.uv.tools.r5#0.8.0 with 107 resources (00:00.089 / 00:11.739, 161Mb) Sushi: info Resolved hl7.terminology.r5#latest to concrete version 6.5.0 (00:00.450 / 00:12.189, 161Mb) Sushi: info Attempting to download hl7.terminology.r5#6.5.0 from https://packages.fhir.org/hl7.terminology.r5/6.5.0 (00:00.000 / 00:12.190, 161Mb) Sushi: info Downloaded hl7.terminology.r5#6.5.0 (00:02.879 / 00:15.069, 161Mb) Sushi: info Cached hl7.terminology.r5#6.5.0 to /home/fhiruser/.fhir/packages/hl7.terminology.r5#6.5.0 (00:00.001 / 00:15.071, 161Mb) Sushi: info Loaded hl7.terminology.r5#6.5.0 with 4392 resources (00:01.838 / 00:16.909, 161Mb) Sushi: info Resolved hl7.fhir.uv.extensions.r5#latest to concrete version 5.2.0 (00:00.446 / 00:17.356, 161Mb) Sushi: info Attempting to download hl7.fhir.uv.extensions.r5#5.2.0 from https://packages.fhir.org/hl7.fhir.uv.extensions.r5/5.2.0 (00:00.000 / 00:17.356, 161Mb) Sushi: info Downloaded hl7.fhir.uv.extensions.r5#5.2.0 (00:01.485 / 00:18.842, 161Mb) Sushi: info Cached hl7.fhir.uv.extensions.r5#5.2.0 to /home/fhiruser/.fhir/packages/hl7.fhir.uv.extensions.r5#5.2.0 (00:00.001 / 00:18.843, 161Mb) Sushi: info Loaded hl7.fhir.uv.extensions.r5#5.2.0 with 759 resources (00:00.339 / 00:19.183, 161Mb) Sushi: info Loaded fhir.dicom#2025.2.20250411 with 1398 resources (00:00.488 / 00:19.672, 161Mb) Sushi: info Attempting to download hl7.fhir.r5.core#5.0.0 from https://packages.fhir.org/hl7.fhir.r5.core/5.0.0 (00:00.000 / 00:19.672, 161Mb) Sushi: info Downloaded hl7.fhir.r5.core#5.0.0 (00:03.907 / 00:23.579, 161Mb) Sushi: info Cached hl7.fhir.r5.core#5.0.0 to /home/fhiruser/.fhir/packages/hl7.fhir.r5.core#5.0.0 (00:00.001 / 00:23.580, 161Mb) Sushi: info Loaded hl7.fhir.r5.core#5.0.0 with 2968 resources (00:01.452 / 00:25.033, 161Mb) Sushi: info Loaded virtual package sushi-local#LOCAL with 0 resources (00:00.017 / 00:25.051, 161Mb) Sushi: info Converting FSH to FHIR resources... (00:00.028 / 00:25.079, 161Mb) Sushi: info Converted 21 FHIR StructureDefinitions. (00:03.905 / 00:28.984, 161Mb) Sushi: info Converted 2 FHIR CodeSystems. (00:00.201 / 00:29.185, 161Mb) Sushi: info Converted 34 FHIR instances. (00:05.395 / 00:34.581, 161Mb) Sushi: info Exporting FHIR resources as JSON... (00:00.321 / 00:34.902, 161Mb) Sushi: info Exported 57 FHIR resources as JSON. (00:00.224 / 00:35.126, 161Mb) Sushi: info Assembling Implementation Guide sources... (00:00.003 / 00:35.129, 161Mb) Sushi: info Generated ImplementationGuide-hl7.fhir.uv.dicom-sr.json (00:00.079 / 00:35.209, 161Mb) Sushi: info Assembled Implementation Guide sources; ready for IG Publisher. (00:00.000 / 00:35.209, 161Mb) Sushi: ========================= SUSHI RESULTS =========================== (00:00.001 / 00:35.211, 161Mb) Sushi: | ------------------------------------------------------------- | (00:00.000 / 00:35.211, 161Mb) Sushi: | | Profiles | Extensions | Logicals | Resources | | (00:00.000 / 00:35.211, 161Mb) Sushi: | |-------------------------------------------------------------| | (00:00.000 / 00:35.212, 161Mb) Sushi: | | 21 | 0 | 0 | 0 | | (00:00.000 / 00:35.212, 161Mb) Sushi: | ------------------------------------------------------------- | (00:00.000 / 00:35.212, 161Mb) Sushi: | ------------------------------------------------------------- | (00:00.000 / 00:35.212, 161Mb) Sushi: | | ValueSets | CodeSystems | Instances | | (00:00.000 / 00:35.212, 161Mb) Sushi: | |-------------------------------------------------------------| | (00:00.000 / 00:35.213, 