INFO:root:about to clone! DEBUG:root:running: git clone --recursive https://github.com/HL7/davinci-epdx --branch master repo DEBUG:root:Time to deadline 35879.99819 seconds Cloning into 'repo'... DEBUG:root:running: wget -q https://github.com/HL7/fhir-ig-publisher/releases/latest/download/publisher.jar -O publisher.jar DEBUG:root:Time to deadline 35856.488255 seconds DEBUG:root:running: npm -g install fsh-sushi DEBUG:root:Time to deadline 35855.0686 seconds npm WARN deprecated inflight@1.0.6: This module is not supported, and leaks memory. Do not use it. Check out lru-cache if you want a good and tested way to coalesce async requests by a key value, which is much more comprehensive and powerful. npm WARN deprecated glob@7.2.3: Glob versions prior to v9 are no longer supported npm WARN deprecated rimraf@2.6.3: Rimraf versions prior to v4 are no longer supported added 139 packages in 7s 14 packages are looking for funding run `npm fund` for details npm notice npm notice New major version of npm available! 9.8.1 -> 11.7.0 npm notice Changelog: npm notice Run `npm install -g npm@11.7.0` to update! npm notice DEBUG:root:running: java -Xms19000m -Xmx19000m -jar ../publisher.jar -ig ig.json -api-key-file /etc/ig.builder.keyfile.ini -fhir-settings /etc/fhir-settings.json -auto-ig-build -tx http://tx.fhir.org -target https://build.fhir.org/ig/HL7/davinci-epdx/ -out /scratch/repo DEBUG:root:Time to deadline 35848.119684 seconds FHIR IG Publisher Version 2.0.29 (Git# 826a7eb003d6). Built 2025-12-17T01:19:30.102Z (26 hours old) Detected Java version: 21-ea from /usr/local/openjdk-21 on Linux/amd64 (64bit). 19008MB available dir = /scratch/repo, path = /usr/local/openjdk-21/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin Parameters: -ig ig.json -api-key-file /etc/ig.builder.keyfile.ini -fhir-settings /etc/fhir-settings.json -auto-ig-build -tx http://tx.fhir.org -target https://build.fhir.org/ig/HL7/davinci-epdx/ -out /scratch/repo Character encoding = UTF-8 / UTF-8 Start Clock @ Thursday, December 18, 2025, 3:22:36 AM Coordinated Universal Time (2025-12-18T03:22:36Z) Build FHIR IG from /scratch/repo (00:00.027 / 00:00.027, 97Mb) API keys loaded from /etc/fhir-settings.json (00:00.002 / 00:00.030, 97Mb) Package Cache: /var/lib/.fhir/packages (00:00.003 / 00:00.033, 97Mb) Found dependency on hl7.fhir.us.core#7.0.0 in Sushi config. Pre-installing (00:00.010 / 00:00.043, 97Mb) Installing hl7.fhir.us.core#7.0.0 to the package cache  Fetching:  Installing hl7.fhir.us.core#7.0.0  done. Found dependency on hl7.fhir.us.core.v610#6.1.0 in Sushi config. Pre-installing (00:04.267 / 00:04.311, 89Mb) Installing hl7.fhir.us.core.v610#6.1.0 to the package cache  Fetching:  Installing hl7.fhir.us.core.v610#6.1.0  done. Found dependency on hl7.fhir.us.core.3.1.1#3.1.1 in Sushi config. Pre-installing (00:00.153 / 00:04.464, 89Mb) Installing hl7.fhir.us.core.3.1.1#3.1.1 to the package cache  Fetching:  Installing hl7.fhir.us.core.3.1.1#3.1.1  done. Run Sushi on /scratch/repo (00:00.169 / 00:04.634, 102Mb) Sushi: info Running SUSHI v3.16.5 (implements FHIR Shorthand specification v3.0.0) (00:00.735 / 00:05.370, 105Mb) Sushi: info Arguments: (00:00.000 / 00:05.370, 105Mb) Sushi: info --require-latest (00:00.000 / 00:05.371, 105Mb) Sushi: info --out /scratch/repo (00:00.000 / 00:05.371, 105Mb) Sushi: info /scratch/repo (00:00.000 / 00:05.372, 105Mb) Sushi: info Using configuration file: /scratch/repo/sushi-config.yaml (00:00.724 / 00:06.096, 105Mb) Sushi: info Importing FSH text... (00:00.173 / 00:06.270, 113Mb) Sushi: info Preprocessed 61 documents with 123 aliases. (00:01.288 / 00:07.559, 113Mb) Sushi: info Imported 88 definitions and 87 instances. (00:00.153 / 00:07.712, 113Mb) Sushi: info Loaded virtual package sushi-r5forR4#1.0.0 with 7 resources (00:00.161 / 00:07.874, 113Mb) Sushi: info Resolved hl7.fhir.uv.tools.r4#latest