INFO:root:about to clone! DEBUG:root:running: git clone --recursive https://github.com/HL7/cdmh --branch master repo DEBUG:root:Time to deadline 35879.99835 seconds Cloning into 'repo'... DEBUG:root:running: wget -q https://github.com/HL7/fhir-ig-publisher/releases/latest/download/publisher.jar -O publisher.jar DEBUG:root:Time to deadline 35877.077504 seconds DEBUG:root:running: npm -g install fsh-sushi DEBUG:root:Time to deadline 35875.609409 seconds /usr/local/bin/sushi -> /usr/local/lib/node_modules/fsh-sushi/dist/app.js npm WARN optional SKIPPING OPTIONAL DEPENDENCY: fsevents@2.3.2 (node_modules/fsh-sushi/node_modules/fsevents): npm WARN notsup SKIPPING OPTIONAL DEPENDENCY: Unsupported platform for fsevents@2.3.2: wanted {"os":"darwin","arch":"any"} (current: {"os":"linux","arch":"x64"}) + fsh-sushi@2.2.1 added 901 packages from 558 contributors in 9.816s DEBUG:root:running: java -Xms19000m -Xmx19000m -jar ../publisher.jar -ig ig.json -api-key-file /etc/ig.builder.keyfile.ini -auto-ig-build -tx http://tx.fhir.org/r4 -target https://build.fhir.org/ig/HL7/cdmh/ -out /scratch/ig-build-temp-BQPR8U/repo DEBUG:root:Time to deadline 35865.468659 seconds FHIR IG Publisher Version 1.1.90 (Git# 9633e099796f). Built 2021-12-03T10:51:17.791Z (3 days old) Detected Java version: 11.0.9 from /usr/local/openjdk-11 on Linux/amd64 (64bit). 18366MB available dir = /scratch/ig-build-temp-BQPR8U/repo, path = /usr/local/rvm/bin:/usr/local/rvm/rubies/ruby-2.5.1/bin:/usr/local/openjdk-11/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin Parameters: -ig ig.json -api-key-file /etc/ig.builder.keyfile.ini -auto-ig-build -tx http://tx.fhir.org/r4 -target https://build.fhir.org/ig/HL7/cdmh/ -out /scratch/ig-build-temp-BQPR8U/repo Start Clock @ Monday, December 6, 2021 at 3:52:29 PM Coordinated Universal Time (2021-12-06T15:52:29Z) API keys loaded from /etc/ig.builder.keyfile.ini (00:00.0004) Package Cache: var/lib/.fhir/packages (00:00.0006) Load Template from hl7.fhir.template (00:00.0589) 2021-12-06 15:52:30.521 [main] INFO o.h.f.u.n.FilesystemPackageCacheManager [FilesystemPackageCacheManager.java:234] Failed to determine latest version of package hl7.fhir.template from server: http://packages.fhir.org 2021-12-06 15:52:31.287 [main] INFO o.h.f.u.npm.BasePackageCacheManager [BasePackageCacheManager.java:80] Failed to resolve package hl7.fhir.template#0.3.3 from server: http://packages.fhir.org (http://packages.fhir.org/hl7.fhir.template/0.3.3) Installing hl7.fhir.template#0.3.3 to the package cache Fetching: Installing: done. Load Template from hl7.base.template#0.3.2 (00:02.0429) 2021-12-06 15:52:32.303 [main] INFO o.h.f.u.npm.BasePackageCacheManager [BasePackageCacheManager.java:80] Failed to resolve package hl7.base.template#0.3.2 from server: http://packages.fhir.org (http://packages.fhir.org/hl7.base.template/0.3.2) Installing hl7.base.template#0.3.2 to the package cache Fetching: Installing: done. Load Template from fhir.base.template#0.2.2 (00:03.0399) 2021-12-06 15:52:33.235 [main] INFO o.h.f.u.npm.BasePackageCacheManager [BasePackageCacheManager.java:80] Failed to resolve package fhir.base.template#0.2.2 from server: http://packages.fhir.org (http://packages.fhir.org/fhir.base.template/0.2.2) Installing fhir.base.template#0.2.2 to the package cache Fetching:. Installing: . done. onLoad.findSpreadsheets: onLoad.updateIg: [xslt] Processing /scratch/ig-build-temp-BQPR8U/repo/template/onLoad-ig-working.xml to /scratch/ig-build-temp-BQPR8U/repo/template/onLoad-ig-updated.xml [xslt] Loading stylesheet /scratch/ig-build-temp-BQPR8U/repo/template/scripts/onLoad.xslt onLoad.extend: onLoad: Root directory: /scratch/ig-build-temp-BQPR8U/repo (00:06.0550) Core Package