161Mb) Sushi: | | 0 | 2 | 34 | | (00:00.000 / 00:35.213, 161Mb) Sushi: | ------------------------------------------------------------- | (00:00.000 / 00:35.213, 161Mb) Sushi: | | (00:00.000 / 00:35.213, 161Mb) Sushi: =================================================================== (00:00.000 / 00:35.213, 161Mb) Sushi: | You're piranha roll now! 0 Errors 0 Warnings | (00:00.000 / 00:35.214, 161Mb) Sushi: =================================================================== (00:00.000 / 00:35.214, 161Mb) Root directory: /scratch/repo (00:00.034 / 00:35.248, 161Mb) Load Template from hl7.fhir.template#current (00:00.800 / 00:36.049, 56Mb) Installing hl7.fhir.template#current to the package cache  Fetching:  Installing hl7.fhir.template#current  done.  Load Template from hl7.base.template#current (00:00.672 / 00:36.721, 96Mb) Installing hl7.base.template#current to the package cache  Fetching:  Installing hl7.base.template#current  done.  Load Template from fhir2.base.template#current (00:00.136 / 00:36.857, 96Mb) Installing fhir2.base.template#current to the package cache  Fetching:  Installing fhir2.base.template#current  done. Scanning directory: /scratch/repo/template ====================================================================== Terminology Cache is at /scratch/repo/input-cache/txcache. Trimming now (00:05.445 / 00:42.303, 188Mb) Core Package hl7.fhir.r5.core#5.0.0 (00:00.000 / 00:42.304, 188Mb) Running Terminology Log: /tmp/ohfu-fhir-ig-12947804386817756370.html Connect to Terminology Server at http://tx.fhir.org (00:08.512 / 00:50.816, 367Mb) Installing hl7.fhir.pubpack#0.2.3 to the package cache  Fetching:  Installing hl7.fhir.pubpack#0.2.3  done. Load Package hl7.fhir.pubpack#0.2.3 Installing hl7.fhir.xver-extensions#0.1.0 to the package cache  Fetching:  Installing hl7.fhir.xver-extensions#0.1.0  done. Load Package hl7.fhir.xver-extensions#0.1.0 Load Package hl7.terminology.r5#6.5.0 Load Package hl7.fhir.uv.extensions.r5#5.2.0 Version mismatch. This IG is version 5.0.0, while the IG 'fhir.dicom' is from version 4.0.1 (will try to run anyway) (00:23.061 / 01:13.877, 607Mb) Ignore Dependency on Core FHIR hl7.fhir.r4.core#4.0.1, from package 'fhir.dicom#2025.2.20250411' (00:00.000 / 01:13.878, 607Mb) Load Package fhir.dicom#2025.2.20250411 Load Package hl7.fhir.uv.tools.r5#0.8.0 Initialization complete (00:02.582 / 01:16.460, 1Gb) Load IG (00:00.000 / 01:16.460, 1Gb) Load Translations (00:00.004 / 01:16.464, 1Gb) Load Content (00:00.000 / 01:16.465, 1Gb) Using en as the default narrative language. (Implementation Guide param i18n-default-lang) (00:00.075 / 01:16.540, 1Gb) Process Loaded Resources (00:01.298 / 01:17.839, 1Gb) Generating Snapshots (00:00.253 / 01:18.092, 1Gb) Signing Certificate: RSA key for Subject: OU=IG Publisher, L=Ann Arbor, CN=hl7.org, O=HL7, ST=Missouri, C=us from: OU=IG Publisher, L=Ann Arbor, CN=hl7.org, O=HL7, ST=Missouri, C=us Fetch http://hl7.org/fhir/uv/dicom-sr/package-list.json for version check (00:01.876 / 01:19.968, 1Gb) Checking Language (00:00.188 / 01:20.156, 1Gb) Load Dependency Info (00:00.003 / 01:20.159, 1Gb) Load Info (00:00.001 / 01:20.161, 1Gb) Load Paths (00:00.000 / 01:20.162, 1Gb) Check R4 / R4B (00:00.000 / 01:20.163, 1Gb) Assign Comparison Ids (00:00.039 / 01:20.202, 1Gb) Propagating status (00:00.000 / 01:20.202, 1Gb) Generating Narratives (00:00.125 / 01:20.328, 1Gb) Validating Conformance Resources (00:34.137 / 01:54.466, 1Gb) Check profiles & code systems (00:19.437 / 