to concrete version 0.9.0 (00:00.641 / 00:08.516, 113Mb) Sushi: info Attempting to download hl7.fhir.uv.tools.r4#0.9.0 from https://packages.fhir.org/hl7.fhir.uv.tools.r4/0.9.0 (00:00.001 / 00:08.517, 113Mb) Sushi: info Downloaded hl7.fhir.uv.tools.r4#0.9.0 (00:00.800 / 00:09.318, 113Mb) Sushi: info Cached hl7.fhir.uv.tools.r4#0.9.0 to /home/fhiruser/.fhir/packages/hl7.fhir.uv.tools.r4#0.9.0 (00:00.002 / 00:09.321, 113Mb) Sushi: info Loaded hl7.fhir.uv.tools.r4#0.9.0 with 117 resources (00:00.085 / 00:09.406, 113Mb) Sushi: info Loaded hl7.fhir.us.core#7.0.0 with 211 resources (00:00.184 / 00:09.590, 113Mb) Sushi: info Loaded hl7.fhir.us.core.v610#6.1.0 with 0 resources (00:00.001 / 00:09.592, 113Mb) Sushi: info Loaded hl7.fhir.us.core.3.1.1#3.1.1 with 0 resources (00:00.001 / 00:09.593, 113Mb) Sushi: info Attempting to download hl7.fhir.us.davinci-hrex#1.1.0 from https://packages.fhir.org/hl7.fhir.us.davinci-hrex/1.1.0 (00:00.000 / 00:09.593, 113Mb) Sushi: info Downloaded hl7.fhir.us.davinci-hrex#1.1.0 (00:00.913 / 00:10.506, 113Mb) Sushi: info Cached hl7.fhir.us.davinci-hrex#1.1.0 to /home/fhiruser/.fhir/packages/hl7.fhir.us.davinci-hrex#1.1.0 (00:00.001 / 00:10.508, 113Mb) Sushi: info Loaded hl7.fhir.us.davinci-hrex#1.1.0 with 31 resources (00:00.032 / 00:10.541, 113Mb) Sushi: info Attempting to download hl7.fhir.us.carin-bb#2.1.0 from https://packages.fhir.org/hl7.fhir.us.carin-bb/2.1.0 (00:00.000 / 00:10.541, 113Mb) Sushi: info Downloaded hl7.fhir.us.carin-bb#2.1.0 (00:01.126 / 00:11.668, 113Mb) Sushi: info Cached hl7.fhir.us.carin-bb#2.1.0 to /home/fhiruser/.fhir/packages/hl7.fhir.us.carin-bb#2.1.0 (00:00.001 / 00:11.669, 113Mb) Sushi: info Loaded hl7.fhir.us.carin-bb#2.1.0 with 93 resources (00:00.128 / 00:11.797, 113Mb) Sushi: info Attempting to download hl7.fhir.us.davinci-crd#2.1.0 from https://packages.fhir.org/hl7.fhir.us.davinci-crd/2.1.0 (00:00.000 / 00:11.798, 113Mb) Sushi: info Downloaded hl7.fhir.us.davinci-crd#2.1.0 (00:00.990 / 00:12.788, 113Mb) Sushi: info Cached hl7.fhir.us.davinci-crd#2.1.0 to /home/fhiruser/.fhir/packages/hl7.fhir.us.davinci-crd#2.1.0 (00:00.001 / 00:12.790, 113Mb) Sushi: info Loaded hl7.fhir.us.davinci-crd#2.1.0 with 57 resources (00:00.041 / 00:12.831, 113Mb) Sushi: info Attempting to download hl7.fhir.us.davinci-pas#2.1.0 from https://packages.fhir.org/hl7.fhir.us.davinci-pas/2.1.0 (00:00.000 / 00:12.832, 113Mb) Sushi: info Downloaded hl7.fhir.us.davinci-pas#2.1.0 (00:01.138 / 00:13.970, 113Mb) Sushi: info Cached hl7.fhir.us.davinci-pas#2.1.0 to /home/fhiruser/.fhir/packages/hl7.fhir.us.davinci-pas#2.1.0 (00:00.002 / 00:13.973, 113Mb) Sushi: info Loaded hl7.fhir.us.davinci-pas#2.1.0 with 103 resources (00:00.089 / 00:14.063, 113Mb) Sushi: info Attempting to download hl7.fhir.us.davinci-atr#2.1.0 from https://packages.fhir.org/hl7.fhir.us.davinci-atr/2.1.0 (00:00.000 / 00:14.063, 113Mb) Sushi: info Downloaded hl7.fhir.us.davinci-atr#2.1.0 (00:00.812 / 00:14.876, 113Mb) Sushi: info Cached hl7.fhir.us.davinci-atr#2.1.0 to /home/fhiruser/.fhir/packages/hl7.fhir.us.davinci-atr#2.1.0 (00:00.001 / 00:14.877, 113Mb) Sushi: info Loaded hl7.fhir.us.davinci-atr#2.1.0 with 32 resources (00:00.023 / 00:14.900, 113Mb) Sushi: info Attempting to download hl7.fhir.us.davinci-pdex-plan-net#1.2.0 from https://packages.fhir.org/hl7.fhir.us.davinci-pdex-plan-net/1.2.0 (00:00.000 / 00:14.900, 113Mb) Sushi: info Downloaded hl7.fhir.us.davinci-pdex-plan-net#1.2.0 (00:00.931 / 00:15.832, 113Mb) Sushi: info Cached hl7.fhir.us.davinci-pdex-plan-net#1.2.0 to /home/fhiruser/.fhir/packages/hl7.fhir.us.davinci-pdex-plan-net#1.2.0 (00:00.000 / 00:15.833, 113Mb) Sushi: info Loaded hl7.fhir.us.davinci-pdex-plan-net#1.2.0 with 117 resources (00:00.066 / 00:15.900, 113Mb) Sushi: info Attempting to download hl7.fhir.us.ndh#1.0.0 from https://packages.fhir.org/hl7.fhir.us.ndh/1.0.0 (00:00.000 / 00:15.900, 