hl7.fhir.r4.core#4.0.1 Installing hl7.fhir.r4.core#4.0.1 to the package cache Fetching:.................................................................................................... Installing: .................................................................................................... done. Terminology Cache is at /scratch/ig-build-temp-BQPR8U/repo/input-cache/txcache. Trimming now (00:15.0955) Connect to Terminology Server at http://tx.fhir.org/r4 (00:15.0958) Installing hl7.fhir.pubpack#0.0.9 to the package cache Fetching:......... Installing: ......... done. Load Package hl7.fhir.pubpack#0.0.9 Installing hl7.fhir.xver-extensions#0.0.8 to the package cache Fetching: Installing: done. Load Package hl7.fhir.xver-extensions#0.0.8 Installing hl7.terminology.r4#3.0.0 to the package cache Fetching:............................................................................ Installing: ............................................................................ done. Load Package hl7.terminology.r4#3.0.0 Installing hl7.fhir.us.core#4.0.0 to the package cache Fetching:..... Installing: ..... done. Installing hl7.fhir.uv.bulkdata#1.0.1 to the package cache Fetching: Installing: done. Load Package hl7.fhir.uv.bulkdata#1.0.1 Installing us.nlm.vsac#0.3.0 to the package cache Fetching:............................................................................................................ ...................................................................... Installing: ........................................................................................................................ .......................................................... done. Load Package us.nlm.vsac#0.3.0 Load Package hl7.fhir.us.core#4.0.0 Initialization complete (00:37.0150) Fetch http://hl7.org/fhir/us/cdmh/package-list.json for version check (00:37.0151) Load Content (00:37.0256) loadPrePages from FetchedFile[/scratch/ig-build-temp-BQPR8U/repo/input/includes] as /scratch/ig-build-temp-BQPR8U/repo/input/includes loadPrePages from FetchedFile[/scratch/ig-build-temp-BQPR8U/repo/input/pagecontent] as /scratch/ig-build-temp-BQPR8U/repo/input/pagecontent Processing Conformance Resources (00:38.0381) Generating Snapshots (00:38.0670) Generating Narratives (00:39.0204) Validating Conformance Resources (01:01.0781) 2021-12-06 15:53:37.169 [main] INFO o.h.f.u.npm.BasePackageCacheManager [BasePackageCacheManager.java:80] Failed to resolve package hl7.fhir.us.core#4.1.0 from server: http://packages.fhir.org (http://packages.fhir.org/hl7.fhir.us.core/4.1.0) 2021-12-06 15:53:37.289 [main] INFO o.h.f.u.npm.BasePackageCacheManager [BasePackageCacheManager.java:80] Failed to resolve package hl7.fhir.us.core#4.1.0 from server: https://packages2.fhir.org/packages (https://packages2.fhir.org/packages/hl7.fhir.us.core/4.1.0) 2021-12-06 15:53:37.701 [main] INFO o.h.f.u.npm.BasePackageCacheManager [BasePackageCacheManager.java:80] Failed to resolve package hl7.fhir.us.core#4.1.x from server: http://packages.fhir.org (http://packages.fhir.org/hl7.fhir.us.core/4.1.x) 2021-12-06 15:53:39.285 [main] INFO o.h.f.u.npm.BasePackageCacheManager [BasePackageCacheManager.java:80] Failed to resolve package hl7.fhir.us.core#4.1.x from server: https://packages2.fhir.org/packages (https://packages2.fhir.org/packages/hl7.fhir.us.core/4.1.x) Installing hl7.fhir.us.core#4.1.0 to the package cache Fetching:...... Installing: ...... done. US Core Comparisons Finished Installing hl7.fhir.us.cdmh#0.1.0 to the package cache Fetching: Installing: done. Installing hl7.fhir.r4.core#4.0.1 to the package cache Fetching:.................................................................................................... Installing: .................................................................................................... done. -tx: Connect to http://tx.fhir.org/r4 Validating Resources (01:16.0072) Processing Provenance Records (01:19.0637) Generating Outputs in /scratch/ig-build-temp-BQPR8U/repo/output (01:19.0637) onGenerate.checkVersions: [xslt] Processing /scratch/ig-build-temp-BQPR8U/repo/template/onGenerate-ig-working.xml to /scratch/ig-build-temp-BQPR8U/repo/template/versions.txt [xslt] Loading stylesheet /scratch/ig-build-temp-BQPR8U/repo/template/scripts/onGenerate.getVersions.xslt [mkdir] Created dir: /scratch/ig-build-temp-BQPR8U/repo/input-cache/schemas onGenerate.r5-schemas: [mkdir] Created dir: /scratch/ig-build-temp-BQPR8U/repo/input-cache/schemas/R5 [get] Getting: http://build.fhir.org/fhir-single.xsd [get] To: /scratch/ig-build-temp-BQPR8U/repo/input-cache/schemas/R5/fhir-single.xsd [get] Getting: http://build.fhir.org/fhir-xhtml.xsd [get] To: /scratch/ig-build-temp-BQPR8U/repo/input-cache/schemas/R5/fhir-xhtml.xsd [get] Getting: http://build.fhir.org/xml.xsd [get] To: /scratch/ig-build-temp-BQPR8U/repo/input-cache/schemas/R5/xml.xsd [get] Getting: http://build.fhir.org/xmldsig-core-schema.xsd [get] To: /scratch/ig-build-temp-BQPR8U/repo/input-cache/schemas/R5/xmldsig-core-schema.xsd onGenerate.r4-schemas: [mkdir] Created dir: /scratch/ig-build-temp-BQPR8U/repo/input-cache/schemas/R4 [get] Getting: http://hl7.org/fhir/R4/fhir-single.xsd [get] To: /scratch/ig-build-temp-BQPR8U/repo/input-cache/schemas/R4/fhir-single.xsd [get] Getting: http://hl7.org/fhir/R4/fhir-xhtml.xsd [get] To: /scratch/ig-build-temp-BQPR8U/repo/input-cache/schemas/R4/fhir-xhtml.xsd [get] Getting: http://hl7.org/fhir/R4/xml.xsd [get] To: /scratch/ig-build-temp-BQPR8U/repo/input-cache/schemas/R4/xml.xsd [get] Getting: http://hl7.org/fhir/R4/xmldsig-core-schema.xsd [get] To: /scratch/ig-build-temp-BQPR8U/repo/input-cache/schemas/R4/xmldsig-core-schema.xsd onGenerate.r3-schemas: onGenerate.r2b-schemas: onGenerate.r2-schemas: onGenerate.schemas: onGenerate.data: [xslt] Processing /scratch/ig-build-temp-BQPR8U/repo/template/onGenerate-ig-working.xml to /scratch/ig-build-temp-BQPR8U/repo/temp/pages/_data/artifacts.json [xslt] Loading stylesheet /scratch/ig-build-temp-BQPR8U/repo/template/scripts/onGenerate.data.xslt onGenerate.setup: onGenerate.infoFile: [xslt] Processing /scratch/ig-build-temp-BQPR8U/repo/template/onGenerate-ig-working.xml to /scratch/ig-build-temp-BQPR8U/repo/temp/pages/_data/info.json [xslt] Loading stylesheet /scratch/ig-build-temp-BQPR8U/repo/template/scripts/onGenerate.genJson.xslt onGenerate.processIncludes: [copy] Copying 13 files to /scratch/ig-build-temp-BQPR8U/repo/temp/pages/_includes onGenerate.processIg: [xslt] Processing /scratch/ig-build-temp-BQPR8U/repo/template/onGenerate-ig-working.xml to /scratch/ig-build-temp-BQPR8U/repo/template/onGenerate-ig-working.1.xml [xslt] Loading stylesheet /scratch/ig-build-temp-BQPR8U/repo/template/scripts/onGenerate.group.xslt [xslt] Processing /scratch/ig-build-temp-BQPR8U/repo/template/onGenerate-ig-working.1.xml to /scratch/ig-build-temp-BQPR8U/repo/template/onGenerate-ig-updated.xml [xslt] Loading stylesheet /scratch/ig-build-temp-BQPR8U/repo/template/scripts/onGenerate.final.xslt onGenerate.igQa: [xslt] Processing /scratch/ig-build-temp-BQPR8U/repo/template/onGenerate-ig-updated.xml to /scratch/ig-build-temp-BQPR8U/repo/template/ongenerate-validation-igqa.json [xslt] Loading stylesheet /scratch/ig-build-temp-BQPR8U/repo/template/scripts/onGenerate.qa.xslt onGenerate.artifactList: [xslt] Processing /scratch/ig-build-temp-BQPR8U/repo/template/onGenerate-ig-updated.xml to /scratch/ig-build-temp-BQPR8U/repo/temp/pages/_includes/artifacts.xml [xslt] Loading stylesheet /scratch/ig-build-temp-BQPR8U/repo/template/scripts/createArtifactSummary.xslt check-plantumlfiles: onGenerate.plantUml.ig: onGenerate.plantUml.template: onGenerate.plantUml: onGenerate.copyDataFiles: onGenerate.jira.setup: [xslt] Processing /scratch/ig-build-temp-BQPR8U/repo/template/onGenerate-ig-updated.xml to /scratch/ig-build-temp-BQPR8U/repo/template/properties.txt [xslt] Loading stylesheet /scratch/ig-build-temp-BQPR8U/repo/template/scripts/onGenerate.genProperties.xslt [get] Getting: https://github.com/HL7/JIRA-Spec-Artifacts/raw/master/xml/_workgroups.xml [get] To: /scratch/ig-build-temp-BQPR8U/repo/input-cache/workgroups.xml [get] https://github.com/HL7/JIRA-Spec-Artifacts/raw/master/xml/_workgroups.xml moved to https://raw.githubusercontent.com/HL7/JIRA-Spec-Artifacts/master/xml/_workgroups.xml [get] Getting: https://github.com/HL7/JIRA-Spec-Artifacts/raw/master/xml/FHIR-us-cdmh.xml [get] To: /scratch/ig-build-temp-BQPR8U/repo/input-cache/jiraspec.xml [get] https://github.com/HL7/JIRA-Spec-Artifacts/raw/master/xml/FHIR-us-cdmh.xml moved to https://raw.githubusercontent.com/HL7/JIRA-Spec-Artifacts/master/xml/FHIR-us-cdmh.xml onGenerate.jira.generate: [xslt] Processing /scratch/ig-build-temp-BQPR8U/repo/template/package-list.tmp.xml to /scratch/ig-build-temp-BQPR8U/repo/template/package-list.xml [xslt] Loading stylesheet /scratch/ig-build-temp-BQPR8U/repo/template/scripts/onGenerate.package-list.xslt [xslt] Processing /scratch/ig-build-temp-BQPR8U/repo/template/jira.tmp.xml to /scratch/ig-build-temp-BQPR8U/repo/template/jira.xml [xslt] Loading stylesheet /scratch/ig-build-temp-BQPR8U/repo/template/scripts/onGenerate.jira.xslt [xslt] : Warning! The source document is in no namespace, but the template rules all expect elements in a namespace [xslt] Processing /scratch/ig-build-temp-BQPR8U/repo/template/jira.xml to /scratch/ig-build-temp-BQPR8U/repo/template/jira-new.xml [xslt] Loading stylesheet /scratch/ig-build-temp-BQPR8U/repo/template/scripts/onGenerate.normalize.xslt [xslt] Processing /scratch/ig-build-temp-BQPR8U/repo/input-cache/jiraspec.xml to /scratch/ig-build-temp-BQPR8U/repo/template/jira-current.xml [xslt] Loading stylesheet /scratch/ig-build-temp-BQPR8U/repo/template/scripts/onGenerate.normalize.xslt onGenerate.jira.check: onGenerate.jira.skip-offline: onGenerate.jira.skip-missing: onGenerate.jira: onGenerate.extend: onGenerate: Generating Summary Outputs (01:39.0667) Sending Usage Stats to Server (01:39.0957) ## Memory (MB): Use = 5209, Free = 13136, Total = 18366, Max =18366 Reclaiming memory... ## Memory (MB): Use = 2184, Free = 16182, Total = 18366, Max =18366 Run jekyll: jekyll build --destination "/scratch/ig-build-temp-BQPR8U/repo/output" (in folder /scratch/ig-build-temp-BQPR8U/repo/temp/pages) (01:43.0308) Jekyll: Source: /scratch/ig-build-temp-BQPR8U/repo/temp/pages (01:43.0684) Jekyll: Generating... (01:43.0684) Jekyll: done in 2.645 seconds. (01:46.0329) Checking Output HTML (01:47.0326) found 1761 files (01:47.0333) ........................................ ........................................ ... 1761 html files, 0 pages invalid xhtml (0%) (01:57.0433) ... 233733 links, 0 broken links (0%) (01:57.0433) Build final .zip (01:57.0433) Final .zip built (01:59.0500) Finished. Times: loading: 00:01.0124, generate: 01:21.0662, narrative generation: 00:22.0576, realm-rules: 00:03.0826, previous-version: 00:05.0077, jekyll: 00:03.0056, validation: 00:08.0839 (#124), template: 00:02.0724 (#3) (02:00.0048) Validation output in /scratch/ig-build-temp-BQPR8U/repo/output/qa.html Errors: 0, Warnings: 0, Info: 0, Broken Links = 0 (02:00.0331) Done (02:00.0332)