02:13.903, 1Gb) Check realm rules (00:00.004 / 02:13.908, 1Gb) Previous Version Comparison (00:00.000 / 02:13.908, 1Gb) Installing hl7.fhir.uv.dicom-sr#1.0.0-ballot to the package cache  Fetching:  Installing hl7.fhir.uv.dicom-sr#1.0.0-ballot  done. Installing hl7.terminology.r5#6.0.2 to the package cache  Fetching:  Installing hl7.terminology.r5#6.0.2  done. Installing hl7.fhir.uv.extensions.r5#5.1.0 to the package cache  Fetching:  Installing hl7.fhir.uv.extensions.r5#5.1.0  done. Installing fhir.dicom#2024.2.20240331 to the package cache  Fetching:  Installing fhir.dicom#2024.2.20240331  done. FHIR Version mismatch in package fhir.dicom#2024.2.20240331: version is 4.0.1 but must be 5.0.0 (path: hl7.fhir.uv.dicom-sr#1.0.0-ballot) Checking for Bundles to sign (00:21.720 / 02:35.629, 1Gb) Validating Resources (00:00.000 / 02:35.629, 1Gb) Processing Provenance Records (00:04.091 / 02:39.721, 1Gb) Generating Translation artifacts (00:00.000 / 02:39.721, 1Gb) Generating Outputs in /scratch/repo/output (00:00.002 / 02:39.723, 1Gb) Generate Native Outputs (00:00.361 / 02:40.084, 1Gb) Run Template (00:10.960 / 02:51.045, 3Gb) Generate HTML Outputs (00:05.716 / 02:56.761, 3Gb) Generate Spreadsheets (00:36.493 / 03:33.255, 1Gb) Generate Summaries (00:07.436 / 03:40.692, 4Gb) Generating Summary Outputs (en) (00:00.000 / 03:40.692, 4Gb) DB Cumulative Time invested: 00:00:00.821 Sending Usage Stats to Server (00:05.055 / 03:45.748, 5Gb) ## Memory (MB): Use = 5131, Free = 13876, Total = 19008, Max = 19008 (00:00.008 / 03:45.756, 5Gb) Reclaiming memory... (00:00.000 / 03:45.757, 5Gb) ## Memory (MB): Use = 995, Free = 18012, Total = 19008, Max = 19008 (00:01.319 / 03:47.077, 1003Mb) Run jekyll: jekyll build --destination "/scratch/repo/output" (in folder /scratch/repo/temp/pages) (00:00.002 / 03:47.079, 1012Mb) Troubleshooting Note: usual cases for Jekyll to fail are: (00:00.000 / 03:47.079, 1012Mb) * A failure to produce a fragment that is already logged in the output above (00:00.000 / 03:47.079, 1012Mb) * A reference to a manually edited file that hasn't been provided (00:00.000 / 03:47.079, 1012Mb) Jekyll: Source: /scratch/repo/temp/pages (00:00.564 / 03:47.643, 1020Mb) Jekyll: Generating... (00:00.000 / 03:47.644, 1020Mb) Jekyll: done in 5.463 seconds. (00:05.462 / 03:53.106, 1020Mb) Checking Output HTML (00:01.830 / 03:54.936, 1Gb) AI format for /scratch/repo/output/en - % reduction = 100 found 2580 files (00:03.110 / 03:58.046, 4Gb) ........................................ ........................................ ... 2580 html files, 0 pages invalid xhtml (0%) (00:49.201 / 04:47.248, 7Gb) ... 405920 links, 0 broken links (0%) (00:00.000 / 04:47.248, 7Gb) Generate fragment-usage-analysis.csv (00:00.000 / 04:47.248, 7Gb) Build final .zip (00:00.011 / 04:47.260, 7Gb) Final .zip built (00:05.211 / 04:52.472, 7Gb) Installing hl7.fhir.r4.core#4.0.1 to the package cache  Fetching:  Installing hl7.fhir.r4.core#4.0.1  done. Built. Times: loading: 00:03.692, generate: 03:54.322, propagating status: 00:00.125, narrative generation: 00:34.137, realm-rules: 00:00.000, previous-version: 00:21.658, jekyll: 00:06.065, validation: 00:23.460 (#58), template: 00:05.726 (#3) (00:22.007 / 05:14.479, 8Gb) Generating QA (00:00.000 / 05:14.479, 8Gb) Validation output in /scratch/repo/output/qa.html Errors: 8, Warnings: 137, Info: 18, Broken Links: 0 (00:00.504 / 05:14.984, 8Gb) Finished @ 10/29/25, 1:57 PM. Max Memory Used = 8Gb (00:00.041 / 05:15.026, 8Gb)