113Mb) Sushi: info Downloaded hl7.fhir.us.ndh#1.0.0 (00:01.349 / 00:17.250, 113Mb) Sushi: info Cached hl7.fhir.us.ndh#1.0.0 to /home/fhiruser/.fhir/packages/hl7.fhir.us.ndh#1.0.0 (00:00.001 / 00:17.251, 113Mb) Sushi: info Loaded hl7.fhir.us.ndh#1.0.0 with 239 resources (00:00.164 / 00:17.415, 113Mb) Sushi: info Attempting to download hl7.fhir.us.davinci-dtr#2.1.0 from https://packages.fhir.org/hl7.fhir.us.davinci-dtr/2.1.0 (00:00.000 / 00:17.416, 113Mb) Sushi: info Downloaded hl7.fhir.us.davinci-dtr#2.1.0 (00:00.964 / 00:18.381, 113Mb) Sushi: info Cached hl7.fhir.us.davinci-dtr#2.1.0 to /home/fhiruser/.fhir/packages/hl7.fhir.us.davinci-dtr#2.1.0 (00:00.001 / 00:18.382, 113Mb) Sushi: info Loaded hl7.fhir.us.davinci-dtr#2.1.0 with 37 resources (00:00.028 / 00:18.410, 113Mb) Sushi: info Attempting to download hl7.fhir.uv.extensions.r4#5.2.0 from https://packages.fhir.org/hl7.fhir.uv.extensions.r4/5.2.0 (00:00.000 / 00:18.411, 113Mb) Sushi: info Downloaded hl7.fhir.uv.extensions.r4#5.2.0 (00:01.470 / 00:19.881, 113Mb) Sushi: info Cached hl7.fhir.uv.extensions.r4#5.2.0 to /home/fhiruser/.fhir/packages/hl7.fhir.uv.extensions.r4#5.2.0 (00:00.001 / 00:19.882, 113Mb) Sushi: info Loaded hl7.fhir.uv.extensions.r4#5.2.0 with 759 resources (00:00.362 / 00:20.245, 113Mb) Sushi: info Attempting to download hl7.terminology.r4#6.3.0 from https://packages.fhir.org/hl7.terminology.r4/6.3.0 (00:00.000 / 00:20.245, 113Mb) Sushi: info Downloaded hl7.terminology.r4#6.3.0 (00:02.742 / 00:22.987, 113Mb) Sushi: info Cached hl7.terminology.r4#6.3.0 to /home/fhiruser/.fhir/packages/hl7.terminology.r4#6.3.0 (00:00.001 / 00:22.989, 113Mb) Sushi: info Loaded hl7.terminology.r4#6.3.0 with 4374 resources (00:01.777 / 00:24.767, 113Mb) Sushi: info Attempting to download hl7.fhir.r4.core#4.0.1 from https://packages.fhir.org/hl7.fhir.r4.core/4.0.1 (00:00.000 / 00:24.767, 113Mb) Sushi: info Downloaded hl7.fhir.r4.core#4.0.1 (00:02.935 / 00:27.703, 113Mb) Sushi: info Cached hl7.fhir.r4.core#4.0.1 to /home/fhiruser/.fhir/packages/hl7.fhir.r4.core#4.0.1 (00:00.002 / 00:27.705, 113Mb) Sushi: info Loaded hl7.fhir.r4.core#4.0.1 with 4581 resources (00:01.673 / 00:29.379, 113Mb) Sushi: info Loaded virtual package sushi-local#LOCAL with 8 resources (00:00.021 / 00:29.401, 113Mb) Sushi: info Converting FSH to FHIR resources... (00:00.024 / 00:29.426, 113Mb) Sushi: info Converted 47 FHIR StructureDefinitions. (00:09.928 / 00:39.355, 113Mb) Sushi: info Converted 18 FHIR CodeSystems. (00:00.815 / 00:40.170, 113Mb) Sushi: info Converted 23 FHIR ValueSets. (00:01.096 / 00:41.266, 113Mb) Sushi: info Converted 87 FHIR instances. (00:34.183 / 01:15.450, 113Mb) Sushi: info Exporting FHIR resources as JSON... (00:00.001 / 01:15.451, 113Mb) Sushi: info Exported 163 FHIR resources as JSON. (00:00.223 / 01:15.674, 113Mb) Sushi: info Assembling Implementation Guide sources... (00:00.010 / 01:15.685, 113Mb) Sushi: info Generated ImplementationGuide-hl7.fhir.us.davinci-pdex.json (00:00.068 / 01:15.754, 113Mb) Sushi: info Assembled Implementation Guide sources; ready for IG Publisher. (00:00.000 / 01:15.754, 113Mb) Sushi: ========================= SUSHI RESULTS =========================== (00:00.001 / 01:15.756, 113Mb) Sushi: | ------------------------------------------------------------- | (00:00.000 / 01:15.756, 113Mb) Sushi: | | Profiles | Extensions | Logicals | Resources | | (00:00.000 / 01:15.756, 113Mb) Sushi: | |-------------------------------------------------------------| | (00:00.000 / 01:15.756, 113Mb) Sushi: | | 20 | 27 | 0 | 0 | | (00:00.000 / 01:15.756, 113Mb) Sushi: | ------------------------------------------------------------- | (00:00.000 / 01:15.756, 113Mb) Sushi: | ------------------------------------------------------------- | (00:00.000 / 01:15.757, 113Mb) Sushi: | | ValueSets | CodeSystems | Instances | | (00:00.000 / 01:15.757, 113Mb) Sushi: | |-------------------------------------------------------------| | (00:00.000 / 01:15.757, 113Mb) Sushi: | | 23 | 18 | 87 | | (00:00.000 / 01:15.758, 113Mb) Sushi: | ------------------------------------------------------------- | (00:00.000 / 01:15.758, 113Mb) Sushi: | | (00:00.000 / 01:15.758, 113Mb) Sushi: =================================================================== (00:00.000 / 01:15.758, 113Mb) Sushi: | Ac-clam-ations! 0 Errors 0 Warnings | (00:00.000 / 01:15.759, 113Mb) Sushi: =================================================================== (00:00.000 / 01:15.759, 113Mb) Root directory: /scratch/repo (00:00.034 / 01:15.794, 113Mb) Unable to load IG as an r5 IG - try R4 (property code is a class com.google.gson.JsonPrimitive looking for an object) (00:00.794 / 01:16.588, 57Mb) Load Template from hl7.davinci.template#1.0.0 (00:00.831 / 01:17.420, 57Mb) Installing hl7.davinci.template#1.0.0 to the package cache  Fetching:  Installing hl7.davinci.template#1.0.0  done.  Load Template from hl7.fhir.template#1.0.0 (00:00.628 / 01:18.048, 81Mb) Installing hl7.fhir.template#1.0.0 to the package cache  Fetching:  Installing hl7.fhir.template#1.0.0  done.  Load Template from hl7.base.template#1.0.0 (00:00.271 / 01:18.320, 89Mb) Installing hl7.base.template#1.0.0 to the package cache  Fetching:  Installing hl7.base.template#1.0.0  done.  Load Template from fhir.base.template#1.0.0 (00:00.269 / 01:18.590, 89Mb) Installing fhir.base.template#1.0.0 to the package cache  Fetching:  Installing fhir.base.template#1.0.0  done. Scanning directory: /scratch/repo/template ====================================================================== Terminology Cache is at /scratch/repo/input-cache/txcache. Trimming now (00:05.649 / 01:24.240, 401Mb) Core Package hl7.fhir.r4.core#4.0.1 (00:00.000 / 01:24.240, 401Mb) Running Terminology Log: /tmp/ohfu-fhir-ig-18262829358638533516.html Connect to Terminology Server at http://tx.fhir.org (00:28.375 / 01:52.616, 611Mb) Installing hl7.fhir.pubpack#0.2.3 to the package cache  Fetching:  Installing hl7.fhir.pubpack#0.2.3  done. Load Package hl7.fhir.pubpack#0.2.3 Installing hl7.fhir.xver-extensions#0.1.0 to the package cache  Fetching:  Installing hl7.fhir.xver-extensions#0.1.0  done. Load Package hl7.fhir.xver-extensions#0.1.0 Installing hl7.terminology.r4#5.5.0 to the package cache  Fetching:  Installing hl7.terminology.r4#5.5.0  done. Load Package hl7.terminology.r4#5.5.0 Installing hl7.fhir.uv.smart-app-launch#2.0.0 to the package cache  Fetching:  Installing hl7.fhir.uv.smart-app-launch#2.0.0  done. Load Package hl7.fhir.uv.smart-app-launch#2.0.0 Installing us.nlm.vsac#0.18.0 to the package cache  Fetching:  Installing us.nlm.vsac#0.18.0  done. Load Package us.nlm.vsac#0.18.0 Installing hl7.fhir.uv.sdc#3.0.0 to the package cache  Fetching:  Installing hl7.fhir.uv.sdc#3.0.0  done. Ignore Dependency on Core FHIR hl7.fhir.r4.examples#4.0.1, from package 'hl7.fhir.uv.sdc#3.0.0' (03:09.469 / 05:02.085, 930Mb) Load Package hl7.fhir.uv.sdc#3.0.0 Installing us.cdc.phinvads#0.12.0 to the package cache  Fetching:  Installing us.cdc.phinvads#0.12.0  done. Load Package us.cdc.phinvads#0.12.0 Installing hl7.fhir.uv.extensions.r4#5.1.0-snapshot1 to the package cache  Fetching:  Installing hl7.fhir.uv.extensions.r4#5.1.0  done. Load Package hl7.fhir.uv.extensions.r4#5.1.0 Load Package hl7.fhir.us.core#7.0.0 Installing hl7.fhir.us.core#6.1.0 to the package cache  Fetching:  Installing hl7.fhir.us.core#6.1.0  done. Installing hl7.terminology.r4#5.0.0 to the package cache  Fetching:  Installing hl7.terminology.r4#5.0.0  done. Load Package hl7.terminology.r4#5.0.0 Installing hl7.fhir.uv.extensions.r4#1.0.0 to the package cache  Fetching:  Installing hl7.fhir.uv.extensions.r4#1.0.0  done. Load Package hl7.fhir.uv.extensions.r4#1.0.0 Installing hl7.fhir.uv.bulkdata#2.0.0 to the package cache  Fetching:  Installing hl7.fhir.uv.bulkdata#2.0.0  done. Load Package hl7.fhir.uv.bulkdata#2.0.0 Installing hl7.fhir.uv.smart-app-launch#2.1.0 to the package cache  Fetching:  Installing hl7.fhir.uv.smart-app-launch#2.1.0  done. Load Package hl7.fhir.uv.smart-app-launch#2.1.0 Installing us.nlm.vsac#0.11.0 to the package cache  Fetching:  Installing us.nlm.vsac#0.11.0  done. Load Package us.nlm.vsac#0.11.0 Installing ihe.formatcode.fhir#1.1.0 to the package cache  Fetching:  Installing ihe.formatcode.fhir#1.1.0  done. Load Package ihe.formatcode.fhir#1.1.0 Load Package hl7.fhir.us.core#6.1.0 Load Package hl7.fhir.us.core.v610#6.1.0 Installing hl7.fhir.us.core#3.1.1 to the package cache  Fetching:  Installing hl7.fhir.us.core#3.1.1  done. Load Package hl7.fhir.us.core#3.1.1 Load Package hl7.fhir.us.core.3.1.1#3.1.1 Installing hl7.terminology.r4#6.1.0 to the package cache  Fetching:  Installing hl7.terminology.r4#6.1.0  done. Load Package hl7.terminology.r4#6.1.0 Installing hl7.fhir.us.core.v311#3.1.1 to the package cache  Fetching:  Installing hl7.fhir.us.core.v311#3.1.1  done. Load Package hl7.fhir.us.core.v311#3.1.1 Installing us.nlm.vsac#0.19.0 to the package cache  Fetching:  Installing us.nlm.vsac#0.19.0  done. Load Package us.nlm.vsac#0.19.0 Load Package hl7.fhir.us.davinci-hrex#1.1.0 Installing hl7.terminology.r4#6.2.0 to the package cache  Fetching:  Installing hl7.terminology.r4#6.2.0  done. Load Package hl7.terminology.r4#6.2.0 Load Package hl7.fhir.uv.extensions.r4#5.2.0 Installing us.nlm.vsac#0.21.0 to the package cache  Fetching:  Installing us.nlm.vsac#0.21.0  done. Load Package us.nlm.vsac#0.21.0 Load Package hl7.fhir.us.carin-bb#2.1.0 Load Package hl7.fhir.us.davinci-crd#2.1.0 Installing hl7.fhir.us.davinci-crd#2.0.0 to the package cache  Fetching:  Installing hl7.fhir.us.davinci-crd#2.0.0  done. Installing hl7.terminology.r4#5.3.0 to the package cache  Fetching:  Installing hl7.terminology.r4#5.3.0  done. Load Package hl7.terminology.r4#5.3.0 Installing hl7.fhir.us.davinci-hrex#1.0.0 to the package cache  Fetching:  Installing hl7.fhir.us.davinci-hrex#1.0.0  done. Installing hl7.fhir.us.udap-security#0.1.0 to the package cache  Fetching:  Installing hl7.fhir.us.udap-security#0.1.0  done. Load Package hl7.fhir.us.udap-security#0.1.0 Load Package hl7.fhir.us.davinci-hrex#1.0.0 Load Package hl7.fhir.us.davinci-crd#2.0.0 Installing hl7.fhir.uv.subscriptions-backport.r4#1.1.0 to the package cache  Fetching:  Installing hl7.fhir.uv.subscriptions-backport.r4#1.1.0  done. Ignore Dependency on Core FHIR hl7.fhir.r4.core#4.0.0, from package 'hl7.fhir.uv.subscriptions-backport.r4#1.1.0' (06:50.277 / 11:52.363, 2Gb) Load Package hl7.fhir.uv.subscriptions-backport.r4#1.1.0 Installing hl7.fhir.us.carin-bb#2.0.0 to the package cache  Fetching:  Installing hl7.fhir.us.carin-bb#2.0.0  done. Installing us.nlm.vsac#0.7.0 to the package cache  Fetching:  Installing us.nlm.vsac#0.7.0  done. Load Package us.nlm.vsac#0.7.0 Load Package hl7.fhir.us.carin-bb#2.0.0 Load Package hl7.fhir.us.davinci-pas#2.1.0 Load Package hl7.terminology.r4#6.3.0 Load Package hl7.fhir.us.davinci-pdex-plan-net#1.2.0 Installing hl7.fhir.us.davinci-cdex#2.1.0 to the package cache  Fetching:  Installing hl7.fhir.us.davinci-cdex#2.1.0  done. Load Package hl7.fhir.us.davinci-dtr#2.1.0 Load Package hl7.fhir.us.davinci-cdex#2.1.0 Load Package hl7.fhir.us.davinci-atr#2.1.0 Load Package hl7.fhir.us.davinci-pdex-plan-net#1.2.0 Installing hl7.fhir.us.udap-security#1.0.0 to the package cache  Fetching:  Installing hl7.fhir.us.udap-security#1.0.0  done. Installing hl7.terminology.r4#4.0.0 to the package cache  Fetching:  Installing hl7.terminology.r4#4.0.0  done. Load Package hl7.terminology.r4#4.0.0 Load Package hl7.fhir.us.udap-security#1.0.0 Installing ihe.iti.mcsd#3.8.x to the package cache  Fetching:  Installing ihe.iti.mcsd#3.8.0  done. Installing hl7.terminology.r4#3.1.0 to the package cache  Fetching:  Installing hl7.terminology.r4#3.1.0  done. Load Package hl7.terminology.r4#3.1.0 Installing ihe.iti.balp#1.1.0 to the package cache  Fetching:  Installing ihe.iti.balp#1.1.0  done. Load Package ihe.iti.balp#1.1.0 Load Package ihe.iti.mcsd#3.8.0 Load Package hl7.fhir.us.ndh#1.0.0 Load Package hl7.fhir.us.davinci-dtr#2.1.0 Load Package hl7.fhir.uv.extensions.r4#5.2.0 Load Package hl7.terminology.r4#6.3.0 Load Package hl7.fhir.uv.tools.r4#0.9.0 Load R5 Specials Installing hl7.fhir.r5.core#5.0.0 to the package cache  Fetching:  Installing hl7.fhir.r5.core#5.0.0  done. Cannot find or generate snapshot for base definition http://hl7.org/fhir/StructureDefinition/CanonicalResource from http://hl7.org/fhir/StructureDefinition/TestCases Initialization complete (05:15.281 / 17:07.644, 8Gb) Load IG (00:00.000 / 17:07.644, 8Gb) Load Content (00:00.003 / 17:07.648, 8Gb) Using en-US as the default narrative language. (no language information in Implementation Guide) (00:00.240 / 17:07.889, 8Gb) Process Loaded Resources (00:07.222 / 17:15.112, 1Gb) Generating Snapshots (00:02.404 / 17:17.517, 1Gb) Signing Certificate: RSA key for Subject: OU=IG Publisher, L=Ann Arbor, CN=hl7.org, O=HL7, ST=Missouri, C=us from: OU=IG Publisher, L=Ann Arbor, CN=hl7.org, O=HL7, ST=Missouri, C=us Fetch http://hl7.org/fhir/us/davinci-pdex/package-list.json for version check (00:05.560 / 17:23.077, 2Gb) Checking Language (00:00.159 / 17:23.237, 2Gb) Load Dependency Info (00:00.006 / 17:23.243, 2Gb) Load Info (00:00.002 / 17:23.245, 2Gb) Load Paths (00:00.001 / 17:23.246, 2Gb) Check R4 / R4B (00:00.000 / 17:23.247, 2Gb) Assign Comparison Ids (00:00.127 / 17:23.375, 2Gb) Propagating status (00:00.000 / 17:23.375, 2Gb) Generating Narratives (00:00.063 / 17:23.439, 2Gb) Validating Conformance Resources (00:10.563 / 17:34.003, 1Gb) Check profiles & code systems (02:26.873 / 20:00.876, 4Gb) Check realm rules (00:00.005 / 20:00.882, 4Gb) Installing hl7.fhir.us.core#9.0.0-ballot to the package cache  Fetching:  Installing hl7.fhir.us.core#9.0.0-ballot  done. US Core Comparisons Finished Previous Version Comparison (00:04.982 / 20:05.865, 4Gb) Installing hl7.fhir.us.davinci-pdex#2.1.0 to the package cache  Fetching:  Installing hl7.fhir.us.davinci-pdex#2.1.0  done. Installing hl7.fhir.r4.examples#4.0.1 to the package cache  Fetching:  Installing hl7.fhir.r4.examples#4.0.1  done. Installing hl7.fhir.uv.extensions#5.1.0-snapshot1 to the package cache  Fetching:  Installing hl7.fhir.uv.extensions#5.1.0-snapshot1  done. FHIR Version mismatch in package hl7.fhir.uv.extensions#5.1.0-snapshot1: version is 5.0.0 but must be 4.0.1 (path: hl7.fhir.us.davinci-pdex#2.1.0 -> hl7.fhir.us.core#7.0.0) Installing hl7.terminology.r5#5.3.0 to the package cache  Fetching:  Installing hl7.terminology.r5#5.3.0  done. FHIR Version mismatch in package hl7.terminology.r5#5.3.0: version is 5.0.0 but must be 4.0.1 (path: hl7.fhir.us.davinci-pdex#2.1.0 -> hl7.fhir.us.core#7.0.0 -> hl7.fhir.uv.extensions#5.1.0-snapshot1) FHIR Version mismatch in package hl7.fhir.uv.subscriptions-backport.r4#1.1.0: version is 4.0.0 but must be 4.0.1 (path: hl7.fhir.us.davinci-pdex#2.1.0 -> hl7.fhir.us.davinci-pas#2.1.0) Checking for Bundles to sign (04:11.484 / 24:17.349, 3Gb) Validating Resources (00:00.000 / 24:17.349, 3Gb) Processing Provenance Records (00:42.438 / 24:59.788, 3Gb) Generating Outputs in /scratch/repo/output (00:00.000 / 24:59.789, 3Gb) Generate Native Outputs (00:00.413 / 25:00.203, 3Gb) Run Template (00:15.716 / 25:15.920, 5Gb) **WARNING** Jira file generation will not be correct because multiple artifacts have the same name (ignoring content in "()"): Opt-Out Reason **WARNING** Jira file generation will not be correct because multiple artifacts have the same name (ignoring content in "()"): Opt-Out Reason **WARNING** Jira file generation will not be correct because multiple artifacts have the same name (ignoring content in "()"): Opt-Out Scope **WARNING** Jira file generation will not be correct because multiple artifacts have the same name (ignoring content in "()"): Treatment Relationship Type Generate HTML Outputs (00:07.834 / 25:23.754, 3Gb) Generate Spreadsheets (00:43.196 / 26:06.951, 3Gb) Generate Summaries (00:07.330 / 26:14.281, 6Gb) Generating Summary Outputs (00:00.000 / 26:14.281, 6Gb) Unable to find 3-character code having same country code as ISO 2-char code AA - User-assigned (00:27.785 / 26:42.067, 7Gb) Unable to find 3-character code having same country code as ISO 2-char code QM - User-assigned (00:00.000 / 26:42.067, 7Gb) Unable to find 3-character code having same country code as ISO 2-char code QN - User-assigned (00:00.000 / 26:42.067, 7Gb) Unable to find 3-character code having same country code as ISO 2-char code QO - User-assigned (00:00.000 / 26:42.067, 7Gb) Unable to find 3-character code having same country code as ISO 2-char code QP - User-assigned (00:00.000 / 26:42.067, 7Gb) Unable to find 3-character code having same country code as ISO 2-char code QQ - User-assigned (00:00.000 / 26:42.067, 7Gb) Unable to find 3-character code having same country code as ISO 2-char code QR - User-assigned (00:00.000 / 26:42.067, 7Gb) Unable to find 3-character code having same country code as ISO 2-char code QS - User-assigned (00:00.000 / 26:42.067, 7Gb) Unable to find 3-character code having same country code as ISO 2-char code QT - User-assigned (00:00.000 / 26:42.067, 7Gb) Unable to find 3-character code having same country code as ISO 2-char code QU - User-assigned (00:00.000 / 26:42.068, 7Gb) Unable to find 3-character code having same country code as ISO 2-char code QV - User-assigned (00:00.000 / 26:42.068, 7Gb) Unable to find 3-character code having same country code as ISO 2-char code QW - User-assigned (00:00.000 / 26:42.068, 7Gb) Unable to find 3-character code having same country code as ISO 2-char code QX - User-assigned (00:00.000 / 26:42.068, 7Gb) Unable to find 3-character code having same country code as ISO 2-char code QY - User-assigned (00:00.000 / 26:42.068, 7Gb) Unable to find 3-character code having same country code as ISO 2-char code QZ - User-assigned (00:00.000 / 26:42.068, 7Gb) Unable to find 3-character code having same country code as ISO 2-char code XA - User-assigned (00:00.000 / 26:42.068, 7Gb) Unable to find 3-character code having same country code as ISO 2-char code XB - User-assigned (00:00.000 / 26:42.068, 7Gb) Unable to find 3-character code having same country code as ISO 2-char code XC - User-assigned (00:00.000 / 26:42.068, 7Gb) Unable to find 3-character code having same country code as ISO 2-char code XD - User-assigned (00:00.000 / 26:42.068, 7Gb) Unable to find 3-character code having same country code as ISO 2-char code XE - User-assigned (00:00.000 / 26:42.068, 7Gb) Unable to find 3-character code having same country code as ISO 2-char code XF - User-assigned (00:00.000 / 26:42.068, 7Gb) Unable to find 3-character code having same country code as ISO 2-char code XG - User-assigned (00:00.000 / 26:42.068, 7Gb) Unable to find 3-character code having same country code as ISO 2-char code XH - User-assigned (00:00.000 / 26:42.068, 7Gb) Unable to find 3-character code having same country code as ISO 2-char code XI - User-assigned (00:00.000 / 26:42.068, 7Gb) Unable to find 3-character code having same country code as ISO 2-char code XJ - User-assigned (00:00.000 / 26:42.068, 7Gb) Unable to find 3-character code having same country code as ISO 2-char code XK - Kosovo (00:00.000 / 26:42.068, 7Gb) Unable to find 3-character code having same country code as ISO 2-char code XL - User-assigned (00:00.000 / 26:42.068, 7Gb) Unable to find 3-character code having same country code as ISO 2-char code XM - User-assigned (00:00.000 / 26:42.068, 7Gb) Unable to find 3-character code having same country code as ISO 2-char code XN - User-assigned (00:00.000 / 26:42.068, 7Gb) Unable to find 3-character code having same country code as ISO 2-char code XO - User-assigned (00:00.000 / 26:42.068, 7Gb) Unable to find 3-character code having same country code as ISO 2-char code XP - User-assigned (00:00.000 / 26:42.068, 7Gb) Unable to find 3-character code having same country code as ISO 2-char code XQ - User-assigned (00:00.000 / 26:42.068, 7Gb) Unable to find 3-character code having same country code as ISO 2-char code XR - User-assigned (00:00.000 / 26:42.068, 7Gb) Unable to find 3-character code having same country code as ISO 2-char code XS - User-assigned (00:00.000 / 26:42.068, 7Gb) Unable to find 3-character code having same country code as ISO 2-char code XT - User-assigned (00:00.000 / 26:42.068, 7Gb) Unable to find 3-character code having same country code as ISO 2-char code XU - User-assigned (00:00.000 / 26:42.068, 7Gb) Unable to find 3-character code having same country code as ISO 2-char code XV - User-assigned (00:00.000 / 26:42.068, 7Gb) Unable to find 3-character code having same country code as ISO 2-char code XW - User-assigned (00:00.000 / 26:42.068, 7Gb) Unable to find 3-character code having same country code as ISO 2-char code XX - Unknown (00:00.000 / 26:42.068, 7Gb) Unable to find 3-character code having same country code as ISO 2-char code XY - User-assigned (00:00.000 / 26:42.068, 7Gb) Unable to find 3-character code having same country code as ISO 2-char code XZ - International Waters (00:00.000 / 26:42.068, 7Gb) Unable to find 3-character code having same country code as ISO 2-char code ZZ - Unknown or Invalid Territory (00:00.000 / 26:42.068, 7Gb) DB Cumulative Time invested: 00:00:05.988 Sending Usage Stats to Server (00:00.377 / 26:42.445, 7Gb) ## Memory (MB): Use = 7485, Free = 11522, Total = 19008, Max = 19008 (00:00.008 / 26:42.454, 7Gb) Reclaiming memory... (00:00.000 / 26:42.454, 7Gb) ## Memory (MB): Use = 3496, Free = 15511, Total = 19008, Max = 19008 (00:03.946 / 26:46.400, 3Gb) Run jekyll: jekyll build --destination "/scratch/repo/output" (in folder /scratch/repo/temp/pages) (00:00.001 / 26:46.402, 3Gb) Troubleshooting Note: usual cases for Jekyll to fail are: (00:00.000 / 26:46.402, 3Gb) * A failure to produce a fragment that is already logged in the output above (00:00.000 / 26:46.402, 3Gb) * A reference to a manually edited file that hasn't been provided (00:00.000 / 26:46.402, 3Gb) Jekyll: Source: /scratch/repo/temp/pages (00:00.525 / 26:46.928, 3Gb) Jekyll: Generating... (00:00.000 / 26:46.928, 3Gb) Jekyll: done in 8.287 seconds. (00:08.286 / 26:55.214, 3Gb) Checking Output HTML (00:06.955 / 27:02.170, 6Gb) Processed /scratch/repo/output - % reduction = 99 (118890289 ==> 2298869) found 2824 files (00:04.578 / 27:06.748, 9Gb) ........................................ ........................................ ... 2824 html files, 0 pages invalid xhtml (0%) (01:09.682 / 28:16.431, 3Gb) ... 511367 links, 14 broken links (0%) (00:00.000 / 28:16.431, 3Gb) Generate fragment-usage-analysis.csv (00:00.000 / 28:16.431, 3Gb) Build final .zip (00:00.016 / 28:16.447, 3Gb) Final .zip built (00:05.764 / 28:22.211, 3Gb) Built. Times: loading: 00:15.588, generate: 11:09.910, propagating status: 00:00.063, narrative generation: 00:10.562, realm-rules: 00:04.982, previous-version: 04:11.431, jekyll: 00:08.856, validation: 03:08.725 (#172), template: 00:08.451 (#3) (00:10.935 / 28:33.147, 6Gb) Generating QA (00:00.000 / 28:33.147, 6Gb) Validation output in /scratch/repo/output/qa.html Errors: 109, Warnings: 37, Info: 61, Broken Links: 14 (00:01.353 / 28:34.501, 6Gb) Finished @ 12/18/25, 3:51 AM. Max Memory Used = 9Gb (00:00.093 / 28:34.595, 6Gb)